RNA–Protein interactions for RNA: ENST00000638223.1

KCNMA1-228, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene KCNMA1, Length 4,340 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-228ENST00000638223 NME9Q86XW9 330 aa12.46□□□□□ -0.42
KCNMA1-228ENST00000638223 DUOX2Q9NRD8 1548 aa12.45□□□□□ -0.42
KCNMA1-228ENST00000638223 GORABQ5T7V8 394 aa12.45□□□□□ -0.42
KCNMA1-228ENST00000638223 RWDD1Q9H446 243 aaPredicted RBP12.45□□□□□ -0.42
KCNMA1-228ENST00000638223 ADAMTS2O95450 1211 aa12.45□□□□□ -0.42
KCNMA1-228ENST00000638223 COG6Q9Y2V7 657 aa12.44□□□□□ -0.42
KCNMA1-228ENST00000638223 RPRD2Q5VT52 1461 aaKnown RBP12.44□□□□□ -0.42
KCNMA1-228ENST00000638223 NAP1L2Q9ULW6 460 aaPredicted RBP12.44□□□□□ -0.42
KCNMA1-228ENST00000638223 ZBED9Q6R2W3 1325 aa12.44□□□□□ -0.42
KCNMA1-228ENST00000638223 FKBP5Q13451 457 aaPredicted RBP12.43□□□□□ -0.42
KCNMA1-228ENST00000638223 DMRT2Q9Y5R5 561 aa12.43□□□□□ -0.42
KCNMA1-228ENST00000638223 NSD3Q9BZ95 1437 aa12.43□□□□□ -0.42
KCNMA1-228ENST00000638223 ITSN2Q9NZM3 1697 aa12.43□□□□□ -0.42
KCNMA1-228ENST00000638223 FAM135AQ9P2D6 1515 aa12.43□□□□□ -0.42
KCNMA1-228ENST00000638223 TATP17735 454 aaPredicted RBP12.43□□□□□ -0.42
KCNMA1-228ENST00000638223 AIMP1Q12904 312 aaKnown RBP12.43□□□□□ -0.42
KCNMA1-228ENST00000638223 GNAI1P63096 354 aa12.42□□□□□ -0.42
KCNMA1-228ENST00000638223 CCDC184Q52MB2 194 aa12.42□□□□□ -0.42
KCNMA1-228ENST00000638223 PLEKHO1Q53GL0 409 aaPredicted RBP12.42□□□□□ -0.42
KCNMA1-228ENST00000638223 ZKSCAN2Q63HK3 967 aa12.42□□□□□ -0.42
KCNMA1-228ENST00000638223 HMMRO75330 724 aa12.42□□□□□ -0.42
KCNMA1-228ENST00000638223 BECN1Q14457 450 aa12.42□□□□□ -0.42
KCNMA1-228ENST00000638223 TMX4Q9H1E5 349 aaPredicted RBP12.42□□□□□ -0.42
KCNMA1-228ENST00000638223 NCKAP5LQ9HCH0 1330 aa12.42□□□□□ -0.42
KCNMA1-228ENST00000638223 NBR1Q14596 966 aa12.42□□□□□ -0.42
KCNMA1-228ENST00000638223 TPRNQ4KMQ1 711 aa12.42□□□□□ -0.42
KCNMA1-228ENST00000638223 ZNF530Q6P9A1 599 aaPredicted RBP12.42□□□□□ -0.42
KCNMA1-228ENST00000638223 HDAC5Q9UQL6 1122 aa12.42□□□□□ -0.42
KCNMA1-228ENST00000638223 ADCY10Q96PN6 1610 aa12.41□□□□□ -0.42
KCNMA1-228ENST00000638223 NEXNQ0ZGT2 675 aa12.41□□□□□ -0.42
KCNMA1-228ENST00000638223 CDCA7LQ96GN5 454 aa12.41□□□□□ -0.42
KCNMA1-228ENST00000638223 BRD4O60885 1362 aaPredicted RBP12.41□□□□□ -0.42
KCNMA1-228ENST00000638223 MAGI3Q5TCQ9 1506 aa12.41□□□□□ -0.42
KCNMA1-228ENST00000638223 GAS2L2Q8NHY3 880 aa12.41□□□□□ -0.42
KCNMA1-228ENST00000638223 RIMBP3CA6NJZ7 1639 aa12.4□□□□□ -0.42
KCNMA1-228ENST00000638223 RIMBP3BA6NNM3 1639 aa12.4□□□□□ -0.42
KCNMA1-228ENST00000638223 RIMBP3Q9UFD9 1639 aa12.4□□□□□ -0.42
KCNMA1-228ENST00000638223 C9orf78Q9NZ63 289 aaPredicted RBP12.4□□□□□ -0.42
KCNMA1-228ENST00000638223 CADPS2Q86UW7 1296 aa12.4□□□□□ -0.42
KCNMA1-228ENST00000638223 RBM42Q9BTD8 480 aaKnown RBP12.4□□□□□ -0.42
KCNMA1-228ENST00000638223 RIMS2Q9UQ26 1411 aa12.39□□□□□ -0.43
KCNMA1-228ENST00000638223 KRT28Q7Z3Y7 464 aa12.39□□□□□ -0.43
KCNMA1-228ENST00000638223 TCOF1Q13428 1488 aaKnown RBP12.39□□□□□ -0.43
KCNMA1-228ENST00000638223 FRAT2O75474 233 aaPredicted RBP12.38□□□□□ -0.43
KCNMA1-228ENST00000638223 EMILIN1Q9Y6C2 1016 aa12.38□□□□□ -0.43
KCNMA1-228ENST00000638223 UBAP1LF5GYI3 381 aa12.38□□□□□ -0.43
KCNMA1-228ENST00000638223 FBLN1P23142 703 aa12.38□□□□□ -0.43
KCNMA1-228ENST00000638223 EXOC6Q8TAG9 804 aa12.38□□□□□ -0.43
KCNMA1-228ENST00000638223 KCNA6P17658 529 aa12.38□□□□□ -0.43
KCNMA1-228ENST00000638223 USHBP1Q8N6Y0 703 aa12.38□□□□□ -0.43
KCNMA1-228ENST00000638223 TRIM6-TRIM34B2RNG4 842 aa12.37□□□□□ -0.43
KCNMA1-228ENST00000638223 G3V3G9 751 aa12.37□□□□□ -0.43
KCNMA1-228ENST00000638223 DCAF8Q5TAQ9 597 aa12.37□□□□□ -0.43
KCNMA1-228ENST00000638223 ISY1Q9ULR0 285 aaKnown RBP12.37□□□□□ -0.43
KCNMA1-228ENST00000638223 ATP10AO60312 1499 aa12.37□□□□□ -0.43
KCNMA1-228ENST00000638223 SMG6Q86US8 1419 aaKnown RBP12.37□□□□□ -0.43
KCNMA1-228ENST00000638223 YEATS2Q9ULM3 1422 aa12.37□□□□□ -0.43
KCNMA1-228ENST00000638223 TSR2Q969E8 191 aaKnown RBP12.37□□□□□ -0.43
KCNMA1-228ENST00000638223 CRBNQ96SW2 442 aa12.37□□□□□ -0.43
KCNMA1-228ENST00000638223 KLHL34Q8N239 644 aa12.37□□□□□ -0.43
KCNMA1-228ENST00000638223 KCNH5Q8NCM2 988 aa12.37□□□□□ -0.43
KCNMA1-228ENST00000638223 ACEP12821 1306 aa12.37□□□□□ -0.43
KCNMA1-228ENST00000638223 ZNF428Q96B54 188 aa12.36□□□□□ -0.43
KCNMA1-228ENST00000638223 FAM177BA6PVY3 158 aa12.36□□□□□ -0.43
KCNMA1-228ENST00000638223 DDX58O95786 925 aaKnown RBP12.36□□□□□ -0.43
KCNMA1-228ENST00000638223 RRP1P56182 461 aaKnown RBP12.36□□□□□ -0.43
KCNMA1-228ENST00000638223 PNISRQ8TF01 805 aaKnown RBP12.36□□□□□ -0.43
KCNMA1-228ENST00000638223 EXOSC9Q06265 439 aaKnown RBP12.36□□□□□ -0.43
KCNMA1-228ENST00000638223 SCAF11Q99590 1463 aaKnown RBP12.35□□□□□ -0.43
KCNMA1-228ENST00000638223 CHRNA2Q15822 529 aa12.35□□□□□ -0.43
KCNMA1-228ENST00000638223 NGLY1Q96IV0 654 aa12.35□□□□□ -0.43
KCNMA1-228ENST00000638223 KIAA1211Q6ZU35 1233 aa12.35□□□□□ -0.43
KCNMA1-228ENST00000638223 DZIP1LQ8IYY4 767 aaKnown RBP12.35□□□□□ -0.43
KCNMA1-228ENST00000638223 DDRGK1Q96HY6 314 aa12.35□□□□□ -0.43
KCNMA1-228ENST00000638223 API5Q9BZZ5 524 aaKnown RBP12.35□□□□□ -0.43
KCNMA1-228ENST00000638223 RIC3Q7Z5B4 369 aa12.35□□□□□ -0.43
KCNMA1-228ENST00000638223 DNAJC5Q9H3Z4 198 aa12.35□□□□□ -0.43
KCNMA1-228ENST00000638223 THUMPD2Q9BTF0 503 aaKnown RBP12.34□□□□□ -0.43
KCNMA1-228ENST00000638223 CABP4P57796 275 aa12.34□□□□□ -0.43
KCNMA1-228ENST00000638223 ATP7AQ04656 1500 aa12.34□□□□□ -0.43
KCNMA1-228ENST00000638223 ZCCHC11Q5TAX3 1644 aaKnown RBP12.33□□□□□ -0.44
KCNMA1-228ENST00000638223 EIF5BO60841 1220 aaKnown RBP12.33□□□□□ -0.44
KCNMA1-228ENST00000638223 MSH6P52701 1360 aa12.33□□□□□ -0.44
KCNMA1-228ENST00000638223 DISP3Q9P2K9 1392 aa12.33□□□□□ -0.44
KCNMA1-228ENST00000638223 ANKRD45Q5TZF3 282 aa12.33□□□□□ -0.44
KCNMA1-228ENST00000638223 SPG7Q9UQ90 795 aa12.33□□□□□ -0.44
KCNMA1-228ENST00000638223 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.32□□□□□ -0.44
KCNMA1-228ENST00000638223 PANK1Q8TE04 598 aa12.32□□□□□ -0.44
KCNMA1-228ENST00000638223 NEO1Q92859 1461 aa12.32□□□□□ -0.44
KCNMA1-228ENST00000638223 SHANK2Q9UPX8 1470 aa12.32□□□□□ -0.44
KCNMA1-228ENST00000638223 DCTN1Q14203 1278 aa12.31□□□□□ -0.44
KCNMA1-228ENST00000638223 TWISTNBQ3B726 338 aaPredicted RBP12.31□□□□□ -0.44
KCNMA1-228ENST00000638223 GPATCH3Q96I76 525 aa12.31□□□□□ -0.44
KCNMA1-228ENST00000638223 TOM1O60784 492 aa12.31□□□□□ -0.44
KCNMA1-228ENST00000638223 HSP90AB1P08238 724 aaKnown RBP12.31□□□□□ -0.44
KCNMA1-228ENST00000638223 HDGFL1Q5TGJ6 251 aa12.31□□□□□ -0.44
KCNMA1-228ENST00000638223 SPRYD3Q8NCJ5 442 aa12.31□□□□□ -0.44
KCNMA1-228ENST00000638223 CFAP65Q6ZU64 1925 aaKnown RBP12.3□□□□□ -0.44
KCNMA1-228ENST00000638223 MCCP23508 829 aa12.3□□□□□ -0.44
KCNMA1-228ENST00000638223 ERICH6BQ5W0A0 696 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms