RNA–Protein interactions for RNA: ENST00000636964.1

CLN6-217, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 3,335 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-217ENST00000636964 QRICH2Q9H0J4 1663 aa15.39■□□□□ 0.05
CLN6-217ENST00000636964 CABP2Q9NPB3 220 aa15.38■□□□□ 0.05
CLN6-217ENST00000636964 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.38■□□□□ 0.05
CLN6-217ENST00000636964 MYO3AQ8NEV4 1616 aa15.38■□□□□ 0.05
CLN6-217ENST00000636964 PRAM1Q96QH2 718 aa15.38■□□□□ 0.05
CLN6-217ENST00000636964 RIMS2Q9UQ26 1411 aa15.37■□□□□ 0.05
CLN6-217ENST00000636964 POGKQ9P215 609 aa15.37■□□□□ 0.05
CLN6-217ENST00000636964 MINK1Q8N4C8 1332 aaPredicted RBP15.37■□□□□ 0.05
CLN6-217ENST00000636964 ASXL1Q8IXJ9 1541 aa15.37■□□□□ 0.05
CLN6-217ENST00000636964 PPP2R1AP30153 589 aa15.37■□□□□ 0.05
CLN6-217ENST00000636964 ARXQ96QS3 562 aa15.37■□□□□ 0.05
CLN6-217ENST00000636964 LRPPRCP42704 1394 aaKnown RBP15.36■□□□□ 0.05
CLN6-217ENST00000636964 EVC2Q86UK5 1308 aa15.35■□□□□ 0.05
CLN6-217ENST00000636964 TNRQ92752 1358 aa15.35■□□□□ 0.05
CLN6-217ENST00000636964 ARHGEF28Q8N1W1 1705 aaKnown RBP15.34■□□□□ 0.05
CLN6-217ENST00000636964 SRPK2P78362 688 aaKnown RBP15.34■□□□□ 0.05
CLN6-217ENST00000636964 YTHDC2Q9H6S0 1430 aaKnown RBP15.34■□□□□ 0.05
CLN6-217ENST00000636964 ALKQ9UM73 1620 aa15.34■□□□□ 0.05
CLN6-217ENST00000636964 WAPLQ7Z5K2 1190 aa15.33■□□□□ 0.04
CLN6-217ENST00000636964 TNNT2P45379 298 aaPredicted RBP15.32■□□□□ 0.04
CLN6-217ENST00000636964 TULP4Q9NRJ4 1543 aa15.31■□□□□ 0.04
CLN6-217ENST00000636964 NSD3Q9BZ95 1437 aa15.31■□□□□ 0.04
CLN6-217ENST00000636964 PAK3O75914 559 aaPredicted RBP15.3■□□□□ 0.04
CLN6-217ENST00000636964 RTN4Q9NQC3 1192 aaKnown RBP15.3■□□□□ 0.04
CLN6-217ENST00000636964 ADAMTS8Q9UP79 889 aa15.3■□□□□ 0.04
CLN6-217ENST00000636964 PTPRMP28827 1452 aa15.3■□□□□ 0.04
CLN6-217ENST00000636964 ERICH6BQ5W0A0 696 aa15.3■□□□□ 0.04
CLN6-217ENST00000636964 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.29■□□□□ 0.04
CLN6-217ENST00000636964 TXNDC2Q86VQ3 553 aa15.28■□□□□ 0.04
CLN6-217ENST00000636964 METP08581 1390 aa15.28■□□□□ 0.04
CLN6-217ENST00000636964 PLEKHH1Q9ULM0 1364 aa15.28■□□□□ 0.04
CLN6-217ENST00000636964 NPC1L1Q9UHC9 1359 aa15.27■□□□□ 0.04
CLN6-217ENST00000636964 WDR43Q15061 677 aaKnown RBP eCLIP15.27■□□□□ 0.03
CLN6-217ENST00000636964 MORC1Q86VD1 984 aa15.27■□□□□ 0.03
CLN6-217ENST00000636964 CDK19Q9BWU1 502 aa15.27■□□□□ 0.03
CLN6-217ENST00000636964 LTKP29376 864 aa15.26■□□□□ 0.03
CLN6-217ENST00000636964 HDGFP51858 240 aaKnown RBP15.26■□□□□ 0.03
CLN6-217ENST00000636964 A0A0U1RQG5 324 aaPredicted RBP15.26■□□□□ 0.03
CLN6-217ENST00000636964 TMEM2Q9UHN6 1383 aa15.25■□□□□ 0.03
CLN6-217ENST00000636964 NBR1Q14596 966 aa15.25■□□□□ 0.03
CLN6-217ENST00000636964 NUDCQ9Y266 331 aa15.25■□□□□ 0.03
CLN6-217ENST00000636964 PUS7Q96PZ0 661 aaKnown RBP15.23■□□□□ 0.03
CLN6-217ENST00000636964 SLC26A8Q96RN1 970 aa15.23■□□□□ 0.03
CLN6-217ENST00000636964 CABP1Q9NZU7 370 aa15.23■□□□□ 0.03
CLN6-217ENST00000636964 CGNL1Q0VF96 1302 aa15.22■□□□□ 0.03
CLN6-217ENST00000636964 CCDC146Q8IYE0 955 aa15.22■□□□□ 0.03
CLN6-217ENST00000636964 CDCA7LQ96GN5 454 aa15.22■□□□□ 0.03
CLN6-217ENST00000636964 SMG6Q86US8 1419 aaKnown RBP15.22■□□□□ 0.03
CLN6-217ENST00000636964 ANKRD36BQ8N2N9 1353 aa15.22■□□□□ 0.03
CLN6-217ENST00000636964 NRXN3Q9Y4C0 1643 aa15.22■□□□□ 0.03
CLN6-217ENST00000636964 UBR1Q8IWV7 1749 aa15.22■□□□□ 0.03
CLN6-217ENST00000636964 A0A1W2PP64 1363 aa15.21■□□□□ 0.03
CLN6-217ENST00000636964 DNAJC5Q9H3Z4 198 aa15.21■□□□□ 0.03
CLN6-217ENST00000636964 BCL11BQ9C0K0 894 aaPredicted RBP15.21■□□□□ 0.03
CLN6-217ENST00000636964 C3P01024 1663 aa15.2■□□□□ 0.02
CLN6-217ENST00000636964 ABCC11Q96J66 1382 aa15.2■□□□□ 0.02
CLN6-217ENST00000636964 GGNBP2Q9H3C7 697 aa15.2■□□□□ 0.02
CLN6-217ENST00000636964 SETD1AO15047 1707 aaKnown RBP15.2■□□□□ 0.02
CLN6-217ENST00000636964 NOP58Q9Y2X3 529 aaKnown RBP15.2■□□□□ 0.02
CLN6-217ENST00000636964 FER1L4A9Z1Z3 1794 aa15.19■□□□□ 0.02
CLN6-217ENST00000636964 BLMP54132 1417 aaPredicted RBP15.19■□□□□ 0.02
CLN6-217ENST00000636964 ATAD2Q6PL18 1390 aa15.19■□□□□ 0.02
CLN6-217ENST00000636964 B4GALNT3Q6L9W6 998 aa15.19■□□□□ 0.02
CLN6-217ENST00000636964 TERF2IPQ9NYB0 399 aa15.19■□□□□ 0.02
CLN6-217ENST00000636964 EID1Q9Y6B2 187 aa15.19■□□□□ 0.02
CLN6-217ENST00000636964 MTHFSP49914 203 aa15.18■□□□□ 0.02
CLN6-217ENST00000636964 IL27Q8NEV9 243 aa15.18■□□□□ 0.02
CLN6-217ENST00000636964 PPP4R2Q9NY27 417 aa15.18■□□□□ 0.02
CLN6-217ENST00000636964 NCKAP5LQ9HCH0 1330 aa15.18■□□□□ 0.02
CLN6-217ENST00000636964 NLRP1Q9C000 1473 aa15.17■□□□□ 0.02
CLN6-217ENST00000636964 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.16■□□□□ 0.02
CLN6-217ENST00000636964 NUTM2FA1L443 756 aa15.16■□□□□ 0.02
CLN6-217ENST00000636964 WASLO00401 505 aaPredicted RBP15.16■□□□□ 0.02
CLN6-217ENST00000636964 HDGFL2Q7Z4V5 671 aaPredicted RBP15.16■□□□□ 0.02
CLN6-217ENST00000636964 ADAMTS13Q76LX8 1427 aa15.16■□□□□ 0.02
CLN6-217ENST00000636964 FGD1P98174 961 aa15.15■□□□□ 0.02
CLN6-217ENST00000636964 FYB1O15117 783 aa15.15■□□□□ 0.02
CLN6-217ENST00000636964 DLC1Q96QB1 1528 aa15.15■□□□□ 0.02
CLN6-217ENST00000636964 THEMISQ8N1K5 641 aaPredicted RBP15.15■□□□□ 0.02
CLN6-217ENST00000636964 CD163L1Q9NR16 1453 aa15.14■□□□□ 0.01
CLN6-217ENST00000636964 APAF1O14727 1248 aa15.14■□□□□ 0.01
CLN6-217ENST00000636964 ROBO2Q9HCK4 1378 aa15.14■□□□□ 0.01
CLN6-217ENST00000636964 NINLQ9Y2I6 1382 aa15.14■□□□□ 0.01
CLN6-217ENST00000636964 PLEKHG1Q9ULL1 1385 aa15.13■□□□□ 0.01
CLN6-217ENST00000636964 FBLN1P23142 703 aa15.12■□□□□ 0.01
CLN6-217ENST00000636964 PDE3BQ13370 1112 aa15.12■□□□□ 0.01
CLN6-217ENST00000636964 NUDT16Q96DE0 195 aaKnown RBP15.12■□□□□ 0.01
CLN6-217ENST00000636964 POLR3AO14802 1390 aaPredicted RBP15.12■□□□□ 0.01
CLN6-217ENST00000636964 INSRP06213 1382 aa15.12■□□□□ 0.01
CLN6-217ENST00000636964 AMOTL2Q9Y2J4 779 aa15.1■□□□□ 0.01
CLN6-217ENST00000636964 NEUROD2Q15784 382 aa15.1■□□□□ 0.01
CLN6-217ENST00000636964 RCAN3Q9UKA8 241 aa15.1■□□□□ 0.01
CLN6-217ENST00000636964 USP32Q8NFA0 1604 aa15.1■□□□□ 0.01
CLN6-217ENST00000636964 CFAP53Q96M91 514 aa15.1■□□□□ 0.01
CLN6-217ENST00000636964 NSD2O96028 1365 aa15.09■□□□□ 0.01
CLN6-217ENST00000636964 PPIP5K1Q6PFW1 1433 aa15.09■□□□□ 0.01
CLN6-217ENST00000636964 PTPRUQ92729 1446 aa15.09■□□□□ 0.01
CLN6-217ENST00000636964 SIRT1Q96EB6 747 aa15.09■□□□□ 0.01
CLN6-217ENST00000636964 RIMS1Q86UR5 1692 aaKnown RBP15.09■□□□□ 0.01
CLN6-217ENST00000636964 FAM135BQ49AJ0 1406 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 119.3 ms