RNA–Protein interactions for RNA: ENST00000636843.1

CTSD-208, Transcript of cathepsin D, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTSD, Length 1,512 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-208ENST00000636843 RGL3Q3MIN7 710 aa18.71■□□□□ 0.59
CTSD-208ENST00000636843 ACIN1Q9UKV3 1341 aaKnown RBP18.71■□□□□ 0.58
CTSD-208ENST00000636843 QTRT2Q9H974 415 aaKnown RBP18.7■□□□□ 0.58
CTSD-208ENST00000636843 SPATA31E1Q6ZUB1 1445 aa18.7■□□□□ 0.58
CTSD-208ENST00000636843 RBM6P78332 1123 aaKnown RBP18.69■□□□□ 0.58
CTSD-208ENST00000636843 NGLY1Q96IV0 654 aa18.69■□□□□ 0.58
CTSD-208ENST00000636843 ADAMTS2O95450 1211 aa18.68■□□□□ 0.58
CTSD-208ENST00000636843 NPHP3Q7Z494 1330 aa18.67■□□□□ 0.58
CTSD-208ENST00000636843 ESCO1Q5FWF5 840 aa18.67■□□□□ 0.58
CTSD-208ENST00000636843 LRPPRCP42704 1394 aaKnown RBP18.67■□□□□ 0.58
CTSD-208ENST00000636843 TECPR2O15040 1411 aa18.66■□□□□ 0.58
CTSD-208ENST00000636843 STK26Q9P289 416 aa18.66■□□□□ 0.58
CTSD-208ENST00000636843 ABCC11Q96J66 1382 aa18.66■□□□□ 0.58
CTSD-208ENST00000636843 CDC42BPGQ6DT37 1551 aa18.66■□□□□ 0.58
CTSD-208ENST00000636843 WAPLQ7Z5K2 1190 aa18.64■□□□□ 0.57
CTSD-208ENST00000636843 TMEM132EQ6IEE7 984 aa18.63■□□□□ 0.57
CTSD-208ENST00000636843 RGS12O14924 1447 aa18.63■□□□□ 0.57
CTSD-208ENST00000636843 PIK3C2GO75747 1445 aa18.63■□□□□ 0.57
CTSD-208ENST00000636843 FNBP4Q8N3X1 1017 aaPredicted RBP18.62■□□□□ 0.57
CTSD-208ENST00000636843 USP21Q9UK80 565 aa18.62■□□□□ 0.57
CTSD-208ENST00000636843 FOXO3O43524 673 aa18.61■□□□□ 0.57
CTSD-208ENST00000636843 SIRT1Q96EB6 747 aa18.61■□□□□ 0.57
CTSD-208ENST00000636843 TRPC5Q9UL62 973 aaPredicted RBP18.61■□□□□ 0.57
CTSD-208ENST00000636843 PXDNQ92626 1479 aa18.6■□□□□ 0.57
CTSD-208ENST00000636843 IFT172Q9UG01 1749 aa18.59■□□□□ 0.57
CTSD-208ENST00000636843 COL22A1Q8NFW1 1626 aaPredicted RBP18.59■□□□□ 0.57
CTSD-208ENST00000636843 YTHDC2Q9H6S0 1430 aaKnown RBP18.59■□□□□ 0.57
CTSD-208ENST00000636843 MYOM2P54296 1465 aa18.59■□□□□ 0.57
CTSD-208ENST00000636843 C14orf93Q9H972 538 aaKnown RBP18.59■□□□□ 0.57
CTSD-208ENST00000636843 PLEKHH1Q9ULM0 1364 aa18.58■□□□□ 0.57
CTSD-208ENST00000636843 NUTM2FA1L443 756 aa18.58■□□□□ 0.56
CTSD-208ENST00000636843 KNDC1Q76NI1 1749 aa18.57■□□□□ 0.56
CTSD-208ENST00000636843 XPCQ01831 940 aaPredicted RBP18.57■□□□□ 0.56
CTSD-208ENST00000636843 DHX57Q6P158 1386 aaKnown RBP18.55■□□□□ 0.56
CTSD-208ENST00000636843 ATRNO75882 1429 aa18.55■□□□□ 0.56
CTSD-208ENST00000636843 NRXN1Q9ULB1 1477 aa18.54■□□□□ 0.56
CTSD-208ENST00000636843 CFAP70Q5T0N1 1121 aa18.54■□□□□ 0.56
CTSD-208ENST00000636843 ATAD2Q6PL18 1390 aa18.53■□□□□ 0.56
CTSD-208ENST00000636843 SPATA31A3Q5VYP0 1347 aa18.52■□□□□ 0.56
CTSD-208ENST00000636843 BCL9LQ86UU0 1499 aa18.52■□□□□ 0.55
CTSD-208ENST00000636843 FMN2Q9NZ56 1722 aa18.51■□□□□ 0.55
CTSD-208ENST00000636843 KRT28Q7Z3Y7 464 aa18.51■□□□□ 0.55
CTSD-208ENST00000636843 PHF8Q9UPP1 1060 aa18.5■□□□□ 0.55
CTSD-208ENST00000636843 KIF1AQ12756 1690 aa18.5■□□□□ 0.55
CTSD-208ENST00000636843 RAB3GAP2Q9H2M9 1393 aa18.5■□□□□ 0.55
CTSD-208ENST00000636843 PSME1Q06323 249 aa18.49■□□□□ 0.55
CTSD-208ENST00000636843 PRAM1Q96QH2 718 aa18.49■□□□□ 0.55
CTSD-208ENST00000636843 GJD4Q96KN9 370 aaPredicted RBP18.48■□□□□ 0.55
CTSD-208ENST00000636843 UNC5CLQ8IV45 518 aa18.47■□□□□ 0.55
CTSD-208ENST00000636843 POGKQ9P215 609 aa18.47■□□□□ 0.55
CTSD-208ENST00000636843 ZEB1P37275 1124 aaPredicted RBP18.46■□□□□ 0.55
CTSD-208ENST00000636843 SAFB2Q14151 953 aaKnown RBP eCLIP18.46■□□□□ 0.55
CTSD-208ENST00000636843 MARF1Q9Y4F3 1742 aaKnown RBP18.46■□□□□ 0.55
CTSD-208ENST00000636843 DLC1Q96QB1 1528 aa18.45■□□□□ 0.54
CTSD-208ENST00000636843 TNS3Q68CZ2 1445 aa18.45■□□□□ 0.54
CTSD-208ENST00000636843 STAC3Q96MF2 364 aa18.44■□□□□ 0.54
CTSD-208ENST00000636843 SBNO1A3KN83 1393 aa18.44■□□□□ 0.54
CTSD-208ENST00000636843 SLIT2O94813 1529 aa18.44■□□□□ 0.54
CTSD-208ENST00000636843 HAP1P54257 671 aaPredicted RBP18.44■□□□□ 0.54
CTSD-208ENST00000636843 CCDC125Q86Z20 511 aa18.44■□□□□ 0.54
CTSD-208ENST00000636843 ANKARQ7Z5J8 1434 aa18.43■□□□□ 0.54
CTSD-208ENST00000636843 ARHGEF10O15013 1369 aa18.42■□□□□ 0.54
CTSD-208ENST00000636843 TRAK1Q9UPV9 953 aa18.41■□□□□ 0.54
CTSD-208ENST00000636843 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.41■□□□□ 0.54
CTSD-208ENST00000636843 LMOD2Q6P5Q4 547 aa18.4■□□□□ 0.54
CTSD-208ENST00000636843 USP32Q8NFA0 1604 aa18.4■□□□□ 0.54
CTSD-208ENST00000636843 RALGAPBQ86X10 1494 aa18.4■□□□□ 0.54
CTSD-208ENST00000636843 ADGRB1O14514 1584 aa18.4■□□□□ 0.54
CTSD-208ENST00000636843 CABLES1Q8TDN4 633 aa18.39■□□□□ 0.54
CTSD-208ENST00000636843 DCAF11Q8TEB1 546 aa18.39■□□□□ 0.54
CTSD-208ENST00000636843 KDM2AQ9Y2K7 1162 aa18.39■□□□□ 0.54
CTSD-208ENST00000636843 RGPD8O14715 1765 aaPredicted RBP18.39■□□□□ 0.53
CTSD-208ENST00000636843 PMFBP1Q8TBY8 1022 aa18.39■□□□□ 0.53
CTSD-208ENST00000636843 ADGRB2O60241 1585 aa18.38■□□□□ 0.53
CTSD-208ENST00000636843 EIF3AQ14152 1382 aaKnown RBP18.38■□□□□ 0.53
CTSD-208ENST00000636843 VPS72Q15906 364 aa18.38■□□□□ 0.53
CTSD-208ENST00000636843 HIRIP3Q9BW71 556 aaPredicted RBP18.37■□□□□ 0.53
CTSD-208ENST00000636843 MINK1Q8N4C8 1332 aaPredicted RBP18.36■□□□□ 0.53
CTSD-208ENST00000636843 GPRASP1Q5JY77 1395 aa18.36■□□□□ 0.53
CTSD-208ENST00000636843 GLI3P10071 1580 aa18.36■□□□□ 0.53
CTSD-208ENST00000636843 ZRANB1Q9UGI0 708 aa18.35■□□□□ 0.53
CTSD-208ENST00000636843 WASLO00401 505 aaPredicted RBP18.34■□□□□ 0.53
CTSD-208ENST00000636843 PLEKHG5O94827 1062 aa18.34■□□□□ 0.53
CTSD-208ENST00000636843 FAM83GA6ND36 823 aa18.33■□□□□ 0.53
CTSD-208ENST00000636843 EP400Q96L91 3159 aa18.33■□□□□ 0.52
CTSD-208ENST00000636843 PRR36Q9H6K5 1346 aa18.33■□□□□ 0.52
CTSD-208ENST00000636843 ONECUT3O60422 494 aaPredicted RBP18.33■□□□□ 0.52
CTSD-208ENST00000636843 SEPT12Q8IYM1 358 aa18.33■□□□□ 0.52
CTSD-208ENST00000636843 CCDC9Q9Y3X0 531 aaKnown RBP18.33■□□□□ 0.52
CTSD-208ENST00000636843 TULP4Q9NRJ4 1543 aa18.32■□□□□ 0.52
CTSD-208ENST00000636843 BLMP54132 1417 aaPredicted RBP18.31■□□□□ 0.52
CTSD-208ENST00000636843 NWD2Q9ULI1 1742 aa18.3■□□□□ 0.52
CTSD-208ENST00000636843 NGDNQ8NEJ9 315 aaKnown RBP18.3■□□□□ 0.52
CTSD-208ENST00000636843 ABCA3Q99758 1704 aa18.29■□□□□ 0.52
CTSD-208ENST00000636843 PLCH1Q4KWH8 1693 aa18.28■□□□□ 0.52
CTSD-208ENST00000636843 TRPM3Q9HCF6 1732 aaPredicted RBP18.28■□□□□ 0.52
CTSD-208ENST00000636843 SF3B2Q13435 895 aaKnown RBP18.28■□□□□ 0.52
CTSD-208ENST00000636843 KRT27Q7Z3Y8 459 aa18.27■□□□□ 0.51
CTSD-208ENST00000636843 BTG4Q9NY30 223 aa18.27■□□□□ 0.51
CTSD-208ENST00000636843 NUDT16Q96DE0 195 aaKnown RBP18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms