RNA–Protein interactions for RNA: ENST00000635214.1

PATJ-216, Transcript of PATJ, crumbs cell polarity complex component, humanhuman

TSL 1 (best)

Gene PATJ, Length 4,863 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PATJ-216ENST00000635214 VGFO15240 615 aaPredicted RBP10.83□□□□□ -0.68
PATJ-216ENST00000635214 ITPRIPQ8IWB1 547 aa10.83□□□□□ -0.68
PATJ-216ENST00000635214 RPGRIP1LQ68CZ1 1315 aa10.83□□□□□ -0.68
PATJ-216ENST00000635214 GOLGA2Q08379 1002 aa10.83□□□□□ -0.68
PATJ-216ENST00000635214 ATP6V1DQ9Y5K8 247 aa10.83□□□□□ -0.68
PATJ-216ENST00000635214 MAST1Q9Y2H9 1570 aa10.83□□□□□ -0.68
PATJ-216ENST00000635214 WASHC2AQ641Q2 1341 aa10.83□□□□□ -0.68
PATJ-216ENST00000635214 KIF3AQ9Y496 699 aa10.82□□□□□ -0.68
PATJ-216ENST00000635214 KIF16BQ96L93 1317 aa10.82□□□□□ -0.68
PATJ-216ENST00000635214 TOM1O60784 492 aa10.81□□□□□ -0.68
PATJ-216ENST00000635214 SRPK2P78362 688 aaKnown RBP10.81□□□□□ -0.68
PATJ-216ENST00000635214 HMMRO75330 724 aa10.81□□□□□ -0.68
PATJ-216ENST00000635214 NOM1Q5C9Z4 860 aaKnown RBP10.81□□□□□ -0.68
PATJ-216ENST00000635214 ZBED9Q6R2W3 1325 aa10.81□□□□□ -0.68
PATJ-216ENST00000635214 YEATS2Q9ULM3 1422 aa10.81□□□□□ -0.68
PATJ-216ENST00000635214 TPM2P07951 284 aa10.8□□□□□ -0.68
PATJ-216ENST00000635214 CHMP5Q9NZZ3 219 aa10.8□□□□□ -0.68
PATJ-216ENST00000635214 EIF2AK4Q9P2K8 1649 aaKnown RBP10.79□□□□□ -0.68
PATJ-216ENST00000635214 CCDC7Q96M83 1385 aa10.79□□□□□ -0.68
PATJ-216ENST00000635214 GOLGA6L19H0YKK7 550 aa10.79□□□□□ -0.68
PATJ-216ENST00000635214 HDAC5Q9UQL6 1122 aa10.79□□□□□ -0.68
PATJ-216ENST00000635214 LMOD3Q0VAK6 560 aa10.79□□□□□ -0.68
PATJ-216ENST00000635214 PRKRIP1Q9H875 184 aaPredicted RBP10.79□□□□□ -0.68
PATJ-216ENST00000635214 A0A0G2JS52 829 aa10.78□□□□□ -0.68
PATJ-216ENST00000635214 CCDC70Q6NSX1 233 aa10.78□□□□□ -0.68
PATJ-216ENST00000635214 CCDC66A2RUB6 948 aa10.78□□□□□ -0.68
PATJ-216ENST00000635214 TXNDC2Q86VQ3 553 aa10.78□□□□□ -0.68
PATJ-216ENST00000635214 CHMP4CQ96CF2 233 aa10.78□□□□□ -0.68
PATJ-216ENST00000635214 RPRD2Q5VT52 1461 aaKnown RBP10.78□□□□□ -0.68
PATJ-216ENST00000635214 ZNF644Q9H582 1327 aaPredicted RBP10.78□□□□□ -0.68
PATJ-216ENST00000635214 CENPJQ9HC77 1338 aaPredicted RBP10.78□□□□□ -0.68
PATJ-216ENST00000635214 ABCC5O15440 1437 aa10.78□□□□□ -0.68
PATJ-216ENST00000635214 MRE11P49959 708 aa10.78□□□□□ -0.68
PATJ-216ENST00000635214 PLXNC1O60486 1568 aa10.77□□□□□ -0.69
PATJ-216ENST00000635214 ADGRL2O95490 1459 aa10.77□□□□□ -0.69
PATJ-216ENST00000635214 DIAPH3Q9NSV4 1193 aa10.77□□□□□ -0.69
PATJ-216ENST00000635214 APBB1O00213 710 aa10.77□□□□□ -0.69
PATJ-216ENST00000635214 EVC2Q86UK5 1308 aa10.77□□□□□ -0.69
PATJ-216ENST00000635214 BECN2A8MW95 431 aa10.76□□□□□ -0.69
PATJ-216ENST00000635214 DIP2CQ9Y2E4 1556 aa10.76□□□□□ -0.69
PATJ-216ENST00000635214 GPATCH3Q96I76 525 aa10.76□□□□□ -0.69
PATJ-216ENST00000635214 ARGLU1Q9NWB6 273 aaPredicted RBP10.76□□□□□ -0.69
PATJ-216ENST00000635214 AAMPQ13685 434 aa10.76□□□□□ -0.69
PATJ-216ENST00000635214 CGNL1Q0VF96 1302 aa10.76□□□□□ -0.69
PATJ-216ENST00000635214 ARHGEF12Q9NZN5 1544 aa10.76□□□□□ -0.69
PATJ-216ENST00000635214 SMC4Q9NTJ3 1288 aa10.76□□□□□ -0.69
PATJ-216ENST00000635214 A2ML1A8K2U0 1454 aa10.76□□□□□ -0.69
PATJ-216ENST00000635214 CDC42BPAQ5VT25 1732 aa10.76□□□□□ -0.69
PATJ-216ENST00000635214 FOXD4L1Q9NU39 408 aa10.75□□□□□ -0.69
PATJ-216ENST00000635214 ZC3H13Q5T200 1668 aaKnown RBP10.75□□□□□ -0.69
PATJ-216ENST00000635214 DNMT1P26358 1616 aaKnown RBP10.75□□□□□ -0.69
PATJ-216ENST00000635214 KDM4FA0A1W2PPD8 638 aa10.75□□□□□ -0.69
PATJ-216ENST00000635214 RTF1Q92541 710 aaKnown RBP10.75□□□□□ -0.69
PATJ-216ENST00000635214 PTPRTO14522 1441 aa10.75□□□□□ -0.69
PATJ-216ENST00000635214 BCORL1Q5H9F3 1711 aa10.75□□□□□ -0.69
PATJ-216ENST00000635214 PPRC1Q5VV67 1664 aaKnown RBP10.75□□□□□ -0.69
PATJ-216ENST00000635214 RICTORQ6R327 1708 aa10.75□□□□□ -0.69
PATJ-216ENST00000635214 NAIPQ13075 1403 aa10.75□□□□□ -0.69
PATJ-216ENST00000635214 PZPP20742 1482 aa10.75□□□□□ -0.69
PATJ-216ENST00000635214 SLC4A3P48751 1232 aa10.75□□□□□ -0.69
PATJ-216ENST00000635214 BRD4O60885 1362 aaPredicted RBP10.75□□□□□ -0.69
PATJ-216ENST00000635214 ST20-MTHFSA0A0A6YYL1 179 aa10.74□□□□□ -0.69
PATJ-216ENST00000635214 TPM1P09493 284 aa10.74□□□□□ -0.69
PATJ-216ENST00000635214 HSP90B1P14625 803 aaKnown RBP10.74□□□□□ -0.69
PATJ-216ENST00000635214 RRP1P56182 461 aaKnown RBP10.74□□□□□ -0.69
PATJ-216ENST00000635214 TSR1Q2NL82 804 aaKnown RBP10.74□□□□□ -0.69
PATJ-216ENST00000635214 ACBD3Q9H3P7 528 aa10.74□□□□□ -0.69
PATJ-216ENST00000635214 CWC15Q9P013 229 aaKnown RBP10.74□□□□□ -0.69
PATJ-216ENST00000635214 ARHGAP31Q2M1Z3 1444 aa10.74□□□□□ -0.69
PATJ-216ENST00000635214 U2AF1L5P0DN76 240 aaPredicted RBP10.74□□□□□ -0.69
PATJ-216ENST00000635214 U2AF1Q01081 240 aaKnown RBP eCLIP10.74□□□□□ -0.69
PATJ-216ENST00000635214 MBD5Q9P267 1494 aa10.73□□□□□ -0.69
PATJ-216ENST00000635214 TRIM6-TRIM34B2RNG4 842 aa10.73□□□□□ -0.69
PATJ-216ENST00000635214 ATF3P18847 181 aa10.73□□□□□ -0.69
PATJ-216ENST00000635214 SF3A1Q15459 793 aaKnown RBP10.73□□□□□ -0.69
PATJ-216ENST00000635214 RIMS1Q86UR5 1692 aaKnown RBP10.73□□□□□ -0.69
PATJ-216ENST00000635214 NCOA1Q15788 1441 aa10.73□□□□□ -0.69
PATJ-216ENST00000635214 NFKBIBQ15653 356 aa10.73□□□□□ -0.69
PATJ-216ENST00000635214 CCAR2Q8N163 923 aaKnown RBP10.73□□□□□ -0.69
PATJ-216ENST00000635214 INO80Q9ULG1 1556 aaPredicted RBP10.73□□□□□ -0.69
PATJ-216ENST00000635214 FER1L4A9Z1Z3 1794 aa10.73□□□□□ -0.69
PATJ-216ENST00000635214 PRKCSHP14314 528 aaPredicted RBP10.72□□□□□ -0.69
PATJ-216ENST00000635214 APPP05067 770 aa10.72□□□□□ -0.69
PATJ-216ENST00000635214 COL17A1Q9UMD9 1497 aaPredicted RBP10.72□□□□□ -0.69
PATJ-216ENST00000635214 NUCB2P80303 420 aa10.72□□□□□ -0.69
PATJ-216ENST00000635214 HMGN5P82970 282 aaKnown RBP10.72□□□□□ -0.69
PATJ-216ENST00000635214 PODXL2Q9NZ53 605 aa10.72□□□□□ -0.69
PATJ-216ENST00000635214 CDC42BPBQ9Y5S2 1711 aa10.72□□□□□ -0.69
PATJ-216ENST00000635214 ZNF592Q92610 1267 aa10.72□□□□□ -0.69
PATJ-216ENST00000635214 CCDC39Q9UFE4 941 aa10.72□□□□□ -0.69
PATJ-216ENST00000635214 CEP89Q96ST8 783 aa10.71□□□□□ -0.69
PATJ-216ENST00000635214 PLA2R1Q13018 1463 aa10.71□□□□□ -0.69
PATJ-216ENST00000635214 PTPRKQ15262 1439 aa10.71□□□□□ -0.69
PATJ-216ENST00000635214 CLSTN1O94985 981 aa10.71□□□□□ -0.69
PATJ-216ENST00000635214 MROH2AA6NES4 1674 aa10.71□□□□□ -0.7
PATJ-216ENST00000635214 PROSER2Q86WR7 435 aaPredicted RBP10.7□□□□□ -0.7
PATJ-216ENST00000635214 ANO8Q9HCE9 1232 aaPredicted RBP10.7□□□□□ -0.7
PATJ-216ENST00000635214 STK31Q9BXU1 1019 aa10.7□□□□□ -0.7
PATJ-216ENST00000635214 E9PSI1 815 aa10.7□□□□□ -0.7
PATJ-216ENST00000635214 EXOC6Q8TAG9 804 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms