RNA–Protein interactions for RNA: ENST00000629293.1

LINC00550-201, long intergenic non-protein coding RNA 550, humanhuman

TSL 1 (best) BASIC

Gene LINC00550, Length 3,434 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00550-201ENST00000629293 SLAIN2Q9P270 581 aa7.29□□□□□ -1.24
LINC00550-201ENST00000629293 STRCP1A6NGW2 1772 aa7.29□□□□□ -1.24
LINC00550-201ENST00000629293 NUTM2BA6NNL0 878 aaPredicted RBP7.29□□□□□ -1.24
LINC00550-201ENST00000629293 NUTM2EB1AL46 878 aaPredicted RBP7.29□□□□□ -1.24
LINC00550-201ENST00000629293 NUTM2AQ8IVF1 878 aaPredicted RBP7.29□□□□□ -1.24
LINC00550-201ENST00000629293 DEPDC5O75140 1603 aa7.29□□□□□ -1.24
LINC00550-201ENST00000629293 MSH6P52701 1360 aa7.29□□□□□ -1.24
LINC00550-201ENST00000629293 DAPK1P53355 1430 aa7.28□□□□□ -1.24
LINC00550-201ENST00000629293 RNF17Q9BXT8 1623 aaKnown RBP7.28□□□□□ -1.24
LINC00550-201ENST00000629293 FGD6Q6ZV73 1430 aa7.27□□□□□ -1.24
LINC00550-201ENST00000629293 PCDHB8Q9UN66 801 aa7.27□□□□□ -1.25
LINC00550-201ENST00000629293 PCDHB13Q9Y5F0 798 aa7.27□□□□□ -1.25
LINC00550-201ENST00000629293 MROH1Q8NDA8 1641 aa7.27□□□□□ -1.25
LINC00550-201ENST00000629293 ERBINQ96RT1 1412 aa7.27□□□□□ -1.25
LINC00550-201ENST00000629293 UBR1Q8IWV7 1749 aa7.27□□□□□ -1.25
LINC00550-201ENST00000629293 ATF3P18847 181 aa7.27□□□□□ -1.25
LINC00550-201ENST00000629293 SLC52A1Q9NWF4 448 aa7.27□□□□□ -1.25
LINC00550-201ENST00000629293 EFCAB6Q5THR3 1501 aa7.26□□□□□ -1.25
LINC00550-201ENST00000629293 ARIH1Q9Y4X5 557 aaPredicted RBP7.26□□□□□ -1.25
LINC00550-201ENST00000629293 CCDC61Q9Y6R9 512 aa7.26□□□□□ -1.25
LINC00550-201ENST00000629293 PIK3C2BO00750 1634 aa7.26□□□□□ -1.25
LINC00550-201ENST00000629293 HDGFP51858 240 aaKnown RBP7.26□□□□□ -1.25
LINC00550-201ENST00000629293 ZNF326Q5BKZ1 582 aaKnown RBP7.26□□□□□ -1.25
LINC00550-201ENST00000629293 FAM135BQ49AJ0 1406 aa7.26□□□□□ -1.25
LINC00550-201ENST00000629293 ARHGAP23Q9P227 1491 aa7.26□□□□□ -1.25
LINC00550-201ENST00000629293 PTPN23Q9H3S7 1636 aa7.26□□□□□ -1.25
LINC00550-201ENST00000629293 ARHGAP31Q2M1Z3 1444 aa7.25□□□□□ -1.25
LINC00550-201ENST00000629293 ZC3H13Q5T200 1668 aaKnown RBP7.25□□□□□ -1.25
LINC00550-201ENST00000629293 MAST1Q9Y2H9 1570 aa7.25□□□□□ -1.25
LINC00550-201ENST00000629293 PDAP1Q13442 181 aaKnown RBP7.25□□□□□ -1.25
LINC00550-201ENST00000629293 WDR70Q9NW82 654 aa7.25□□□□□ -1.25
LINC00550-201ENST00000629293 CLEC11AQ9Y240 323 aa7.25□□□□□ -1.25
LINC00550-201ENST00000629293 SLIT1O75093 1534 aa7.25□□□□□ -1.25
LINC00550-201ENST00000629293 E2F4Q16254 413 aa7.25□□□□□ -1.25
LINC00550-201ENST00000629293 ANKRD50Q9ULJ7 1429 aa7.24□□□□□ -1.25
LINC00550-201ENST00000629293 PITPNM1O00562 1244 aa7.24□□□□□ -1.25
LINC00550-201ENST00000629293 NEUROD2Q15784 382 aa7.24□□□□□ -1.25
LINC00550-201ENST00000629293 EIF2AK4Q9P2K8 1649 aaKnown RBP7.24□□□□□ -1.25
LINC00550-201ENST00000629293 SYNMO15061 1565 aa7.24□□□□□ -1.25
LINC00550-201ENST00000629293 PRDM15P57071 1507 aaPredicted RBP7.24□□□□□ -1.25
LINC00550-201ENST00000629293 RIMS2Q9UQ26 1411 aa7.24□□□□□ -1.25
LINC00550-201ENST00000629293 MFSD10Q14728 455 aa7.24□□□□□ -1.25
LINC00550-201ENST00000629293 ZNF467Q7Z7K2 595 aaPredicted RBP7.24□□□□□ -1.25
LINC00550-201ENST00000629293 JCADQ9P266 1359 aa7.23□□□□□ -1.25
LINC00550-201ENST00000629293 DDX17Q92841 729 aaKnown RBP7.23□□□□□ -1.25
LINC00550-201ENST00000629293 AMOTL2Q9Y2J4 779 aa7.23□□□□□ -1.25
LINC00550-201ENST00000629293 ABCF1Q8NE71 845 aaKnown RBP eCLIP7.22□□□□□ -1.25
LINC00550-201ENST00000629293 C19orf44Q9H6X5 657 aa7.22□□□□□ -1.25
LINC00550-201ENST00000629293 ROBO1Q9Y6N7 1651 aa7.22□□□□□ -1.25
LINC00550-201ENST00000629293 MS4A4AQ96JQ5 239 aa7.22□□□□□ -1.25
LINC00550-201ENST00000629293 NUP155O75694 1391 aa7.22□□□□□ -1.25
LINC00550-201ENST00000629293 MAP3K1Q13233 1512 aa7.21□□□□□ -1.25
LINC00550-201ENST00000629293 BARGINQ6ZT62 677 aa7.21□□□□□ -1.25
LINC00550-201ENST00000629293 NOS1P29475 1434 aa7.21□□□□□ -1.26
LINC00550-201ENST00000629293 ADAMTS2O95450 1211 aa7.21□□□□□ -1.26
LINC00550-201ENST00000629293 CAMK2BQ13554 666 aa7.21□□□□□ -1.26
LINC00550-201ENST00000629293 ZNF579Q8NAF0 562 aaKnown RBP7.21□□□□□ -1.26
LINC00550-201ENST00000629293 C8orf37Q96NL8 207 aa7.21□□□□□ -1.26
LINC00550-201ENST00000629293 TBX22Q9Y458 520 aa7.21□□□□□ -1.26
LINC00550-201ENST00000629293 PSEN1P49768 467 aa7.21□□□□□ -1.26
LINC00550-201ENST00000629293 PLEKHG1Q9ULL1 1385 aa7.2□□□□□ -1.26
LINC00550-201ENST00000629293 RXRBP28702 533 aa7.2□□□□□ -1.26
LINC00550-201ENST00000629293 ZNF772Q68DY9 489 aaPredicted RBP7.2□□□□□ -1.26
LINC00550-201ENST00000629293 CRISPLD2Q9H0B8 497 aa7.2□□□□□ -1.26
LINC00550-201ENST00000629293 XIRP1Q702N8 1843 aaKnown RBP7.2□□□□□ -1.26
LINC00550-201ENST00000629293 BRINP3Q76B58 766 aa7.2□□□□□ -1.26
LINC00550-201ENST00000629293 ADGRB3O60242 1522 aa7.2□□□□□ -1.26
LINC00550-201ENST00000629293 EFCAB3Q8N7B9 438 aa7.19□□□□□ -1.26
LINC00550-201ENST00000629293 NKTRP30414 1462 aaKnown RBP7.19□□□□□ -1.26
LINC00550-201ENST00000629293 PHF8Q9UPP1 1060 aa7.19□□□□□ -1.26
LINC00550-201ENST00000629293 AFF2P51816 1311 aa7.18□□□□□ -1.26
LINC00550-201ENST00000629293 IFNL1Q8IU54 200 aa7.18□□□□□ -1.26
LINC00550-201ENST00000629293 UPF1Q92900 1129 aaKnown RBP eCLIP7.18□□□□□ -1.26
LINC00550-201ENST00000629293 NGLY1Q96IV0 654 aa7.18□□□□□ -1.26
LINC00550-201ENST00000629293 CROCC2H7BZ55 1655 aa7.18□□□□□ -1.26
LINC00550-201ENST00000629293 TET3O43151 1660 aa7.18□□□□□ -1.26
LINC00550-201ENST00000629293 SETD1AO15047 1707 aaKnown RBP7.18□□□□□ -1.26
LINC00550-201ENST00000629293 ZFYVE9O95405 1425 aa7.18□□□□□ -1.26
LINC00550-201ENST00000629293 GPBP1L1Q9HC44 474 aaPredicted RBP7.18□□□□□ -1.26
LINC00550-201ENST00000629293 PHLPP1O60346 1717 aa7.18□□□□□ -1.26
LINC00550-201ENST00000629293 SPATA31A6Q5VVP1 1343 aa7.18□□□□□ -1.26
LINC00550-201ENST00000629293 LMTK2Q8IWU2 1503 aa7.17□□□□□ -1.26
LINC00550-201ENST00000629293 NUTM2FA1L443 756 aa7.17□□□□□ -1.26
LINC00550-201ENST00000629293 TSPYL2Q9H2G4 693 aaPredicted RBP7.17□□□□□ -1.26
LINC00550-201ENST00000629293 QTRT2Q9H974 415 aaKnown RBP7.17□□□□□ -1.26
LINC00550-201ENST00000629293 LRP6O75581 1613 aa7.16□□□□□ -1.26
LINC00550-201ENST00000629293 ZEB1P37275 1124 aaPredicted RBP7.16□□□□□ -1.26
LINC00550-201ENST00000629293 CHADLQ6NUI6 762 aa7.16□□□□□ -1.26
LINC00550-201ENST00000629293 ADAMTS13Q76LX8 1427 aa7.16□□□□□ -1.26
LINC00550-201ENST00000629293 LRRC59Q96AG4 307 aaKnown RBP7.16□□□□□ -1.26
LINC00550-201ENST00000629293 RBM42Q9BTD8 480 aaKnown RBP7.16□□□□□ -1.26
LINC00550-201ENST00000629293 MYO5BQ9ULV0 1848 aa7.16□□□□□ -1.26
LINC00550-201ENST00000629293 XPCQ01831 940 aaPredicted RBP7.15□□□□□ -1.26
LINC00550-201ENST00000629293 RPRD2Q5VT52 1461 aaKnown RBP7.15□□□□□ -1.26
LINC00550-201ENST00000629293 ADGRL2O95490 1459 aa7.15□□□□□ -1.26
LINC00550-201ENST00000629293 GPR37O15354 613 aa7.15□□□□□ -1.27
LINC00550-201ENST00000629293 C1orf115Q9H7X2 142 aa7.15□□□□□ -1.27
LINC00550-201ENST00000629293 FARP1Q9Y4F1 1045 aaPredicted RBP7.15□□□□□ -1.27
LINC00550-201ENST00000629293 METP08581 1390 aa7.15□□□□□ -1.27
LINC00550-201ENST00000629293 PTPRUQ92729 1446 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms