RNA–Protein interactions for RNA: ENST00000627238.1

TRIM29-221, Transcript of tripartite motif containing 29, humanhuman

TSL 5 BASIC

Gene TRIM29, Length 510 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM29-221ENST00000627238 RGS12O14924 1447 aa24.76■■□□□ 1.55
TRIM29-221ENST00000627238 KNDC1Q76NI1 1749 aa24.75■■□□□ 1.55
TRIM29-221ENST00000627238 QTRT2Q9H974 415 aaKnown RBP24.74■■□□□ 1.55
TRIM29-221ENST00000627238 ADGRF5Q8IZF2 1346 aa24.73■■□□□ 1.55
TRIM29-221ENST00000627238 MYOM2P54296 1465 aa24.71■■□□□ 1.55
TRIM29-221ENST00000627238 PXDNQ92626 1479 aa24.71■■□□□ 1.55
TRIM29-221ENST00000627238 LRPPRCP42704 1394 aaKnown RBP24.71■■□□□ 1.55
TRIM29-221ENST00000627238 ABCC11Q96J66 1382 aa24.71■■□□□ 1.55
TRIM29-221ENST00000627238 PIK3C2GO75747 1445 aa24.7■■□□□ 1.55
TRIM29-221ENST00000627238 NPHP3Q7Z494 1330 aa24.7■■□□□ 1.54
TRIM29-221ENST00000627238 FOXD1Q16676 465 aa24.7■■□□□ 1.54
TRIM29-221ENST00000627238 ACIN1Q9UKV3 1341 aaKnown RBP24.69■■□□□ 1.54
TRIM29-221ENST00000627238 FNBP4Q8N3X1 1017 aaPredicted RBP24.69■■□□□ 1.54
TRIM29-221ENST00000627238 NGLY1Q96IV0 654 aa24.69■■□□□ 1.54
TRIM29-221ENST00000627238 MPHOSPH9Q99550 1183 aa24.69■■□□□ 1.54
TRIM29-221ENST00000627238 ADAMTS2O95450 1211 aa24.67■■□□□ 1.54
TRIM29-221ENST00000627238 MARF1Q9Y4F3 1742 aaKnown RBP24.66■■□□□ 1.54
TRIM29-221ENST00000627238 FMN2Q9NZ56 1722 aa24.64■■□□□ 1.54
TRIM29-221ENST00000627238 ATRNO75882 1429 aa24.64■■□□□ 1.54
TRIM29-221ENST00000627238 ESCO1Q5FWF5 840 aa24.64■■□□□ 1.54
TRIM29-221ENST00000627238 USP21Q9UK80 565 aa24.64■■□□□ 1.54
TRIM29-221ENST00000627238 TRPC5Q9UL62 973 aaPredicted RBP24.64■■□□□ 1.54
TRIM29-221ENST00000627238 NRXN1Q9ULB1 1477 aa24.64■■□□□ 1.53
TRIM29-221ENST00000627238 RGL3Q3MIN7 710 aa24.63■■□□□ 1.53
TRIM29-221ENST00000627238 SIRT1Q96EB6 747 aa24.63■■□□□ 1.53
TRIM29-221ENST00000627238 KIF1AQ12756 1690 aa24.62■■□□□ 1.53
TRIM29-221ENST00000627238 YTHDC2Q9H6S0 1430 aaKnown RBP24.61■■□□□ 1.53
TRIM29-221ENST00000627238 WAPLQ7Z5K2 1190 aa24.61■■□□□ 1.53
TRIM29-221ENST00000627238 EP400Q96L91 3159 aa24.59■■□□□ 1.53
TRIM29-221ENST00000627238 PLEKHH1Q9ULM0 1364 aa24.59■■□□□ 1.53
TRIM29-221ENST00000627238 FOXO3O43524 673 aa24.59■■□□□ 1.53
TRIM29-221ENST00000627238 BCL9LQ86UU0 1499 aa24.58■■□□□ 1.53
TRIM29-221ENST00000627238 ATAD2Q6PL18 1390 aa24.58■■□□□ 1.53
TRIM29-221ENST00000627238 STK26Q9P289 416 aa24.58■■□□□ 1.53
TRIM29-221ENST00000627238 TNKS1BP1Q9C0C2 1729 aaKnown RBP24.58■■□□□ 1.52
TRIM29-221ENST00000627238 TMEM132EQ6IEE7 984 aa24.57■■□□□ 1.52
TRIM29-221ENST00000627238 C14orf93Q9H972 538 aaKnown RBP24.57■■□□□ 1.52
TRIM29-221ENST00000627238 SPATA31A3Q5VYP0 1347 aa24.53■■□□□ 1.52
TRIM29-221ENST00000627238 SRCAPQ6ZRS2 3230 aa24.51■■□□□ 1.51
TRIM29-221ENST00000627238 XPCQ01831 940 aaPredicted RBP24.51■■□□□ 1.51
TRIM29-221ENST00000627238 SLIT2O94813 1529 aa24.51■■□□□ 1.51
TRIM29-221ENST00000627238 DLC1Q96QB1 1528 aa24.51■■□□□ 1.51
TRIM29-221ENST00000627238 DHX57Q6P158 1386 aaKnown RBP24.5■■□□□ 1.51
TRIM29-221ENST00000627238 NUTM2FA1L443 756 aa24.49■■□□□ 1.51
TRIM29-221ENST00000627238 USP32Q8NFA0 1604 aa24.49■■□□□ 1.51
TRIM29-221ENST00000627238 RGPD8O14715 1765 aaPredicted RBP24.48■■□□□ 1.51
TRIM29-221ENST00000627238 GJD4Q96KN9 370 aaPredicted RBP24.47■■□□□ 1.51
TRIM29-221ENST00000627238 ADGRB2O60241 1585 aa24.46■■□□□ 1.51
TRIM29-221ENST00000627238 TNS3Q68CZ2 1445 aa24.46■■□□□ 1.51
TRIM29-221ENST00000627238 CFAP70Q5T0N1 1121 aa24.46■■□□□ 1.51
TRIM29-221ENST00000627238 KRT28Q7Z3Y7 464 aa24.45■■□□□ 1.5
TRIM29-221ENST00000627238 ADGRB1O14514 1584 aa24.45■■□□□ 1.5
TRIM29-221ENST00000627238 GLI3P10071 1580 aa24.45■■□□□ 1.5
TRIM29-221ENST00000627238 ANKARQ7Z5J8 1434 aa24.44■■□□□ 1.5
TRIM29-221ENST00000627238 SBNO1A3KN83 1393 aa24.44■■□□□ 1.5
TRIM29-221ENST00000627238 CCDC125Q86Z20 511 aa24.44■■□□□ 1.5
TRIM29-221ENST00000627238 PHF8Q9UPP1 1060 aa24.44■■□□□ 1.5
TRIM29-221ENST00000627238 UNC5CLQ8IV45 518 aa24.43■■□□□ 1.5
TRIM29-221ENST00000627238 RALGAPBQ86X10 1494 aa24.42■■□□□ 1.5
TRIM29-221ENST00000627238 ABCA3Q99758 1704 aa24.41■■□□□ 1.5
TRIM29-221ENST00000627238 NWD2Q9ULI1 1742 aa24.41■■□□□ 1.5
TRIM29-221ENST00000627238 PSME1Q06323 249 aa24.41■■□□□ 1.5
TRIM29-221ENST00000627238 RAB3GAP2Q9H2M9 1393 aa24.41■■□□□ 1.5
TRIM29-221ENST00000627238 PRAM1Q96QH2 718 aa24.4■■□□□ 1.5
TRIM29-221ENST00000627238 ARHGEF10O15013 1369 aa24.39■■□□□ 1.49
TRIM29-221ENST00000627238 PLCH1Q4KWH8 1693 aa24.37■■□□□ 1.49
TRIM29-221ENST00000627238 TRPM3Q9HCF6 1732 aaPredicted RBP24.35■■□□□ 1.49
TRIM29-221ENST00000627238 STAC3Q96MF2 364 aa24.35■■□□□ 1.49
TRIM29-221ENST00000627238 VPS72Q15906 364 aa24.34■■□□□ 1.49
TRIM29-221ENST00000627238 EIF3AQ14152 1382 aaKnown RBP24.33■■□□□ 1.49
TRIM29-221ENST00000627238 BRWD3Q6RI45 1802 aa24.33■■□□□ 1.48
TRIM29-221ENST00000627238 ALS2Q96Q42 1657 aa24.32■■□□□ 1.48
TRIM29-221ENST00000627238 ONECUT3O60422 494 aaPredicted RBP24.32■■□□□ 1.48
TRIM29-221ENST00000627238 POGKQ9P215 609 aa24.32■■□□□ 1.48
TRIM29-221ENST00000627238 TULP4Q9NRJ4 1543 aa24.31■■□□□ 1.48
TRIM29-221ENST00000627238 BLMP54132 1417 aaPredicted RBP24.31■■□□□ 1.48
TRIM29-221ENST00000627238 SAFB2Q14151 953 aaKnown RBP eCLIP24.31■■□□□ 1.48
TRIM29-221ENST00000627238 HRCP23327 699 aa24.3■■□□□ 1.48
TRIM29-221ENST00000627238 CABLES1Q8TDN4 633 aa24.29■■□□□ 1.48
TRIM29-221ENST00000627238 ZRANB1Q9UGI0 708 aa24.29■■□□□ 1.48
TRIM29-221ENST00000627238 NRAPQ86VF7 1730 aa24.28■■□□□ 1.48
TRIM29-221ENST00000627238 HAP1P54257 671 aaPredicted RBP24.28■■□□□ 1.48
TRIM29-221ENST00000627238 PMFBP1Q8TBY8 1022 aa24.26■■□□□ 1.47
TRIM29-221ENST00000627238 TRAK1Q9UPV9 953 aa24.26■■□□□ 1.47
TRIM29-221ENST00000627238 PRR36Q9H6K5 1346 aa24.26■■□□□ 1.47
TRIM29-221ENST00000627238 CRYBG1Q9Y4K1 1723 aa24.25■■□□□ 1.47
TRIM29-221ENST00000627238 SEPT12Q8IYM1 358 aa24.25■■□□□ 1.47
TRIM29-221ENST00000627238 ARHGEF28Q8N1W1 1705 aaKnown RBP24.24■■□□□ 1.47
TRIM29-221ENST00000627238 COL14A1Q05707 1796 aaKnown RBP24.24■■□□□ 1.47
TRIM29-221ENST00000627238 FAM83GA6ND36 823 aa24.24■■□□□ 1.47
TRIM29-221ENST00000627238 WASLO00401 505 aaPredicted RBP24.24■■□□□ 1.47
TRIM29-221ENST00000627238 GPRASP1Q5JY77 1395 aa24.24■■□□□ 1.47
TRIM29-221ENST00000627238 DCAF11Q8TEB1 546 aa24.23■■□□□ 1.47
TRIM29-221ENST00000627238 LMOD2Q6P5Q4 547 aa24.22■■□□□ 1.47
TRIM29-221ENST00000627238 ITSN1Q15811 1721 aa24.21■■□□□ 1.47
TRIM29-221ENST00000627238 MINK1Q8N4C8 1332 aaPredicted RBP24.21■■□□□ 1.47
TRIM29-221ENST00000627238 HIRIP3Q9BW71 556 aaPredicted RBP24.21■■□□□ 1.47
TRIM29-221ENST00000627238 ATP7BP35670 1465 aa24.19■■□□□ 1.46
TRIM29-221ENST00000627238 KRT27Q7Z3Y8 459 aa24.18■■□□□ 1.46
TRIM29-221ENST00000627238 KDM2AQ9Y2K7 1162 aa24.18■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms