RNA–Protein interactions for RNA: ENST00000627002.1

PTP4A1-206, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 5 BASIC

Gene PTP4A1, Length 447 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-206ENST00000627002 BCANQ96GW7 911 aa10.39□□□□□ -0.75
PTP4A1-206ENST00000627002 LTKP29376 864 aa10.38□□□□□ -0.75
PTP4A1-206ENST00000627002 PUS7Q96PZ0 661 aaKnown RBP10.38□□□□□ -0.75
PTP4A1-206ENST00000627002 STK26Q9P289 416 aa10.38□□□□□ -0.75
PTP4A1-206ENST00000627002 ABCC11Q96J66 1382 aa10.38□□□□□ -0.75
PTP4A1-206ENST00000627002 DLC1Q96QB1 1528 aa10.38□□□□□ -0.75
PTP4A1-206ENST00000627002 ZNF142P52746 1687 aaPredicted RBP10.38□□□□□ -0.75
PTP4A1-206ENST00000627002 NRXN3Q9Y4C0 1643 aa10.36□□□□□ -0.75
PTP4A1-206ENST00000627002 EVC2Q86UK5 1308 aa10.36□□□□□ -0.75
PTP4A1-206ENST00000627002 ADAMTS13Q76LX8 1427 aa10.36□□□□□ -0.75
PTP4A1-206ENST00000627002 CCER2I3L3R5 266 aa10.36□□□□□ -0.75
PTP4A1-206ENST00000627002 ABCB7O75027 752 aa10.36□□□□□ -0.75
PTP4A1-206ENST00000627002 SIRT1Q96EB6 747 aa10.36□□□□□ -0.75
PTP4A1-206ENST00000627002 POGKQ9P215 609 aa10.36□□□□□ -0.75
PTP4A1-206ENST00000627002 ZNF219Q9P2Y4 722 aaPredicted RBP10.36□□□□□ -0.75
PTP4A1-206ENST00000627002 DIP2AQ14689 1571 aa10.35□□□□□ -0.75
PTP4A1-206ENST00000627002 TECPR2O15040 1411 aa10.35□□□□□ -0.75
PTP4A1-206ENST00000627002 ANKLE2Q86XL3 938 aa10.35□□□□□ -0.75
PTP4A1-206ENST00000627002 PRAM1Q96QH2 718 aa10.35□□□□□ -0.75
PTP4A1-206ENST00000627002 TBX22Q9Y458 520 aa10.35□□□□□ -0.75
PTP4A1-206ENST00000627002 METP08581 1390 aa10.35□□□□□ -0.75
PTP4A1-206ENST00000627002 ARHGEF28Q8N1W1 1705 aaKnown RBP10.35□□□□□ -0.75
PTP4A1-206ENST00000627002 MED14O60244 1454 aa10.35□□□□□ -0.75
PTP4A1-206ENST00000627002 QRICH2Q9H0J4 1663 aa10.34□□□□□ -0.75
PTP4A1-206ENST00000627002 FAM135BQ49AJ0 1406 aa10.34□□□□□ -0.75
PTP4A1-206ENST00000627002 SETD1AO15047 1707 aaKnown RBP10.34□□□□□ -0.75
PTP4A1-206ENST00000627002 KTN1Q86UP2 1357 aaKnown RBP10.33□□□□□ -0.76
PTP4A1-206ENST00000627002 PIK3R4Q99570 1358 aa10.32□□□□□ -0.76
PTP4A1-206ENST00000627002 PRKRIP1Q9H875 184 aaPredicted RBP10.32□□□□□ -0.76
PTP4A1-206ENST00000627002 PANK3Q9H999 370 aa10.32□□□□□ -0.76
PTP4A1-206ENST00000627002 ATF5Q9Y2D1 282 aaPredicted RBP10.32□□□□□ -0.76
PTP4A1-206ENST00000627002 CPS1P31327 1500 aa10.32□□□□□ -0.76
PTP4A1-206ENST00000627002 NINLQ9Y2I6 1382 aa10.31□□□□□ -0.76
PTP4A1-206ENST00000627002 KNDC1Q76NI1 1749 aa10.31□□□□□ -0.76
PTP4A1-206ENST00000627002 SAFB2Q14151 953 aaKnown RBP eCLIP10.31□□□□□ -0.76
PTP4A1-206ENST00000627002 SLC26A8Q96RN1 970 aa10.31□□□□□ -0.76
PTP4A1-206ENST00000627002 IQSEC2Q5JU85 1478 aa10.3□□□□□ -0.76
PTP4A1-206ENST00000627002 SETD1BQ9UPS6 1966 aaKnown RBP10.3□□□□□ -0.76
PTP4A1-206ENST00000627002 ATAD2Q6PL18 1390 aa10.3□□□□□ -0.76
PTP4A1-206ENST00000627002 TULP4Q9NRJ4 1543 aa10.3□□□□□ -0.76
PTP4A1-206ENST00000627002 PER1O15534 1290 aaPredicted RBP10.3□□□□□ -0.76
PTP4A1-206ENST00000627002 RALBP1Q15311 655 aa10.3□□□□□ -0.76
PTP4A1-206ENST00000627002 MINK1Q8N4C8 1332 aaPredicted RBP10.3□□□□□ -0.76
PTP4A1-206ENST00000627002 SRPK2P78362 688 aaKnown RBP10.29□□□□□ -0.76
PTP4A1-206ENST00000627002 WAPLQ7Z5K2 1190 aa10.29□□□□□ -0.76
PTP4A1-206ENST00000627002 KNSTRNQ9Y448 316 aa10.29□□□□□ -0.76
PTP4A1-206ENST00000627002 PTCH1Q13635 1447 aa10.29□□□□□ -0.76
PTP4A1-206ENST00000627002 NPHP4O75161 1426 aaPredicted RBP10.28□□□□□ -0.76
PTP4A1-206ENST00000627002 UBAP1LF5GYI3 381 aa10.28□□□□□ -0.76
PTP4A1-206ENST00000627002 AMOTL2Q9Y2J4 779 aa10.28□□□□□ -0.76
PTP4A1-206ENST00000627002 ROBO2Q9HCK4 1378 aa10.27□□□□□ -0.76
PTP4A1-206ENST00000627002 NPC1L1Q9UHC9 1359 aa10.27□□□□□ -0.76
PTP4A1-206ENST00000627002 PLEKHH1Q9ULM0 1364 aa10.27□□□□□ -0.76
PTP4A1-206ENST00000627002 PTPRUQ92729 1446 aa10.27□□□□□ -0.77
PTP4A1-206ENST00000627002 TMC1Q8TDI8 760 aa10.27□□□□□ -0.77
PTP4A1-206ENST00000627002 CDK19Q9BWU1 502 aa10.27□□□□□ -0.77
PTP4A1-206ENST00000627002 MYOM1P52179 1685 aa10.27□□□□□ -0.77
PTP4A1-206ENST00000627002 WASLO00401 505 aaPredicted RBP10.26□□□□□ -0.77
PTP4A1-206ENST00000627002 CABP2Q9NPB3 220 aa10.26□□□□□ -0.77
PTP4A1-206ENST00000627002 STRCQ7RTU9 1775 aa10.26□□□□□ -0.77
PTP4A1-206ENST00000627002 ANKRD36BQ8N2N9 1353 aa10.26□□□□□ -0.77
PTP4A1-206ENST00000627002 PARD3Q8TEW0 1356 aa10.26□□□□□ -0.77
PTP4A1-206ENST00000627002 SLC12A5Q9H2X9 1139 aa10.25□□□□□ -0.77
PTP4A1-206ENST00000627002 MYBBP1AQ9BQG0 1328 aaKnown RBP10.25□□□□□ -0.77
PTP4A1-206ENST00000627002 ADGRB2O60241 1585 aa10.24□□□□□ -0.77
PTP4A1-206ENST00000627002 AMER1Q5JTC6 1135 aaPredicted RBP10.24□□□□□ -0.77
PTP4A1-206ENST00000627002 TERF2IPQ9NYB0 399 aa10.24□□□□□ -0.77
PTP4A1-206ENST00000627002 LTBP4Q8N2S1 1624 aa10.24□□□□□ -0.77
PTP4A1-206ENST00000627002 NCKAP5LQ9HCH0 1330 aa10.24□□□□□ -0.77
PTP4A1-206ENST00000627002 XRN1Q8IZH2 1706 aaKnown RBP10.24□□□□□ -0.77
PTP4A1-206ENST00000627002 CENPBP07199 599 aaPredicted RBP10.23□□□□□ -0.77
PTP4A1-206ENST00000627002 HDGFL2Q7Z4V5 671 aaPredicted RBP10.23□□□□□ -0.77
PTP4A1-206ENST00000627002 CARD14Q9BXL6 1004 aa10.23□□□□□ -0.77
PTP4A1-206ENST00000627002 MRS2Q9HD23 443 aa10.23□□□□□ -0.77
PTP4A1-206ENST00000627002 BRD4O60885 1362 aaPredicted RBP10.23□□□□□ -0.77
PTP4A1-206ENST00000627002 KCNA6P17658 529 aa10.22□□□□□ -0.77
PTP4A1-206ENST00000627002 CNGB1Q14028 1251 aaPredicted RBP10.22□□□□□ -0.77
PTP4A1-206ENST00000627002 CC2D1BQ5T0F9 858 aaKnown RBP10.22□□□□□ -0.77
PTP4A1-206ENST00000627002 NLRP13Q86W25 1043 aa10.22□□□□□ -0.77
PTP4A1-206ENST00000627002 YTHDC1Q96MU7 727 aaKnown RBP10.22□□□□□ -0.77
PTP4A1-206ENST00000627002 ZNF335Q9H4Z2 1342 aaPredicted RBP10.22□□□□□ -0.77
PTP4A1-206ENST00000627002 NSD3Q9BZ95 1437 aa10.22□□□□□ -0.77
PTP4A1-206ENST00000627002 CGNL1Q0VF96 1302 aa10.21□□□□□ -0.78
PTP4A1-206ENST00000627002 NSD2O96028 1365 aa10.21□□□□□ -0.78
PTP4A1-206ENST00000627002 ATP7BP35670 1465 aa10.21□□□□□ -0.78
PTP4A1-206ENST00000627002 A0A1W2PP64 1363 aa10.2□□□□□ -0.78
PTP4A1-206ENST00000627002 NUDT16Q96DE0 195 aaKnown RBP10.2□□□□□ -0.78
PTP4A1-206ENST00000627002 CABP1Q9NZU7 370 aa10.2□□□□□ -0.78
PTP4A1-206ENST00000627002 CCDC61Q9Y6R9 512 aa10.2□□□□□ -0.78
PTP4A1-206ENST00000627002 USP32Q8NFA0 1604 aa10.19□□□□□ -0.78
PTP4A1-206ENST00000627002 PPIP5K1Q6PFW1 1433 aa10.19□□□□□ -0.78
PTP4A1-206ENST00000627002 TOM1O60784 492 aa10.19□□□□□ -0.78
PTP4A1-206ENST00000627002 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.19□□□□□ -0.78
PTP4A1-206ENST00000627002 NWD1Q149M9 1564 aa10.18□□□□□ -0.78
PTP4A1-206ENST00000627002 CD163L1Q9NR16 1453 aa10.18□□□□□ -0.78
PTP4A1-206ENST00000627002 ANKARQ7Z5J8 1434 aa10.17□□□□□ -0.78
PTP4A1-206ENST00000627002 CHD2O14647 1828 aaKnown RBP10.17□□□□□ -0.78
PTP4A1-206ENST00000627002 PIP4K2BP78356 416 aa10.17□□□□□ -0.78
PTP4A1-206ENST00000627002 CCDC184Q52MB2 194 aa10.17□□□□□ -0.78
PTP4A1-206ENST00000627002 MORC1Q86VD1 984 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms