RNA–Protein interactions for RNA: ENST00000626215.1

LSINCT5-201, long stress-induced non-coding transcript 5, humanhuman

BASIC

Gene LSINCT5, Length 2,647 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSINCT5-201ENST00000626215 PRAG1Q86YV5 1406 aa17.05■□□□□ 0.32
LSINCT5-201ENST00000626215 HSPA5P11021 654 aaKnown RBP17.04■□□□□ 0.32
LSINCT5-201ENST00000626215 NKTRP30414 1462 aaKnown RBP17.04■□□□□ 0.32
LSINCT5-201ENST00000626215 SLC26A8Q96RN1 970 aa17.04■□□□□ 0.32
LSINCT5-201ENST00000626215 RBM19Q9Y4C8 960 aaKnown RBP17.04■□□□□ 0.32
LSINCT5-201ENST00000626215 ASXL1Q8IXJ9 1541 aa17.04■□□□□ 0.32
LSINCT5-201ENST00000626215 DCAF11Q8TEB1 546 aa17.03■□□□□ 0.32
LSINCT5-201ENST00000626215 ZNF335Q9H4Z2 1342 aaPredicted RBP17.03■□□□□ 0.32
LSINCT5-201ENST00000626215 KNDC1Q76NI1 1749 aa17.03■□□□□ 0.32
LSINCT5-201ENST00000626215 IQSEC2Q5JU85 1478 aa17.02■□□□□ 0.31
LSINCT5-201ENST00000626215 PTPRUQ92729 1446 aa17.01■□□□□ 0.31
LSINCT5-201ENST00000626215 METP08581 1390 aa17.01■□□□□ 0.31
LSINCT5-201ENST00000626215 KCNA6P17658 529 aa17.01■□□□□ 0.31
LSINCT5-201ENST00000626215 XIRP1Q702N8 1843 aaKnown RBP17.01■□□□□ 0.31
LSINCT5-201ENST00000626215 EIF4G2P78344 907 aaKnown RBP eCLIP17■□□□□ 0.31
LSINCT5-201ENST00000626215 C14orf93Q9H972 538 aaKnown RBP17■□□□□ 0.31
LSINCT5-201ENST00000626215 ADGRB1O14514 1584 aa17■□□□□ 0.31
LSINCT5-201ENST00000626215 TRPM1Q7Z4N2 1603 aa16.99■□□□□ 0.31
LSINCT5-201ENST00000626215 MSH5O43196 834 aa16.99■□□□□ 0.31
LSINCT5-201ENST00000626215 LRRC7Q96NW7 1537 aa16.99■□□□□ 0.31
LSINCT5-201ENST00000626215 KDM2AQ9Y2K7 1162 aa16.97■□□□□ 0.31
LSINCT5-201ENST00000626215 TECPR2O15040 1411 aa16.97■□□□□ 0.31
LSINCT5-201ENST00000626215 PTCH1Q13635 1447 aa16.97■□□□□ 0.31
LSINCT5-201ENST00000626215 ZMYND15Q9H091 742 aa16.96■□□□□ 0.31
LSINCT5-201ENST00000626215 SENP3Q9H4L4 574 aaPredicted RBP16.96■□□□□ 0.31
LSINCT5-201ENST00000626215 WASHC2AQ641Q2 1341 aa16.95■□□□□ 0.3
LSINCT5-201ENST00000626215 NCOA3Q9Y6Q9 1424 aa16.95■□□□□ 0.3
LSINCT5-201ENST00000626215 LRPPRCP42704 1394 aaKnown RBP16.94■□□□□ 0.3
LSINCT5-201ENST00000626215 DLC1Q96QB1 1528 aa16.94■□□□□ 0.3
LSINCT5-201ENST00000626215 CFAP70Q5T0N1 1121 aa16.94■□□□□ 0.3
LSINCT5-201ENST00000626215 CHMP4AQ9BY43 222 aa16.94■□□□□ 0.3
LSINCT5-201ENST00000626215 YTHDC2Q9H6S0 1430 aaKnown RBP16.94■□□□□ 0.3
LSINCT5-201ENST00000626215 AMOTL2Q9Y2J4 779 aa16.93■□□□□ 0.3
LSINCT5-201ENST00000626215 ABCC11Q96J66 1382 aa16.93■□□□□ 0.3
LSINCT5-201ENST00000626215 ANP32CO43423 234 aa16.92■□□□□ 0.3
LSINCT5-201ENST00000626215 C11orf95C9JLR9 678 aaPredicted RBP16.91■□□□□ 0.3
LSINCT5-201ENST00000626215 CERKQ8TCT0 537 aa16.91■□□□□ 0.3
LSINCT5-201ENST00000626215 ARHGEF28Q8N1W1 1705 aaKnown RBP16.91■□□□□ 0.3
LSINCT5-201ENST00000626215 BCL11BQ9C0K0 894 aaPredicted RBP16.91■□□□□ 0.3
LSINCT5-201ENST00000626215 RALGAPBQ86X10 1494 aa16.9■□□□□ 0.3
LSINCT5-201ENST00000626215 AAMPQ13685 434 aa16.9■□□□□ 0.3
LSINCT5-201ENST00000626215 VSIG10Q8N0Z9 540 aa16.9■□□□□ 0.3
LSINCT5-201ENST00000626215 TAF7LQ5H9L4 462 aa16.89■□□□□ 0.29
LSINCT5-201ENST00000626215 FAM135BQ49AJ0 1406 aa16.89■□□□□ 0.29
LSINCT5-201ENST00000626215 NALCNQ8IZF0 1738 aa16.89■□□□□ 0.29
LSINCT5-201ENST00000626215 SIRT1Q96EB6 747 aa16.89■□□□□ 0.29
LSINCT5-201ENST00000626215 TMEM94Q12767 1356 aa16.89■□□□□ 0.29
LSINCT5-201ENST00000626215 GPRASP1Q5JY77 1395 aa16.89■□□□□ 0.29
LSINCT5-201ENST00000626215 FANCIQ9NVI1 1328 aa16.88■□□□□ 0.29
LSINCT5-201ENST00000626215 ROBO2Q9HCK4 1378 aa16.88■□□□□ 0.29
LSINCT5-201ENST00000626215 TMEM132EQ6IEE7 984 aa16.88■□□□□ 0.29
LSINCT5-201ENST00000626215 A0A0U1RQG5 324 aaPredicted RBP16.87■□□□□ 0.29
LSINCT5-201ENST00000626215 PROSER2Q86WR7 435 aaPredicted RBP16.87■□□□□ 0.29
LSINCT5-201ENST00000626215 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.86■□□□□ 0.29
LSINCT5-201ENST00000626215 DCCP43146 1447 aa16.84■□□□□ 0.29
LSINCT5-201ENST00000626215 IL27Q8NEV9 243 aa16.84■□□□□ 0.29
LSINCT5-201ENST00000626215 ADGRL3Q9HAR2 1447 aa16.84■□□□□ 0.29
LSINCT5-201ENST00000626215 CCDC7Q96M83 1385 aa16.84■□□□□ 0.29
LSINCT5-201ENST00000626215 ADGRB2O60241 1585 aa16.84■□□□□ 0.29
LSINCT5-201ENST00000626215 USP47Q96K76 1375 aa16.84■□□□□ 0.29
LSINCT5-201ENST00000626215 NBPF1Q3BBV0 1214 aa16.83■□□□□ 0.29
LSINCT5-201ENST00000626215 ROCK2O75116 1388 aaKnown RBP16.83■□□□□ 0.28
LSINCT5-201ENST00000626215 CDC42BPGQ6DT37 1551 aa16.82■□□□□ 0.28
LSINCT5-201ENST00000626215 KIF7Q2M1P5 1343 aa16.81■□□□□ 0.28
LSINCT5-201ENST00000626215 RBM10P98175 930 aaKnown RBP16.81■□□□□ 0.28
LSINCT5-201ENST00000626215 STK26Q9P289 416 aa16.81■□□□□ 0.28
LSINCT5-201ENST00000626215 MSH6P52701 1360 aa16.81■□□□□ 0.28
LSINCT5-201ENST00000626215 CARD11Q9BXL7 1154 aa16.81■□□□□ 0.28
LSINCT5-201ENST00000626215 SAMD1Q6SPF0 538 aaPredicted RBP16.8■□□□□ 0.28
LSINCT5-201ENST00000626215 POLR3GLQ9BT43 218 aa16.8■□□□□ 0.28
LSINCT5-201ENST00000626215 PLEKHH1Q9ULM0 1364 aa16.8■□□□□ 0.28
LSINCT5-201ENST00000626215 CCER2I3L3R5 266 aa16.8■□□□□ 0.28
LSINCT5-201ENST00000626215 QRICH2Q9H0J4 1663 aa16.79■□□□□ 0.28
LSINCT5-201ENST00000626215 C19orf44Q9H6X5 657 aa16.78■□□□□ 0.28
LSINCT5-201ENST00000626215 FMN2Q9NZ56 1722 aa16.78■□□□□ 0.28
LSINCT5-201ENST00000626215 TRAK1Q9UPV9 953 aa16.78■□□□□ 0.28
LSINCT5-201ENST00000626215 RBM33Q96EV2 1170 aaKnown RBP16.77■□□□□ 0.28
LSINCT5-201ENST00000626215 WAPLQ7Z5K2 1190 aa16.76■□□□□ 0.27
LSINCT5-201ENST00000626215 PRAM1Q96QH2 718 aa16.76■□□□□ 0.27
LSINCT5-201ENST00000626215 EIF3AQ14152 1382 aaKnown RBP16.75■□□□□ 0.27
LSINCT5-201ENST00000626215 ZBTB22O15209 634 aa16.75■□□□□ 0.27
LSINCT5-201ENST00000626215 TOM1O60784 492 aa16.73■□□□□ 0.27
LSINCT5-201ENST00000626215 CADPS2Q86UW7 1296 aa16.73■□□□□ 0.27
LSINCT5-201ENST00000626215 MST1RQ04912 1400 aa16.73■□□□□ 0.27
LSINCT5-201ENST00000626215 ST20-MTHFSA0A0A6YYL1 179 aa16.72■□□□□ 0.27
LSINCT5-201ENST00000626215 POGKQ9P215 609 aa16.72■□□□□ 0.27
LSINCT5-201ENST00000626215 CNGB1Q14028 1251 aaPredicted RBP16.72■□□□□ 0.27
LSINCT5-201ENST00000626215 SBNO2Q9Y2G9 1366 aa16.71■□□□□ 0.27
LSINCT5-201ENST00000626215 CENPJQ9HC77 1338 aaPredicted RBP16.71■□□□□ 0.27
LSINCT5-201ENST00000626215 DHX37Q8IY37 1157 aaKnown RBP16.71■□□□□ 0.27
LSINCT5-201ENST00000626215 FBXO41Q8TF61 875 aa16.71■□□□□ 0.27
LSINCT5-201ENST00000626215 UBAP1LF5GYI3 381 aa16.71■□□□□ 0.27
LSINCT5-201ENST00000626215 ROBO1Q9Y6N7 1651 aa16.71■□□□□ 0.27
LSINCT5-201ENST00000626215 ATF3P18847 181 aa16.7■□□□□ 0.26
LSINCT5-201ENST00000626215 USP32Q8NFA0 1604 aa16.7■□□□□ 0.26
LSINCT5-201ENST00000626215 RSPH6AQ9H0K4 717 aa16.69■□□□□ 0.26
LSINCT5-201ENST00000626215 TULP4Q9NRJ4 1543 aa16.69■□□□□ 0.26
LSINCT5-201ENST00000626215 CNKSR2Q8WXI2 1034 aa16.69■□□□□ 0.26
LSINCT5-201ENST00000626215 C1orf167Q5SNV9 1468 aa16.69■□□□□ 0.26
LSINCT5-201ENST00000626215 ITSN1Q15811 1721 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms