RNA–Protein interactions for RNA: ENST00000626215.1

LSINCT5-201, long stress-induced non-coding transcript 5, humanhuman

BASIC

Gene LSINCT5, Length 2,647 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSINCT5-201ENST00000626215 NISCHQ9Y2I1 1504 aa28.41■■■□□ 2.14
LSINCT5-201ENST00000626215 CCDC180Q9P1Z9 1646 aa25.26■■□□□ 1.63
LSINCT5-201ENST00000626215 ABCC9O60706 1549 aa24.29■■□□□ 1.48
LSINCT5-201ENST00000626215 ZCCHC6Q5VYS8 1495 aaKnown RBP23.74■■□□□ 1.39
LSINCT5-201ENST00000626215 NACADO15069 1562 aa23.64■■□□□ 1.37
LSINCT5-201ENST00000626215 MYO15BQ96JP2 1530 aa23.63■■□□□ 1.37
LSINCT5-201ENST00000626215 DCAF1Q9Y4B6 1507 aa23.6■■□□□ 1.37
LSINCT5-201ENST00000626215 RB1CC1Q8TDY2 1594 aa23.59■■□□□ 1.37
LSINCT5-201ENST00000626215 DCAF8L2P0C7V8 631 aa23.38■■□□□ 1.33
LSINCT5-201ENST00000626215 UNC13AQ9UPW8 1703 aa23.12■■□□□ 1.29
LSINCT5-201ENST00000626215 SCRIBQ14160 1630 aa22.93■■□□□ 1.26
LSINCT5-201ENST00000626215 BICRAQ9NZM4 1560 aa22.88■■□□□ 1.25
LSINCT5-201ENST00000626215 SHROOM4Q9ULL8 1493 aa22.73■■□□□ 1.23
LSINCT5-201ENST00000626215 PABPN1Q86U42 306 aaKnown RBP eCLIP22.66■■□□□ 1.22
LSINCT5-201ENST00000626215 EIF4G1Q04637 1599 aaKnown RBP22.23■■□□□ 1.15
LSINCT5-201ENST00000626215 SLC24A1O60721 1099 aa22.09■■□□□ 1.13
LSINCT5-201ENST00000626215 CC2D2AQ9P2K1 1620 aa22.07■■□□□ 1.12
LSINCT5-201ENST00000626215 DNAJC5BQ9UF47 199 aa22.05■■□□□ 1.12
LSINCT5-201ENST00000626215 CECR2Q9BXF3 1484 aa22.04■■□□□ 1.12
LSINCT5-201ENST00000626215 SMARCA4P51532 1647 aa22.02■■□□□ 1.12
LSINCT5-201ENST00000626215 BAZ1AQ9NRL2 1556 aaPredicted RBP22.02■■□□□ 1.11
LSINCT5-201ENST00000626215 MROH2BQ7Z745 1585 aa21.86■■□□□ 1.09
LSINCT5-201ENST00000626215 PEG3Q9GZU2 1588 aa21.85■■□□□ 1.09
LSINCT5-201ENST00000626215 SMARCA2P51531 1590 aa21.82■■□□□ 1.08
LSINCT5-201ENST00000626215 ATAD2BQ9ULI0 1458 aa21.8■■□□□ 1.08
LSINCT5-201ENST00000626215 NCAPD3P42695 1498 aa21.77■■□□□ 1.08
LSINCT5-201ENST00000626215 PELP1Q8IZL8 1130 aaKnown RBP21.77■■□□□ 1.08
LSINCT5-201ENST00000626215 HMGXB3Q12766 1538 aa21.74■■□□□ 1.07
LSINCT5-201ENST00000626215 RSF1Q96T23 1441 aaPredicted RBP21.69■■□□□ 1.06
LSINCT5-201ENST00000626215 WIZO95785 1651 aa21.65■■□□□ 1.06
LSINCT5-201ENST00000626215 BAZ1BQ9UIG0 1483 aaKnown RBP21.62■■□□□ 1.05
LSINCT5-201ENST00000626215 MYT1Q01538 1121 aa21.54■■□□□ 1.04
LSINCT5-201ENST00000626215 TOP2AP11388 1531 aaKnown RBP21.48■■□□□ 1.03
LSINCT5-201ENST00000626215 SUPT5HO00267 1087 aaKnown RBP21.39■■□□□ 1.01
LSINCT5-201ENST00000626215 LAMC3Q9Y6N6 1575 aa21.19■□□□□ 0.98
LSINCT5-201ENST00000626215 CCDC88BA6NC98 1476 aa21.16■□□□□ 0.98
LSINCT5-201ENST00000626215 NESP48681 1621 aa21.11■□□□□ 0.97
LSINCT5-201ENST00000626215 CADPSQ9ULU8 1353 aa21.1■□□□□ 0.97
LSINCT5-201ENST00000626215 CFTRP13569 1480 aa21.06■□□□□ 0.96
LSINCT5-201ENST00000626215 PRDM2Q13029 1718 aa21.06■□□□□ 0.96
LSINCT5-201ENST00000626215 PDS5BQ9NTI5 1447 aa20.97■□□□□ 0.95
LSINCT5-201ENST00000626215 KIF21AQ7Z4S6 1674 aa20.96■□□□□ 0.95
LSINCT5-201ENST00000626215 ERCC6Q03468 1493 aa20.93■□□□□ 0.94
LSINCT5-201ENST00000626215 FANCD2Q9BXW9 1451 aa20.87■□□□□ 0.93
LSINCT5-201ENST00000626215 THOC2Q8NI27 1593 aaKnown RBP20.86■□□□□ 0.93
LSINCT5-201ENST00000626215 CEP164Q9UPV0 1460 aa20.83■□□□□ 0.92
LSINCT5-201ENST00000626215 TTBK1Q5TCY1 1321 aaPredicted RBP20.79■□□□□ 0.92
LSINCT5-201ENST00000626215 MRC2Q9UBG0 1479 aa20.77■□□□□ 0.92
LSINCT5-201ENST00000626215 WDR62O43379 1518 aa20.74■□□□□ 0.91
LSINCT5-201ENST00000626215 CUX2O14529 1486 aa20.72■□□□□ 0.91
LSINCT5-201ENST00000626215 URB2Q14146 1524 aaKnown RBP20.66■□□□□ 0.9
LSINCT5-201ENST00000626215 ABCC8Q09428 1581 aa20.62■□□□□ 0.89
LSINCT5-201ENST00000626215 DNMBPQ6XZF7 1577 aa20.61■□□□□ 0.89
LSINCT5-201ENST00000626215 TOPBP1Q92547 1522 aa20.58■□□□□ 0.89
LSINCT5-201ENST00000626215 CHIC1Q5VXU3 224 aa20.52■□□□□ 0.88
LSINCT5-201ENST00000626215 CUX1P39880 1505 aa20.51■□□□□ 0.87
LSINCT5-201ENST00000626215 BIVM-ERCC5R4GMW8 1640 aa20.47■□□□□ 0.87
LSINCT5-201ENST00000626215 TOP2BQ02880 1626 aa20.44■□□□□ 0.86
LSINCT5-201ENST00000626215 WRNQ14191 1432 aaPredicted RBP eCLIP20.43■□□□□ 0.86
LSINCT5-201ENST00000626215 SYNJ1O43426 1573 aa20.41■□□□□ 0.86
LSINCT5-201ENST00000626215 POLA1P09884 1462 aaPredicted RBP20.41■□□□□ 0.86
LSINCT5-201ENST00000626215 IFT140Q96RY7 1462 aa20.4■□□□□ 0.86
LSINCT5-201ENST00000626215 FGD5Q6ZNL6 1462 aa20.39■□□□□ 0.85
LSINCT5-201ENST00000626215 TARBP1Q13395 1621 aaKnown RBP20.39■□□□□ 0.85
LSINCT5-201ENST00000626215 WDR97A6NE52 1622 aa20.33■□□□□ 0.84
LSINCT5-201ENST00000626215 SOGA1O94964 1423 aa20.29■□□□□ 0.84
LSINCT5-201ENST00000626215 RAD54L2Q9Y4B4 1467 aa20.27■□□□□ 0.84
LSINCT5-201ENST00000626215 ABCA10Q8WWZ4 1543 aa20.24■□□□□ 0.83
LSINCT5-201ENST00000626215 EIF4G3O43432 1585 aaKnown RBP20.24■□□□□ 0.83
LSINCT5-201ENST00000626215 DAXXQ9UER7 740 aaPredicted RBP20.24■□□□□ 0.83
LSINCT5-201ENST00000626215 ZNF608Q9ULD9 1512 aaPredicted RBP20.24■□□□□ 0.83
LSINCT5-201ENST00000626215 ABCA5Q8WWZ7 1642 aa20.18■□□□□ 0.82
LSINCT5-201ENST00000626215 AQRO60306 1485 aaKnown RBP eCLIP20.13■□□□□ 0.81
LSINCT5-201ENST00000626215 PBRM1Q86U86 1689 aa20.12■□□□□ 0.81
LSINCT5-201ENST00000626215 TDRD9Q8NDG6 1382 aaKnown RBP20.1■□□□□ 0.81
LSINCT5-201ENST00000626215 PRKCSHP14314 528 aaPredicted RBP20.1■□□□□ 0.81
LSINCT5-201ENST00000626215 GAPVD1Q14C86 1478 aa20.09■□□□□ 0.81
LSINCT5-201ENST00000626215 GRIN2BQ13224 1484 aa20.06■□□□□ 0.8
LSINCT5-201ENST00000626215 MAGI1Q96QZ7 1491 aaPredicted RBP20.02■□□□□ 0.8
LSINCT5-201ENST00000626215 ERICH3Q5RHP9 1530 aa20.02■□□□□ 0.8
LSINCT5-201ENST00000626215 EHMT2Q96KQ7 1210 aa20.01■□□□□ 0.79
LSINCT5-201ENST00000626215 TRIM41Q8WV44 630 aa20■□□□□ 0.79
LSINCT5-201ENST00000626215 SNAPC4Q5SXM2 1469 aa19.99■□□□□ 0.79
LSINCT5-201ENST00000626215 KIF27Q86VH2 1401 aa19.99■□□□□ 0.79
LSINCT5-201ENST00000626215 CHD1O14646 1710 aa19.96■□□□□ 0.79
LSINCT5-201ENST00000626215 ADAMTS12P58397 1594 aa19.95■□□□□ 0.78
LSINCT5-201ENST00000626215 SYNJ2O15056 1496 aa19.92■□□□□ 0.78
LSINCT5-201ENST00000626215 CUL7Q14999 1698 aa19.91■□□□□ 0.78
LSINCT5-201ENST00000626215 LOC105371045A0A1W2PR82 267 aa19.9■□□□□ 0.78
LSINCT5-201ENST00000626215 FHAD1B1AJZ9 1412 aa19.88■□□□□ 0.77
LSINCT5-201ENST00000626215 IGF1RP08069 1367 aa19.86■□□□□ 0.77
LSINCT5-201ENST00000626215 ERICH6Q7L0X2 663 aa19.86■□□□□ 0.77
LSINCT5-201ENST00000626215 RUSC2Q8N2Y8 1516 aa19.84■□□□□ 0.77
LSINCT5-201ENST00000626215 GRIN2AQ12879 1464 aa19.82■□□□□ 0.76
LSINCT5-201ENST00000626215 EEA1Q15075 1411 aa19.8■□□□□ 0.76
LSINCT5-201ENST00000626215 HRCP23327 699 aa19.78■□□□□ 0.76
LSINCT5-201ENST00000626215 OSCARQ8IYS5 282 aa19.78■□□□□ 0.76
LSINCT5-201ENST00000626215 FAM9AQ8IZU1 332 aaPredicted RBP19.78■□□□□ 0.76
LSINCT5-201ENST00000626215 CHMP7Q8WUX9 453 aaPredicted RBP19.78■□□□□ 0.76
LSINCT5-201ENST00000626215 CLASP1Q7Z460 1538 aa19.76■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 157.8 ms