RNA–Protein interactions for RNA: ENST00000625854.1

LEMD1-209, Transcript of LEM domain containing 1, humanhuman

TSL 4

Gene LEMD1, Length 516 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD1-209ENST00000625854 PTCH1Q13635 1447 aa13.13□□□□□ -0.31
LEMD1-209ENST00000625854 RBM6P78332 1123 aaKnown RBP13.13□□□□□ -0.31
LEMD1-209ENST00000625854 XPCQ01831 940 aaPredicted RBP13.12□□□□□ -0.31
LEMD1-209ENST00000625854 USP21Q9UK80 565 aa13.12□□□□□ -0.31
LEMD1-209ENST00000625854 SOS2Q07890 1332 aaPredicted RBP13.12□□□□□ -0.31
LEMD1-209ENST00000625854 FOXO3O43524 673 aa13.11□□□□□ -0.31
LEMD1-209ENST00000625854 NPHP3Q7Z494 1330 aa13.09□□□□□ -0.31
LEMD1-209ENST00000625854 ANKRD30BQ9BXX2 1392 aa13.08□□□□□ -0.31
LEMD1-209ENST00000625854 PLEKHG5O94827 1062 aa13.07□□□□□ -0.32
LEMD1-209ENST00000625854 TRPC5Q9UL62 973 aaPredicted RBP13.07□□□□□ -0.32
LEMD1-209ENST00000625854 CDK12Q9NYV4 1490 aaPredicted RBP13.07□□□□□ -0.32
LEMD1-209ENST00000625854 LRPPRCP42704 1394 aaKnown RBP13.07□□□□□ -0.32
LEMD1-209ENST00000625854 SPATA31E1Q6ZUB1 1445 aa13.06□□□□□ -0.32
LEMD1-209ENST00000625854 LAMC1P11047 1609 aa13.06□□□□□ -0.32
LEMD1-209ENST00000625854 PLEKHH1Q9ULM0 1364 aa13.06□□□□□ -0.32
LEMD1-209ENST00000625854 SAFB2Q14151 953 aaKnown RBP eCLIP13.05□□□□□ -0.32
LEMD1-209ENST00000625854 FNBP4Q8N3X1 1017 aaPredicted RBP13.05□□□□□ -0.32
LEMD1-209ENST00000625854 ABCC11Q96J66 1382 aa13.05□□□□□ -0.32
LEMD1-209ENST00000625854 IFT172Q9UG01 1749 aa13.05□□□□□ -0.32
LEMD1-209ENST00000625854 RGS12O14924 1447 aa13.05□□□□□ -0.32
LEMD1-209ENST00000625854 PRAG1Q86YV5 1406 aa13.05□□□□□ -0.32
LEMD1-209ENST00000625854 CFAP70Q5T0N1 1121 aa13.04□□□□□ -0.32
LEMD1-209ENST00000625854 KRT28Q7Z3Y7 464 aa13.04□□□□□ -0.32
LEMD1-209ENST00000625854 CDC42BPGQ6DT37 1551 aa13.03□□□□□ -0.32
LEMD1-209ENST00000625854 HAP1P54257 671 aaPredicted RBP13.03□□□□□ -0.32
LEMD1-209ENST00000625854 C14orf93Q9H972 538 aaKnown RBP13.03□□□□□ -0.32
LEMD1-209ENST00000625854 ACIN1Q9UKV3 1341 aaKnown RBP13.03□□□□□ -0.32
LEMD1-209ENST00000625854 YTHDC2Q9H6S0 1430 aaKnown RBP13.03□□□□□ -0.32
LEMD1-209ENST00000625854 LMOD2Q6P5Q4 547 aa13.02□□□□□ -0.33
LEMD1-209ENST00000625854 POGKQ9P215 609 aa13.02□□□□□ -0.33
LEMD1-209ENST00000625854 KDM2AQ9Y2K7 1162 aa13.02□□□□□ -0.33
LEMD1-209ENST00000625854 DHX57Q6P158 1386 aaKnown RBP13.02□□□□□ -0.33
LEMD1-209ENST00000625854 RGPD8O14715 1765 aaPredicted RBP13.02□□□□□ -0.33
LEMD1-209ENST00000625854 PSME1Q06323 249 aa13.01□□□□□ -0.33
LEMD1-209ENST00000625854 TECPR2O15040 1411 aa13.01□□□□□ -0.33
LEMD1-209ENST00000625854 PIK3C2GO75747 1445 aa13.01□□□□□ -0.33
LEMD1-209ENST00000625854 PXDNQ92626 1479 aa13.01□□□□□ -0.33
LEMD1-209ENST00000625854 COL22A1Q8NFW1 1626 aaPredicted RBP13□□□□□ -0.33
LEMD1-209ENST00000625854 SIRT1Q96EB6 747 aa13□□□□□ -0.33
LEMD1-209ENST00000625854 PRAM1Q96QH2 718 aa13□□□□□ -0.33
LEMD1-209ENST00000625854 PHF8Q9UPP1 1060 aa13□□□□□ -0.33
LEMD1-209ENST00000625854 KNDC1Q76NI1 1749 aa12.99□□□□□ -0.33
LEMD1-209ENST00000625854 FMN2Q9NZ56 1722 aa12.99□□□□□ -0.33
LEMD1-209ENST00000625854 MARF1Q9Y4F3 1742 aaKnown RBP12.99□□□□□ -0.33
LEMD1-209ENST00000625854 ATAD2Q6PL18 1390 aa12.99□□□□□ -0.33
LEMD1-209ENST00000625854 SPATA31A3Q5VYP0 1347 aa12.99□□□□□ -0.33
LEMD1-209ENST00000625854 GJD4Q96KN9 370 aaPredicted RBP12.99□□□□□ -0.33
LEMD1-209ENST00000625854 RAB3GAP2Q9H2M9 1393 aa12.98□□□□□ -0.33
LEMD1-209ENST00000625854 PMFBP1Q8TBY8 1022 aa12.98□□□□□ -0.33
LEMD1-209ENST00000625854 CABLES1Q8TDN4 633 aa12.98□□□□□ -0.33
LEMD1-209ENST00000625854 TRAK1Q9UPV9 953 aa12.98□□□□□ -0.33
LEMD1-209ENST00000625854 MYOM2P54296 1465 aa12.97□□□□□ -0.33
LEMD1-209ENST00000625854 ATRNO75882 1429 aa12.97□□□□□ -0.33
LEMD1-209ENST00000625854 CCDC9Q9Y3X0 531 aaKnown RBP12.97□□□□□ -0.33
LEMD1-209ENST00000625854 BCL9LQ86UU0 1499 aa12.97□□□□□ -0.33
LEMD1-209ENST00000625854 UNC5CLQ8IV45 518 aa12.96□□□□□ -0.33
LEMD1-209ENST00000625854 DCAF11Q8TEB1 546 aa12.96□□□□□ -0.33
LEMD1-209ENST00000625854 HIRIP3Q9BW71 556 aaPredicted RBP12.96□□□□□ -0.33
LEMD1-209ENST00000625854 KIF1AQ12756 1690 aa12.96□□□□□ -0.34
LEMD1-209ENST00000625854 MINK1Q8N4C8 1332 aaPredicted RBP12.94□□□□□ -0.34
LEMD1-209ENST00000625854 ZRANB1Q9UGI0 708 aa12.93□□□□□ -0.34
LEMD1-209ENST00000625854 NRXN1Q9ULB1 1477 aa12.92□□□□□ -0.34
LEMD1-209ENST00000625854 CCDC125Q86Z20 511 aa12.92□□□□□ -0.34
LEMD1-209ENST00000625854 TNS3Q68CZ2 1445 aa12.91□□□□□ -0.34
LEMD1-209ENST00000625854 A0A0G2JS52 829 aa12.91□□□□□ -0.34
LEMD1-209ENST00000625854 PAK3O75914 559 aaPredicted RBP12.91□□□□□ -0.34
LEMD1-209ENST00000625854 MYT1Q01538 1121 aa12.91□□□□□ -0.34
LEMD1-209ENST00000625854 FAM83GA6ND36 823 aa12.9□□□□□ -0.34
LEMD1-209ENST00000625854 SEPT12Q8IYM1 358 aa12.9□□□□□ -0.34
LEMD1-209ENST00000625854 NGDNQ8NEJ9 315 aaKnown RBP12.9□□□□□ -0.34
LEMD1-209ENST00000625854 SBNO1A3KN83 1393 aa12.9□□□□□ -0.34
LEMD1-209ENST00000625854 RALGAPBQ86X10 1494 aa12.9□□□□□ -0.34
LEMD1-209ENST00000625854 SLIT2O94813 1529 aa12.89□□□□□ -0.35
LEMD1-209ENST00000625854 USP32Q8NFA0 1604 aa12.89□□□□□ -0.35
LEMD1-209ENST00000625854 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.89□□□□□ -0.35
LEMD1-209ENST00000625854 SF3B2Q13435 895 aaKnown RBP12.89□□□□□ -0.35
LEMD1-209ENST00000625854 VPS72Q15906 364 aa12.89□□□□□ -0.35
LEMD1-209ENST00000625854 ARHGEF10O15013 1369 aa12.89□□□□□ -0.35
LEMD1-209ENST00000625854 GPRASP1Q5JY77 1395 aa12.89□□□□□ -0.35
LEMD1-209ENST00000625854 BRWD3Q6RI45 1802 aa12.88□□□□□ -0.35
LEMD1-209ENST00000625854 WASLO00401 505 aaPredicted RBP12.88□□□□□ -0.35
LEMD1-209ENST00000625854 DLC1Q96QB1 1528 aa12.88□□□□□ -0.35
LEMD1-209ENST00000625854 GLI3P10071 1580 aa12.87□□□□□ -0.35
LEMD1-209ENST00000625854 ANKARQ7Z5J8 1434 aa12.87□□□□□ -0.35
LEMD1-209ENST00000625854 KRT27Q7Z3Y8 459 aa12.86□□□□□ -0.35
LEMD1-209ENST00000625854 STAC3Q96MF2 364 aa12.86□□□□□ -0.35
LEMD1-209ENST00000625854 BTG4Q9NY30 223 aa12.86□□□□□ -0.35
LEMD1-209ENST00000625854 PLCH1Q4KWH8 1693 aa12.86□□□□□ -0.35
LEMD1-209ENST00000625854 PRR36Q9H6K5 1346 aa12.86□□□□□ -0.35
LEMD1-209ENST00000625854 EIF3AQ14152 1382 aaKnown RBP12.85□□□□□ -0.35
LEMD1-209ENST00000625854 DEFB132Q7Z7B7 95 aa12.85□□□□□ -0.35
LEMD1-209ENST00000625854 ADGRB1O14514 1584 aa12.85□□□□□ -0.35
LEMD1-209ENST00000625854 HRCP23327 699 aa12.84□□□□□ -0.35
LEMD1-209ENST00000625854 FAM98CQ17RN3 349 aaKnown RBP12.84□□□□□ -0.35
LEMD1-209ENST00000625854 NUDT16Q96DE0 195 aaKnown RBP12.84□□□□□ -0.35
LEMD1-209ENST00000625854 NWD2Q9ULI1 1742 aa12.84□□□□□ -0.35
LEMD1-209ENST00000625854 ABCA3Q99758 1704 aa12.83□□□□□ -0.36
LEMD1-209ENST00000625854 BLMP54132 1417 aaPredicted RBP12.83□□□□□ -0.36
LEMD1-209ENST00000625854 CDK19Q9BWU1 502 aa12.83□□□□□ -0.36
LEMD1-209ENST00000625854 ADGRB2O60241 1585 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms