RNA–Protein interactions for RNA: ENST00000622878.4

DDB2-216, Transcript of damage specific DNA binding protein 2, humanhuman

TSL 4

Gene DDB2, Length 556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB2-216ENST00000622878 LRP6O75581 1613 aa23.5■■□□□ 1.35
DDB2-216ENST00000622878 PLEKHH1Q9ULM0 1364 aa23.49■■□□□ 1.35
DDB2-216ENST00000622878 DDX17Q92841 729 aaKnown RBP23.48■■□□□ 1.35
DDB2-216ENST00000622878 SIRT1Q96EB6 747 aa23.48■■□□□ 1.35
DDB2-216ENST00000622878 ORAI2Q96SN7 254 aa23.48■■□□□ 1.35
DDB2-216ENST00000622878 DHX57Q6P158 1386 aaKnown RBP23.45■■□□□ 1.34
DDB2-216ENST00000622878 ADGRB1O14514 1584 aa23.44■■□□□ 1.34
DDB2-216ENST00000622878 LRRC59Q96AG4 307 aaKnown RBP23.44■■□□□ 1.34
DDB2-216ENST00000622878 POTEAQ6S8J7 498 aa23.43■■□□□ 1.34
DDB2-216ENST00000622878 SOS2Q07890 1332 aaPredicted RBP23.42■■□□□ 1.34
DDB2-216ENST00000622878 DCAF11Q8TEB1 546 aa23.42■■□□□ 1.34
DDB2-216ENST00000622878 STAC3Q96MF2 364 aa23.42■■□□□ 1.34
DDB2-216ENST00000622878 FMN2Q9NZ56 1722 aa23.42■■□□□ 1.34
DDB2-216ENST00000622878 DLC1Q96QB1 1528 aa23.4■■□□□ 1.34
DDB2-216ENST00000622878 PNPLA6Q8IY17 1366 aa23.4■■□□□ 1.34
DDB2-216ENST00000622878 KDM2AQ9Y2K7 1162 aa23.39■■□□□ 1.33
DDB2-216ENST00000622878 ESCO1Q5FWF5 840 aa23.37■■□□□ 1.33
DDB2-216ENST00000622878 PRAM1Q96QH2 718 aa23.36■■□□□ 1.33
DDB2-216ENST00000622878 PXDNQ92626 1479 aa23.35■■□□□ 1.33
DDB2-216ENST00000622878 NUTM2BA6NNL0 878 aaPredicted RBP23.34■■□□□ 1.33
DDB2-216ENST00000622878 NUTM2EB1AL46 878 aaPredicted RBP23.34■■□□□ 1.33
DDB2-216ENST00000622878 MEX3CQ5U5Q3 659 aaKnown RBP23.34■■□□□ 1.33
DDB2-216ENST00000622878 NUTM2AQ8IVF1 878 aaPredicted RBP23.34■■□□□ 1.33
DDB2-216ENST00000622878 NUTM2FA1L443 756 aa23.33■■□□□ 1.33
DDB2-216ENST00000622878 NPHP3Q7Z494 1330 aa23.33■■□□□ 1.32
DDB2-216ENST00000622878 RGPD8O14715 1765 aaPredicted RBP23.32■■□□□ 1.32
DDB2-216ENST00000622878 COL22A1Q8NFW1 1626 aaPredicted RBP23.32■■□□□ 1.32
DDB2-216ENST00000622878 ADGRB2O60241 1585 aa23.31■■□□□ 1.32
DDB2-216ENST00000622878 KIF1AQ12756 1690 aa23.3■■□□□ 1.32
DDB2-216ENST00000622878 FOXO3O43524 673 aa23.3■■□□□ 1.32
DDB2-216ENST00000622878 TRAK1Q9UPV9 953 aa23.3■■□□□ 1.32
DDB2-216ENST00000622878 SAFB2Q14151 953 aaKnown RBP eCLIP23.29■■□□□ 1.32
DDB2-216ENST00000622878 ZNF772Q68DY9 489 aaPredicted RBP23.29■■□□□ 1.32
DDB2-216ENST00000622878 POGKQ9P215 609 aa23.28■■□□□ 1.32
DDB2-216ENST00000622878 KIAA1210Q9ULL0 1709 aa23.28■■□□□ 1.32
DDB2-216ENST00000622878 USP32Q8NFA0 1604 aa23.27■■□□□ 1.32
DDB2-216ENST00000622878 ARHGEF28Q8N1W1 1705 aaKnown RBP23.26■■□□□ 1.31
DDB2-216ENST00000622878 XPCQ01831 940 aaPredicted RBP23.25■■□□□ 1.31
DDB2-216ENST00000622878 AFF2P51816 1311 aa23.24■■□□□ 1.31
DDB2-216ENST00000622878 ANKARQ7Z5J8 1434 aa23.24■■□□□ 1.31
DDB2-216ENST00000622878 PHF8Q9UPP1 1060 aa23.22■■□□□ 1.31
DDB2-216ENST00000622878 C8orf37Q96NL8 207 aa23.21■■□□□ 1.31
DDB2-216ENST00000622878 MINK1Q8N4C8 1332 aaPredicted RBP23.2■■□□□ 1.3
DDB2-216ENST00000622878 ADAMTS2O95450 1211 aa23.2■■□□□ 1.3
DDB2-216ENST00000622878 HIRIP3Q9BW71 556 aaPredicted RBP23.2■■□□□ 1.3
DDB2-216ENST00000622878 SPATA31A3Q5VYP0 1347 aa23.19■■□□□ 1.3
DDB2-216ENST00000622878 KRT28Q7Z3Y7 464 aa23.19■■□□□ 1.3
DDB2-216ENST00000622878 TULP4Q9NRJ4 1543 aa23.18■■□□□ 1.3
DDB2-216ENST00000622878 MARF1Q9Y4F3 1742 aaKnown RBP23.17■■□□□ 1.3
DDB2-216ENST00000622878 PRR36Q9H6K5 1346 aa23.17■■□□□ 1.3
DDB2-216ENST00000622878 WASLO00401 505 aaPredicted RBP23.17■■□□□ 1.3
DDB2-216ENST00000622878 NBPF1Q3BBV0 1214 aa23.17■■□□□ 1.3
DDB2-216ENST00000622878 SIN3AQ96ST3 1273 aa23.17■■□□□ 1.3
DDB2-216ENST00000622878 L3MBTL2Q969R5 705 aa23.16■■□□□ 1.3
DDB2-216ENST00000622878 NGLY1Q96IV0 654 aa23.16■■□□□ 1.3
DDB2-216ENST00000622878 EIF3AQ14152 1382 aaKnown RBP23.15■■□□□ 1.3
DDB2-216ENST00000622878 RXRBP28702 533 aa23.15■■□□□ 1.3
DDB2-216ENST00000622878 CDK12Q9NYV4 1490 aaPredicted RBP23.14■■□□□ 1.29
DDB2-216ENST00000622878 FNBP4Q8N3X1 1017 aaPredicted RBP23.14■■□□□ 1.29
DDB2-216ENST00000622878 TNS3Q68CZ2 1445 aa23.14■■□□□ 1.29
DDB2-216ENST00000622878 SBNO1A3KN83 1393 aa23.14■■□□□ 1.29
DDB2-216ENST00000622878 PMFBP1Q8TBY8 1022 aa23.13■■□□□ 1.29
DDB2-216ENST00000622878 PSME1Q06323 249 aa23.12■■□□□ 1.29
DDB2-216ENST00000622878 QTRT2Q9H974 415 aaKnown RBP23.12■■□□□ 1.29
DDB2-216ENST00000622878 TRPM3Q9HCF6 1732 aaPredicted RBP23.11■■□□□ 1.29
DDB2-216ENST00000622878 ATP7BP35670 1465 aa23.1■■□□□ 1.29
DDB2-216ENST00000622878 RBM6P78332 1123 aaKnown RBP23.09■■□□□ 1.29
DDB2-216ENST00000622878 USP21Q9UK80 565 aa23.09■■□□□ 1.29
DDB2-216ENST00000622878 ITSN1Q15811 1721 aa23.08■■□□□ 1.28
DDB2-216ENST00000622878 TRPM1Q7Z4N2 1603 aa23.08■■□□□ 1.28
DDB2-216ENST00000622878 BCL9LQ86UU0 1499 aa23.07■■□□□ 1.28
DDB2-216ENST00000622878 NEUROD1Q13562 356 aa23.07■■□□□ 1.28
DDB2-216ENST00000622878 ABCA3Q99758 1704 aa23.07■■□□□ 1.28
DDB2-216ENST00000622878 ALS2Q96Q42 1657 aa23.06■■□□□ 1.28
DDB2-216ENST00000622878 TRIM26Q12899 539 aaPredicted RBP23.06■■□□□ 1.28
DDB2-216ENST00000622878 NUDT16Q96DE0 195 aaKnown RBP23.06■■□□□ 1.28
DDB2-216ENST00000622878 CDK19Q9BWU1 502 aa23.06■■□□□ 1.28
DDB2-216ENST00000622878 ATRNO75882 1429 aa23.06■■□□□ 1.28
DDB2-216ENST00000622878 ARHGEF10O15013 1369 aa23.05■■□□□ 1.28
DDB2-216ENST00000622878 TOPAZ1Q8N9V7 1692 aa23.05■■□□□ 1.28
DDB2-216ENST00000622878 RGS12O14924 1447 aa23.05■■□□□ 1.28
DDB2-216ENST00000622878 TRPC5Q9UL62 973 aaPredicted RBP23.04■■□□□ 1.28
DDB2-216ENST00000622878 SLIT2O94813 1529 aa23.03■■□□□ 1.28
DDB2-216ENST00000622878 CABLES1Q8TDN4 633 aa23.03■■□□□ 1.28
DDB2-216ENST00000622878 GPRASP1Q5JY77 1395 aa23.02■■□□□ 1.28
DDB2-216ENST00000622878 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.02■■□□□ 1.28
DDB2-216ENST00000622878 CENPJQ9HC77 1338 aaPredicted RBP23.02■■□□□ 1.28
DDB2-216ENST00000622878 QRICH2Q9H0J4 1663 aa23.01■■□□□ 1.27
DDB2-216ENST00000622878 NGDNQ8NEJ9 315 aaKnown RBP23■■□□□ 1.27
DDB2-216ENST00000622878 LMOD2Q6P5Q4 547 aa22.99■■□□□ 1.27
DDB2-216ENST00000622878 POLR3AO14802 1390 aaPredicted RBP22.99■■□□□ 1.27
DDB2-216ENST00000622878 CRYBG1Q9Y4K1 1723 aa22.99■■□□□ 1.27
DDB2-216ENST00000622878 CCDC61Q9Y6R9 512 aa22.98■■□□□ 1.27
DDB2-216ENST00000622878 PLEKHG3A1L390 1219 aa22.97■■□□□ 1.27
DDB2-216ENST00000622878 NBPF8Q3BBV2 869 aa22.97■■□□□ 1.27
DDB2-216ENST00000622878 UPF1Q92900 1129 aaKnown RBP eCLIP22.97■■□□□ 1.27
DDB2-216ENST00000622878 UNC5CLQ8IV45 518 aa22.96■■□□□ 1.27
DDB2-216ENST00000622878 EP400Q96L91 3159 aa22.96■■□□□ 1.27
DDB2-216ENST00000622878 PLCH1Q4KWH8 1693 aa22.96■■□□□ 1.27
DDB2-216ENST00000622878 NWD2Q9ULI1 1742 aa22.96■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 127.4 ms