RNA–Protein interactions for RNA: ENST00000622878.4

DDB2-216, Transcript of damage specific DNA binding protein 2, humanhuman

TSL 4

Gene DDB2, Length 556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB2-216ENST00000622878 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.97■□□□□ 0.317e-11■■■■■ 260.8
DDB2-216ENST00000622878 SRSF1Q07955 248 aaKnown RBP eCLIP15.21■□□□□ 0.033e-9■■■■■ 37.2
DDB2-216ENST00000622878 AQRO60306 1485 aaKnown RBP eCLIP28.65■■■□□ 2.183e-7■■■■■ 36.6
DDB2-216ENST00000622878 RBM15Q96T37 977 aaKnown RBP eCLIP16.02■□□□□ 0.165e-14■■■■■ 29.3
DDB2-216ENST00000622878 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.49■□□□□ 0.559e-21■■■■■ 29.1
DDB2-216ENST00000622878 XRCC6P12956 609 aaKnown RBP eCLIP17.83■□□□□ 0.444e-6■■■■□ 25.4
DDB2-216ENST00000622878 RBM5P52756 815 aaKnown RBP eCLIP19.91■□□□□ 0.783e-6■■■■□ 25.2
DDB2-216ENST00000622878 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.67■■□□□ 1.541e-8■■■■□ 21.3
DDB2-216ENST00000622878 SF3A3Q12874 501 aaKnown RBP eCLIP13.92□□□□□ -0.184e-9■■■□□ 16.6
DDB2-216ENST00000622878 U2AF1Q01081 240 aaKnown RBP eCLIP21.41■■□□□ 1.024e-6■■■□□ 15.6
DDB2-216ENST00000622878 KHSRPQ92945 711 aaKnown RBP eCLIP17.77■□□□□ 0.445e-10■■□□□ 14
DDB2-216ENST00000622878 PPIGQ13427 754 aaKnown RBP eCLIP18.49■□□□□ 0.555e-9■■□□□ 12.8
DDB2-216ENST00000622878 SRSF9Q13242 221 aaKnown RBP eCLIP9.9□□□□□ -0.827e-8■■□□□ 12.7
DDB2-216ENST00000622878 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.15■□□□□ 0.189e-9■■□□□ 12.1
DDB2-216ENST00000622878 U2AF2P26368 475 aaKnown RBP eCLIP17.84■□□□□ 0.453e-7■■□□□ 11.4
DDB2-216ENST00000622878 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.89■■□□□ 1.093e-7■□□□□ 10.1
DDB2-216ENST00000622878 ZNF622Q969S3 477 aaKnown RBP eCLIP20.93■□□□□ 0.942e-6■□□□□ 9.9
Retrieved 17 of 17 RNA–protein pairs in 4.6 ms