RNA–Protein interactions for RNA: ENST00000622565.4

LTBP4-239, Transcript of latent transforming growth factor beta binding protein 4, humanhuman

TSL 4

Gene LTBP4, Length 756 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4-239ENST00000622565 YTHDC2Q9H6S0 1430 aaKnown RBP28.44■■■□□ 2.14
LTBP4-239ENST00000622565 SPATA31A6Q5VVP1 1343 aa28.43■■■□□ 2.14
LTBP4-239ENST00000622565 KNDC1Q76NI1 1749 aa28.43■■■□□ 2.14
LTBP4-239ENST00000622565 CDC42BPGQ6DT37 1551 aa28.41■■■□□ 2.14
LTBP4-239ENST00000622565 LAMC1P11047 1609 aa28.4■■■□□ 2.14
LTBP4-239ENST00000622565 LRRC59Q96AG4 307 aaKnown RBP28.36■■■□□ 2.13
LTBP4-239ENST00000622565 NUTM2BA6NNL0 878 aaPredicted RBP28.34■■■□□ 2.13
LTBP4-239ENST00000622565 NUTM2EB1AL46 878 aaPredicted RBP28.34■■■□□ 2.13
LTBP4-239ENST00000622565 NUTM2AQ8IVF1 878 aaPredicted RBP28.34■■■□□ 2.13
LTBP4-239ENST00000622565 DHX57Q6P158 1386 aaKnown RBP28.34■■■□□ 2.13
LTBP4-239ENST00000622565 PNPLA6Q8IY17 1366 aa28.34■■■□□ 2.13
LTBP4-239ENST00000622565 KDM2AQ9Y2K7 1162 aa28.33■■■□□ 2.13
LTBP4-239ENST00000622565 NUTM2FA1L443 756 aa28.32■■■□□ 2.12
LTBP4-239ENST00000622565 DCAF11Q8TEB1 546 aa28.32■■■□□ 2.12
LTBP4-239ENST00000622565 SIRT1Q96EB6 747 aa28.32■■■□□ 2.12
LTBP4-239ENST00000622565 SOS2Q07890 1332 aaPredicted RBP28.32■■■□□ 2.12
LTBP4-239ENST00000622565 ADGRB1O14514 1584 aa28.32■■■□□ 2.12
LTBP4-239ENST00000622565 ESCO1Q5FWF5 840 aa28.3■■■□□ 2.12
LTBP4-239ENST00000622565 MEX3CQ5U5Q3 659 aaKnown RBP28.3■■■□□ 2.12
LTBP4-239ENST00000622565 FMN2Q9NZ56 1722 aa28.28■■■□□ 2.12
LTBP4-239ENST00000622565 PRAM1Q96QH2 718 aa28.26■■■□□ 2.11
LTBP4-239ENST00000622565 DLC1Q96QB1 1528 aa28.25■■■□□ 2.11
LTBP4-239ENST00000622565 SAFB2Q14151 953 aaKnown RBP eCLIP28.25■■■□□ 2.11
LTBP4-239ENST00000622565 PXDNQ92626 1479 aa28.24■■■□□ 2.11
LTBP4-239ENST00000622565 FOXO3O43524 673 aa28.22■■■□□ 2.11
LTBP4-239ENST00000622565 XPCQ01831 940 aaPredicted RBP28.22■■■□□ 2.11
LTBP4-239ENST00000622565 TRAK1Q9UPV9 953 aa28.21■■■□□ 2.11
LTBP4-239ENST00000622565 NPHP3Q7Z494 1330 aa28.2■■■□□ 2.11
LTBP4-239ENST00000622565 ZNF772Q68DY9 489 aaPredicted RBP28.18■■■□□ 2.1
LTBP4-239ENST00000622565 STAC3Q96MF2 364 aa28.18■■■□□ 2.1
LTBP4-239ENST00000622565 AFF2P51816 1311 aa28.18■■■□□ 2.1
LTBP4-239ENST00000622565 POGKQ9P215 609 aa28.17■■■□□ 2.1
LTBP4-239ENST00000622565 COL22A1Q8NFW1 1626 aaPredicted RBP28.17■■■□□ 2.1
LTBP4-239ENST00000622565 C8orf37Q96NL8 207 aa28.16■■■□□ 2.1
LTBP4-239ENST00000622565 ADAMTS2O95450 1211 aa28.15■■■□□ 2.1
LTBP4-239ENST00000622565 RGPD8O14715 1765 aaPredicted RBP28.14■■■□□ 2.1
LTBP4-239ENST00000622565 ADGRB2O60241 1585 aa28.14■■■□□ 2.1
LTBP4-239ENST00000622565 KIF1AQ12756 1690 aa28.13■■■□□ 2.09
LTBP4-239ENST00000622565 USP32Q8NFA0 1604 aa28.13■■■□□ 2.09
LTBP4-239ENST00000622565 HIRIP3Q9BW71 556 aaPredicted RBP28.12■■■□□ 2.09
LTBP4-239ENST00000622565 PHF8Q9UPP1 1060 aa28.1■■■□□ 2.09
LTBP4-239ENST00000622565 MINK1Q8N4C8 1332 aaPredicted RBP28.1■■■□□ 2.09
LTBP4-239ENST00000622565 ARHGEF28Q8N1W1 1705 aaKnown RBP28.07■■■□□ 2.08
LTBP4-239ENST00000622565 KRT28Q7Z3Y7 464 aa28.07■■■□□ 2.08
LTBP4-239ENST00000622565 NGLY1Q96IV0 654 aa28.06■■■□□ 2.08
LTBP4-239ENST00000622565 SPATA31A3Q5VYP0 1347 aa28.06■■■□□ 2.08
LTBP4-239ENST00000622565 ANKARQ7Z5J8 1434 aa28.06■■■□□ 2.08
LTBP4-239ENST00000622565 RXRBP28702 533 aa28.05■■■□□ 2.08
LTBP4-239ENST00000622565 PRR36Q9H6K5 1346 aa28.05■■■□□ 2.08
LTBP4-239ENST00000622565 NBPF1Q3BBV0 1214 aa28.04■■■□□ 2.08
LTBP4-239ENST00000622565 SIN3AQ96ST3 1273 aa28.04■■■□□ 2.08
LTBP4-239ENST00000622565 PMFBP1Q8TBY8 1022 aa28.03■■■□□ 2.08
LTBP4-239ENST00000622565 QTRT2Q9H974 415 aaKnown RBP28.03■■■□□ 2.08
LTBP4-239ENST00000622565 KIAA1210Q9ULL0 1709 aa28.02■■■□□ 2.08
LTBP4-239ENST00000622565 WASLO00401 505 aaPredicted RBP28.01■■■□□ 2.07
LTBP4-239ENST00000622565 TULP4Q9NRJ4 1543 aa28.01■■■□□ 2.07
LTBP4-239ENST00000622565 FNBP4Q8N3X1 1017 aaPredicted RBP27.99■■■□□ 2.07
LTBP4-239ENST00000622565 L3MBTL2Q969R5 705 aa27.99■■■□□ 2.07
LTBP4-239ENST00000622565 TNS3Q68CZ2 1445 aa27.99■■■□□ 2.07
LTBP4-239ENST00000622565 CDK12Q9NYV4 1490 aaPredicted RBP27.98■■■□□ 2.07
LTBP4-239ENST00000622565 USP21Q9UK80 565 aa27.97■■■□□ 2.07
LTBP4-239ENST00000622565 SBNO1A3KN83 1393 aa27.96■■■□□ 2.07
LTBP4-239ENST00000622565 MARF1Q9Y4F3 1742 aaKnown RBP27.95■■■□□ 2.07
LTBP4-239ENST00000622565 RGS12O14924 1447 aa27.95■■■□□ 2.07
LTBP4-239ENST00000622565 RBM6P78332 1123 aaKnown RBP27.95■■■□□ 2.06
LTBP4-239ENST00000622565 PSME1Q06323 249 aa27.95■■■□□ 2.06
LTBP4-239ENST00000622565 BCL9LQ86UU0 1499 aa27.94■■■□□ 2.06
LTBP4-239ENST00000622565 CABLES1Q8TDN4 633 aa27.93■■■□□ 2.06
LTBP4-239ENST00000622565 EIF3AQ14152 1382 aaKnown RBP27.93■■■□□ 2.06
LTBP4-239ENST00000622565 TRPM3Q9HCF6 1732 aaPredicted RBP27.92■■■□□ 2.06
LTBP4-239ENST00000622565 ATP7BP35670 1465 aa27.92■■■□□ 2.06
LTBP4-239ENST00000622565 NEUROD1Q13562 356 aa27.92■■■□□ 2.06
LTBP4-239ENST00000622565 ATRNO75882 1429 aa27.92■■■□□ 2.06
LTBP4-239ENST00000622565 PLEKHG5O94827 1062 aa27.9■■■□□ 2.06
LTBP4-239ENST00000622565 NUDT16Q96DE0 195 aaKnown RBP27.89■■■□□ 2.06
LTBP4-239ENST00000622565 CDK19Q9BWU1 502 aa27.89■■■□□ 2.06
LTBP4-239ENST00000622565 TRPC5Q9UL62 973 aaPredicted RBP27.89■■■□□ 2.06
LTBP4-239ENST00000622565 LMOD2Q6P5Q4 547 aa27.88■■■□□ 2.05
LTBP4-239ENST00000622565 ABCA3Q99758 1704 aa27.88■■■□□ 2.05
LTBP4-239ENST00000622565 UPF1Q92900 1129 aaKnown RBP eCLIP27.87■■■□□ 2.05
LTBP4-239ENST00000622565 SLIT2O94813 1529 aa27.87■■■□□ 2.05
LTBP4-239ENST00000622565 ARHGEF10O15013 1369 aa27.86■■■□□ 2.05
LTBP4-239ENST00000622565 ALS2Q96Q42 1657 aa27.85■■■□□ 2.05
LTBP4-239ENST00000622565 TRPM1Q7Z4N2 1603 aa27.85■■■□□ 2.05
LTBP4-239ENST00000622565 NGDNQ8NEJ9 315 aaKnown RBP27.84■■■□□ 2.05
LTBP4-239ENST00000622565 GPRASP1Q5JY77 1395 aa27.84■■■□□ 2.05
LTBP4-239ENST00000622565 TOPAZ1Q8N9V7 1692 aa27.83■■■□□ 2.05
LTBP4-239ENST00000622565 ITSN1Q15811 1721 aa27.82■■■□□ 2.04
LTBP4-239ENST00000622565 CENPJQ9HC77 1338 aaPredicted RBP27.81■■■□□ 2.04
LTBP4-239ENST00000622565 HAP1P54257 671 aaPredicted RBP27.8■■■□□ 2.04
LTBP4-239ENST00000622565 TNKS1BP1Q9C0C2 1729 aaKnown RBP27.79■■■□□ 2.04
LTBP4-239ENST00000622565 UNC5CLQ8IV45 518 aa27.79■■■□□ 2.04
LTBP4-239ENST00000622565 TRIM26Q12899 539 aaPredicted RBP27.78■■■□□ 2.04
LTBP4-239ENST00000622565 NBPF8Q3BBV2 869 aa27.78■■■□□ 2.04
LTBP4-239ENST00000622565 QRICH2Q9H0J4 1663 aa27.78■■■□□ 2.04
LTBP4-239ENST00000622565 GJD4Q96KN9 370 aaPredicted RBP27.77■■■□□ 2.04
LTBP4-239ENST00000622565 POLR3AO14802 1390 aaPredicted RBP27.76■■■□□ 2.03
LTBP4-239ENST00000622565 CRYBG1Q9Y4K1 1723 aa27.76■■■□□ 2.03
LTBP4-239ENST00000622565 PLCH1Q4KWH8 1693 aa27.76■■■□□ 2.03
LTBP4-239ENST00000622565 CCDC61Q9Y6R9 512 aa27.76■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms