RNA–Protein interactions for RNA: ENST00000622209.4

PMPCA-212, Transcript of peptidase, mitochondrial processing alpha subunit, humanhuman

TSL 1 (best)

Gene PMPCA, Length 1,013 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCA-212ENST00000622209 RXRBP28702 533 aa30.96■■■□□ 2.55
PMPCA-212ENST00000622209 C8orf37Q96NL8 207 aa30.96■■■□□ 2.55
PMPCA-212ENST00000622209 ESCO1Q5FWF5 840 aa30.93■■■□□ 2.54
PMPCA-212ENST00000622209 SOS2Q07890 1332 aaPredicted RBP30.93■■■□□ 2.54
PMPCA-212ENST00000622209 ADAMTS2O95450 1211 aa30.92■■■□□ 2.54
PMPCA-212ENST00000622209 LRPPRCP42704 1394 aaKnown RBP30.91■■■□□ 2.54
PMPCA-212ENST00000622209 NUTM2FA1L443 756 aa30.9■■■□□ 2.54
PMPCA-212ENST00000622209 NGLY1Q96IV0 654 aa30.87■■■□□ 2.53
PMPCA-212ENST00000622209 ABCC11Q96J66 1382 aa30.87■■■□□ 2.53
PMPCA-212ENST00000622209 QTRT2Q9H974 415 aaKnown RBP30.86■■■□□ 2.53
PMPCA-212ENST00000622209 PLEKHH1Q9ULM0 1364 aa30.86■■■□□ 2.53
PMPCA-212ENST00000622209 PIK3C2GO75747 1445 aa30.86■■■□□ 2.53
PMPCA-212ENST00000622209 TECPR2O15040 1411 aa30.84■■■□□ 2.53
PMPCA-212ENST00000622209 FOXO3O43524 673 aa30.84■■■□□ 2.53
PMPCA-212ENST00000622209 XPCQ01831 940 aaPredicted RBP30.84■■■□□ 2.53
PMPCA-212ENST00000622209 C14orf93Q9H972 538 aaKnown RBP30.83■■■□□ 2.53
PMPCA-212ENST00000622209 NPHP3Q7Z494 1330 aa30.82■■■□□ 2.52
PMPCA-212ENST00000622209 CFAP70Q5T0N1 1121 aa30.82■■■□□ 2.52
PMPCA-212ENST00000622209 UPF1Q92900 1129 aaKnown RBP eCLIP30.81■■■□□ 2.52
PMPCA-212ENST00000622209 YTHDC2Q9H6S0 1430 aaKnown RBP30.81■■■□□ 2.52
PMPCA-212ENST00000622209 LAMC1P11047 1609 aa30.8■■■□□ 2.52
PMPCA-212ENST00000622209 CDC42BPGQ6DT37 1551 aa30.79■■■□□ 2.52
PMPCA-212ENST00000622209 IFT172Q9UG01 1749 aa30.78■■■□□ 2.52
PMPCA-212ENST00000622209 RBM6P78332 1123 aaKnown RBP30.77■■■□□ 2.52
PMPCA-212ENST00000622209 SIRT1Q96EB6 747 aa30.75■■■□□ 2.51
PMPCA-212ENST00000622209 USP21Q9UK80 565 aa30.74■■■□□ 2.51
PMPCA-212ENST00000622209 DHX57Q6P158 1386 aaKnown RBP30.74■■■□□ 2.51
PMPCA-212ENST00000622209 SAFB2Q14151 953 aaKnown RBP eCLIP30.73■■■□□ 2.51
PMPCA-212ENST00000622209 CDK12Q9NYV4 1490 aaPredicted RBP30.73■■■□□ 2.51
PMPCA-212ENST00000622209 PXDNQ92626 1479 aa30.71■■■□□ 2.51
PMPCA-212ENST00000622209 NRXN1Q9ULB1 1477 aa30.7■■■□□ 2.51
PMPCA-212ENST00000622209 PRAM1Q96QH2 718 aa30.7■■■□□ 2.51
PMPCA-212ENST00000622209 FNBP4Q8N3X1 1017 aaPredicted RBP30.69■■■□□ 2.5
PMPCA-212ENST00000622209 MYOM2P54296 1465 aa30.69■■■□□ 2.5
PMPCA-212ENST00000622209 KDM2AQ9Y2K7 1162 aa30.68■■■□□ 2.5
PMPCA-212ENST00000622209 RGS12O14924 1447 aa30.67■■■□□ 2.5
PMPCA-212ENST00000622209 TRPC5Q9UL62 973 aaPredicted RBP30.67■■■□□ 2.5
PMPCA-212ENST00000622209 KRT28Q7Z3Y7 464 aa30.66■■■□□ 2.5
PMPCA-212ENST00000622209 POGKQ9P215 609 aa30.66■■■□□ 2.5
PMPCA-212ENST00000622209 KNDC1Q76NI1 1749 aa30.65■■■□□ 2.5
PMPCA-212ENST00000622209 DCAF11Q8TEB1 546 aa30.63■■■□□ 2.49
PMPCA-212ENST00000622209 PHF8Q9UPP1 1060 aa30.63■■■□□ 2.49
PMPCA-212ENST00000622209 SPATA31A3Q5VYP0 1347 aa30.62■■■□□ 2.49
PMPCA-212ENST00000622209 TRAK1Q9UPV9 953 aa30.61■■■□□ 2.49
PMPCA-212ENST00000622209 COL22A1Q8NFW1 1626 aaPredicted RBP30.61■■■□□ 2.49
PMPCA-212ENST00000622209 FMN2Q9NZ56 1722 aa30.59■■■□□ 2.49
PMPCA-212ENST00000622209 PLEKHG5O94827 1062 aa30.58■■■□□ 2.49
PMPCA-212ENST00000622209 PCGF6Q9BYE7 350 aa30.58■■■□□ 2.49
PMPCA-212ENST00000622209 PSME1Q06323 249 aa30.56■■■□□ 2.48
PMPCA-212ENST00000622209 HIRIP3Q9BW71 556 aaPredicted RBP30.56■■■□□ 2.48
PMPCA-212ENST00000622209 ATRNO75882 1429 aa30.56■■■□□ 2.48
PMPCA-212ENST00000622209 STAC3Q96MF2 364 aa30.55■■■□□ 2.48
PMPCA-212ENST00000622209 PMFBP1Q8TBY8 1022 aa30.54■■■□□ 2.48
PMPCA-212ENST00000622209 BCL9LQ86UU0 1499 aa30.54■■■□□ 2.48
PMPCA-212ENST00000622209 LMOD2Q6P5Q4 547 aa30.53■■■□□ 2.48
PMPCA-212ENST00000622209 MINK1Q8N4C8 1332 aaPredicted RBP30.52■■■□□ 2.48
PMPCA-212ENST00000622209 HAP1P54257 671 aaPredicted RBP30.52■■■□□ 2.48
PMPCA-212ENST00000622209 CABLES1Q8TDN4 633 aa30.52■■■□□ 2.48
PMPCA-212ENST00000622209 DLC1Q96QB1 1528 aa30.51■■■□□ 2.47
PMPCA-212ENST00000622209 ADGRB1O14514 1584 aa30.5■■■□□ 2.47
PMPCA-212ENST00000622209 KIF1AQ12756 1690 aa30.5■■■□□ 2.47
PMPCA-212ENST00000622209 GJD4Q96KN9 370 aaPredicted RBP30.49■■■□□ 2.47
PMPCA-212ENST00000622209 ATAD2Q6PL18 1390 aa30.47■■■□□ 2.47
PMPCA-212ENST00000622209 UNC5CLQ8IV45 518 aa30.47■■■□□ 2.47
PMPCA-212ENST00000622209 TNS3Q68CZ2 1445 aa30.47■■■□□ 2.47
PMPCA-212ENST00000622209 SBNO1A3KN83 1393 aa30.45■■■□□ 2.47
PMPCA-212ENST00000622209 SIN3AQ96ST3 1273 aa30.44■■■□□ 2.46
PMPCA-212ENST00000622209 ANKARQ7Z5J8 1434 aa30.44■■■□□ 2.46
PMPCA-212ENST00000622209 RGPD8O14715 1765 aaPredicted RBP30.42■■■□□ 2.46
PMPCA-212ENST00000622209 WASLO00401 505 aaPredicted RBP30.42■■■□□ 2.46
PMPCA-212ENST00000622209 PRR36Q9H6K5 1346 aa30.42■■■□□ 2.46
PMPCA-212ENST00000622209 SLIT2O94813 1529 aa30.4■■■□□ 2.46
PMPCA-212ENST00000622209 ARHGEF10O15013 1369 aa30.4■■■□□ 2.46
PMPCA-212ENST00000622209 NEUROD1Q13562 356 aa30.39■■■□□ 2.46
PMPCA-212ENST00000622209 ADGRB2O60241 1585 aa30.37■■■□□ 2.45
PMPCA-212ENST00000622209 USP32Q8NFA0 1604 aa30.36■■■□□ 2.45
PMPCA-212ENST00000622209 MARF1Q9Y4F3 1742 aaKnown RBP30.36■■■□□ 2.45
PMPCA-212ENST00000622209 EIF3AQ14152 1382 aaKnown RBP30.36■■■□□ 2.45
PMPCA-212ENST00000622209 GPRASP1Q5JY77 1395 aa30.36■■■□□ 2.45
PMPCA-212ENST00000622209 NGDNQ8NEJ9 315 aaKnown RBP30.35■■■□□ 2.45
PMPCA-212ENST00000622209 RALGAPBQ86X10 1494 aa30.35■■■□□ 2.45
PMPCA-212ENST00000622209 FAM83GA6ND36 823 aa30.34■■■□□ 2.45
PMPCA-212ENST00000622209 CCDC9Q9Y3X0 531 aaKnown RBP30.34■■■□□ 2.45
PMPCA-212ENST00000622209 VPS72Q15906 364 aa30.32■■■□□ 2.44
PMPCA-212ENST00000622209 L3MBTL2Q969R5 705 aa30.32■■■□□ 2.44
PMPCA-212ENST00000622209 PAK3O75914 559 aaPredicted RBP30.31■■■□□ 2.44
PMPCA-212ENST00000622209 TULP4Q9NRJ4 1543 aa30.31■■■□□ 2.44
PMPCA-212ENST00000622209 NUDT16Q96DE0 195 aaKnown RBP30.3■■■□□ 2.44
PMPCA-212ENST00000622209 SEPT12Q8IYM1 358 aa30.28■■■□□ 2.44
PMPCA-212ENST00000622209 GLI3P10071 1580 aa30.28■■■□□ 2.44
PMPCA-212ENST00000622209 CDK19Q9BWU1 502 aa30.27■■■□□ 2.44
PMPCA-212ENST00000622209 NBPF1Q3BBV0 1214 aa30.26■■■□□ 2.43
PMPCA-212ENST00000622209 CCDC125Q86Z20 511 aa30.26■■■□□ 2.43
PMPCA-212ENST00000622209 EP400Q96L91 3159 aa30.26■■■□□ 2.43
PMPCA-212ENST00000622209 TNKS1BP1Q9C0C2 1729 aaKnown RBP30.25■■■□□ 2.43
PMPCA-212ENST00000622209 BTG4Q9NY30 223 aa30.24■■■□□ 2.43
PMPCA-212ENST00000622209 CLSPNQ9HAW4 1339 aa30.22■■■□□ 2.43
PMPCA-212ENST00000622209 ONECUT3O60422 494 aaPredicted RBP30.2■■■□□ 2.43
PMPCA-212ENST00000622209 TRPM3Q9HCF6 1732 aaPredicted RBP30.19■■■□□ 2.42
PMPCA-212ENST00000622209 ATP7BP35670 1465 aa30.19■■■□□ 2.42
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms