RNA–Protein interactions for RNA: ENST00000621269.4

ATXN3-253, Transcript of ataxin 3, humanhuman

TSL 5 BASIC

Gene ATXN3, Length 936 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-253ENST00000621269 WAPLQ7Z5K2 1190 aa35.37■■■■□ 3.25
ATXN3-253ENST00000621269 C14orf93Q9H972 538 aaKnown RBP35.34■■■■□ 3.25
ATXN3-253ENST00000621269 CDC42BPGQ6DT37 1551 aa35.34■■■■□ 3.25
ATXN3-253ENST00000621269 PNPLA6Q8IY17 1366 aa35.33■■■■□ 3.25
ATXN3-253ENST00000621269 YTHDC2Q9H6S0 1430 aaKnown RBP35.32■■■■□ 3.25
ATXN3-253ENST00000621269 MYOM2P54296 1465 aa35.31■■■■□ 3.24
ATXN3-253ENST00000621269 ESCO1Q5FWF5 840 aa35.31■■■■□ 3.24
ATXN3-253ENST00000621269 SOS2Q07890 1332 aaPredicted RBP35.31■■■■□ 3.24
ATXN3-253ENST00000621269 HRCP23327 699 aa35.3■■■■□ 3.24
ATXN3-253ENST00000621269 LAMC1P11047 1609 aa35.3■■■■□ 3.24
ATXN3-253ENST00000621269 KNDC1Q76NI1 1749 aa35.29■■■■□ 3.24
ATXN3-253ENST00000621269 NRXN1Q9ULB1 1477 aa35.29■■■■□ 3.24
ATXN3-253ENST00000621269 CFAP70Q5T0N1 1121 aa35.28■■■■□ 3.24
ATXN3-253ENST00000621269 PLEKHH1Q9ULM0 1364 aa35.27■■■■□ 3.24
ATXN3-253ENST00000621269 DHX57Q6P158 1386 aaKnown RBP35.26■■■■□ 3.24
ATXN3-253ENST00000621269 SIRT1Q96EB6 747 aa35.26■■■■□ 3.24
ATXN3-253ENST00000621269 AFF2P51816 1311 aa35.24■■■■□ 3.23
ATXN3-253ENST00000621269 NPHP3Q7Z494 1330 aa35.24■■■■□ 3.23
ATXN3-253ENST00000621269 NUTM2FA1L443 756 aa35.23■■■■□ 3.23
ATXN3-253ENST00000621269 C8orf37Q96NL8 207 aa35.23■■■■□ 3.23
ATXN3-253ENST00000621269 RXRBP28702 533 aa35.2■■■■□ 3.23
ATXN3-253ENST00000621269 FOXO3O43524 673 aa35.18■■■■□ 3.22
ATXN3-253ENST00000621269 ADAMTS2O95450 1211 aa35.18■■■■□ 3.22
ATXN3-253ENST00000621269 DCAF11Q8TEB1 546 aa35.16■■■■□ 3.22
ATXN3-253ENST00000621269 KDM2AQ9Y2K7 1162 aa35.16■■■■□ 3.22
ATXN3-253ENST00000621269 NGLY1Q96IV0 654 aa35.14■■■■□ 3.22
ATXN3-253ENST00000621269 PRAM1Q96QH2 718 aa35.14■■■■□ 3.22
ATXN3-253ENST00000621269 XPCQ01831 940 aaPredicted RBP35.13■■■■□ 3.21
ATXN3-253ENST00000621269 POGKQ9P215 609 aa35.12■■■■□ 3.21
ATXN3-253ENST00000621269 FMN2Q9NZ56 1722 aa35.12■■■■□ 3.21
ATXN3-253ENST00000621269 PXDNQ92626 1479 aa35.11■■■■□ 3.21
ATXN3-253ENST00000621269 SAFB2Q14151 953 aaKnown RBP eCLIP35.11■■■■□ 3.21
ATXN3-253ENST00000621269 STAC3Q96MF2 364 aa35.11■■■■□ 3.21
ATXN3-253ENST00000621269 QTRT2Q9H974 415 aaKnown RBP35.09■■■■□ 3.21
ATXN3-253ENST00000621269 COL22A1Q8NFW1 1626 aaPredicted RBP35.07■■■■□ 3.21
ATXN3-253ENST00000621269 DLC1Q96QB1 1528 aa35.06■■■■□ 3.2
ATXN3-253ENST00000621269 TRAK1Q9UPV9 953 aa35.04■■■■□ 3.2
ATXN3-253ENST00000621269 KIF1AQ12756 1690 aa35.04■■■■□ 3.2
ATXN3-253ENST00000621269 ADGRB1O14514 1584 aa35.04■■■■□ 3.2
ATXN3-253ENST00000621269 CDK12Q9NYV4 1490 aaPredicted RBP35.03■■■■□ 3.2
ATXN3-253ENST00000621269 RBM6P78332 1123 aaKnown RBP35.03■■■■□ 3.2
ATXN3-253ENST00000621269 PHF8Q9UPP1 1060 aa35.02■■■■□ 3.2
ATXN3-253ENST00000621269 KRT28Q7Z3Y7 464 aa35.01■■■■□ 3.2
ATXN3-253ENST00000621269 USP21Q9UK80 565 aa35.01■■■■□ 3.2
ATXN3-253ENST00000621269 PSME1Q06323 249 aa34.97■■■■□ 3.19
ATXN3-253ENST00000621269 SPATA31A3Q5VYP0 1347 aa34.97■■■■□ 3.19
ATXN3-253ENST00000621269 FNBP4Q8N3X1 1017 aaPredicted RBP34.96■■■■□ 3.19
ATXN3-253ENST00000621269 TRPC5Q9UL62 973 aaPredicted RBP34.94■■■■□ 3.18
ATXN3-253ENST00000621269 HIRIP3Q9BW71 556 aaPredicted RBP34.93■■■■□ 3.18
ATXN3-253ENST00000621269 RGPD8O14715 1765 aaPredicted RBP34.92■■■■□ 3.18
ATXN3-253ENST00000621269 UPF1Q92900 1129 aaKnown RBP eCLIP34.92■■■■□ 3.18
ATXN3-253ENST00000621269 ANKARQ7Z5J8 1434 aa34.91■■■■□ 3.18
ATXN3-253ENST00000621269 MINK1Q8N4C8 1332 aaPredicted RBP34.91■■■■□ 3.18
ATXN3-253ENST00000621269 ADGRB2O60241 1585 aa34.91■■■■□ 3.18
ATXN3-253ENST00000621269 RGS12O14924 1447 aa34.89■■■■□ 3.18
ATXN3-253ENST00000621269 PMFBP1Q8TBY8 1022 aa34.88■■■■□ 3.17
ATXN3-253ENST00000621269 EIF3AQ14152 1382 aaKnown RBP34.87■■■■□ 3.17
ATXN3-253ENST00000621269 TNS3Q68CZ2 1445 aa34.86■■■■□ 3.17
ATXN3-253ENST00000621269 HAP1P54257 671 aaPredicted RBP34.85■■■■□ 3.17
ATXN3-253ENST00000621269 WASLO00401 505 aaPredicted RBP34.84■■■■□ 3.17
ATXN3-253ENST00000621269 LMOD2Q6P5Q4 547 aa34.84■■■■□ 3.17
ATXN3-253ENST00000621269 SBNO1A3KN83 1393 aa34.84■■■■□ 3.17
ATXN3-253ENST00000621269 USP32Q8NFA0 1604 aa34.84■■■■□ 3.17
ATXN3-253ENST00000621269 MARF1Q9Y4F3 1742 aaKnown RBP34.84■■■■□ 3.17
ATXN3-253ENST00000621269 ATRNO75882 1429 aa34.83■■■■□ 3.17
ATXN3-253ENST00000621269 BCL9LQ86UU0 1499 aa34.81■■■■□ 3.16
ATXN3-253ENST00000621269 ARHGEF10O15013 1369 aa34.79■■■■□ 3.16
ATXN3-253ENST00000621269 PLEKHG5O94827 1062 aa34.79■■■■□ 3.16
ATXN3-253ENST00000621269 TULP4Q9NRJ4 1543 aa34.79■■■■□ 3.16
ATXN3-253ENST00000621269 PRR36Q9H6K5 1346 aa34.78■■■■□ 3.16
ATXN3-253ENST00000621269 CABLES1Q8TDN4 633 aa34.77■■■■□ 3.16
ATXN3-253ENST00000621269 GPRASP1Q5JY77 1395 aa34.76■■■■□ 3.16
ATXN3-253ENST00000621269 ARHGEF28Q8N1W1 1705 aaKnown RBP34.75■■■■□ 3.15
ATXN3-253ENST00000621269 UNC5CLQ8IV45 518 aa34.74■■■■□ 3.15
ATXN3-253ENST00000621269 GJD4Q96KN9 370 aaPredicted RBP34.73■■■■□ 3.15
ATXN3-253ENST00000621269 NGDNQ8NEJ9 315 aaKnown RBP34.72■■■■□ 3.15
ATXN3-253ENST00000621269 KIAA1210Q9ULL0 1709 aa34.72■■■■□ 3.15
ATXN3-253ENST00000621269 SLIT2O94813 1529 aa34.71■■■■□ 3.15
ATXN3-253ENST00000621269 ATAD2Q6PL18 1390 aa34.69■■■■□ 3.14
ATXN3-253ENST00000621269 NBPF1Q3BBV0 1214 aa34.68■■■■□ 3.14
ATXN3-253ENST00000621269 NUDT16Q96DE0 195 aaKnown RBP34.68■■■■□ 3.14
ATXN3-253ENST00000621269 CDK19Q9BWU1 502 aa34.67■■■■□ 3.14
ATXN3-253ENST00000621269 TNKS1BP1Q9C0C2 1729 aaKnown RBP34.66■■■■□ 3.14
ATXN3-253ENST00000621269 TRPM3Q9HCF6 1732 aaPredicted RBP34.64■■■■□ 3.14
ATXN3-253ENST00000621269 PAK3O75914 559 aaPredicted RBP34.64■■■■□ 3.14
ATXN3-253ENST00000621269 ATP7BP35670 1465 aa34.62■■■■□ 3.13
ATXN3-253ENST00000621269 L3MBTL2Q969R5 705 aa34.61■■■■□ 3.13
ATXN3-253ENST00000621269 ABCA3Q99758 1704 aa34.61■■■■□ 3.13
ATXN3-253ENST00000621269 RALGAPBQ86X10 1494 aa34.6■■■■□ 3.13
ATXN3-253ENST00000621269 ITSN1Q15811 1721 aa34.6■■■■□ 3.13
ATXN3-253ENST00000621269 FAM83GA6ND36 823 aa34.58■■■■□ 3.13
ATXN3-253ENST00000621269 SIN3AQ96ST3 1273 aa34.58■■■■□ 3.13
ATXN3-253ENST00000621269 ALS2Q96Q42 1657 aa34.57■■■■□ 3.13
ATXN3-253ENST00000621269 VPS72Q15906 364 aa34.57■■■■□ 3.12
ATXN3-253ENST00000621269 CCDC9Q9Y3X0 531 aaKnown RBP34.57■■■■□ 3.12
ATXN3-253ENST00000621269 NEUROD1Q13562 356 aa34.56■■■■□ 3.12
ATXN3-253ENST00000621269 CCDC61Q9Y6R9 512 aa34.56■■■■□ 3.12
ATXN3-253ENST00000621269 PLCH1Q4KWH8 1693 aa34.55■■■■□ 3.12
ATXN3-253ENST00000621269 GLI3P10071 1580 aa34.55■■■■□ 3.12
ATXN3-253ENST00000621269 CENPJQ9HC77 1338 aaPredicted RBP34.55■■■■□ 3.12
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms