RNA–Protein interactions for RNA: ENST00000620882.4

LRRC39-204, Transcript of leucine rich repeat containing 39, humanhuman

TSL 5 BASIC

Gene LRRC39, Length 1,951 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC39-204ENST00000620882 PBXIP1Q96AQ6 731 aa6.63□□□□□ -1.35
LRRC39-204ENST00000620882 ZBTB3Q9H5J0 574 aa6.63□□□□□ -1.35
LRRC39-204ENST00000620882 NDUFB9Q9Y6M9 179 aa6.63□□□□□ -1.35
LRRC39-204ENST00000620882 PTPREP23469 700 aa6.62□□□□□ -1.35
LRRC39-204ENST00000620882 MFAP1P55081 439 aaKnown RBP6.62□□□□□ -1.35
LRRC39-204ENST00000620882 TMCO4Q5TGY1 634 aa6.62□□□□□ -1.35
LRRC39-204ENST00000620882 SYMPKQ92797 1274 aaKnown RBP6.62□□□□□ -1.35
LRRC39-204ENST00000620882 TSC1Q92574 1164 aa6.62□□□□□ -1.35
LRRC39-204ENST00000620882 PPP1R12CQ9BZL4 782 aa6.61□□□□□ -1.35
LRRC39-204ENST00000620882 PALM3A6NDB9 673 aaPredicted RBP6.6□□□□□ -1.35
LRRC39-204ENST00000620882 PRR7Q8TB68 274 aa6.6□□□□□ -1.35
LRRC39-204ENST00000620882 KCNK17Q96T54 332 aa6.6□□□□□ -1.35
LRRC39-204ENST00000620882 SEPT9Q9UHD8 586 aaPredicted RBP6.6□□□□□ -1.35
LRRC39-204ENST00000620882 PER1O15534 1290 aaPredicted RBP6.6□□□□□ -1.35
LRRC39-204ENST00000620882 CDCA8Q53HL2 280 aa6.6□□□□□ -1.35
LRRC39-204ENST00000620882 SWT1Q5T5J6 900 aaKnown RBP6.6□□□□□ -1.35
LRRC39-204ENST00000620882 WWC1Q8IX03 1113 aa6.6□□□□□ -1.35
LRRC39-204ENST00000620882 ALG2Q9H553 416 aa6.6□□□□□ -1.35
LRRC39-204ENST00000620882 ZSWIM6Q9HCJ5 1215 aa6.6□□□□□ -1.35
LRRC39-204ENST00000620882 KIAA1468Q9P260 1216 aa6.6□□□□□ -1.35
LRRC39-204ENST00000620882 FUT2Q10981 343 aa6.59□□□□□ -1.35
LRRC39-204ENST00000620882 MTMR2Q13614 643 aa6.59□□□□□ -1.35
LRRC39-204ENST00000620882 PACS2Q86VP3 889 aa6.59□□□□□ -1.35
LRRC39-204ENST00000620882 PSEN2P49810 448 aa6.58□□□□□ -1.36
LRRC39-204ENST00000620882 RIMBP2O15034 1052 aa6.58□□□□□ -1.36
LRRC39-204ENST00000620882 TFIP11Q9UBB9 837 aaKnown RBP6.58□□□□□ -1.36
LRRC39-204ENST00000620882 ACIN1Q9UKV3 1341 aaKnown RBP6.57□□□□□ -1.36
LRRC39-204ENST00000620882 LMOD1P29536 600 aaPredicted RBP6.57□□□□□ -1.36
LRRC39-204ENST00000620882 NR6A1Q15406 480 aa6.57□□□□□ -1.36
LRRC39-204ENST00000620882 ZBED2Q9BTP6 218 aa6.57□□□□□ -1.36
LRRC39-204ENST00000620882 PRM3Q9NNZ6 103 aa6.57□□□□□ -1.36
LRRC39-204ENST00000620882 USP46P62068 366 aa6.57□□□□□ -1.36
LRRC39-204ENST00000620882 POTEEQ6S8J3 1075 aa6.57□□□□□ -1.36
LRRC39-204ENST00000620882 TMEM88BA6NKF7 163 aa6.56□□□□□ -1.36
LRRC39-204ENST00000620882 C6orf229H3BNL8 230 aa6.56□□□□□ -1.36
LRRC39-204ENST00000620882 WASHC4Q2M389 1173 aa6.55□□□□□ -1.36
LRRC39-204ENST00000620882 TBC1D9Q6ZT07 1266 aa6.55□□□□□ -1.36
LRRC39-204ENST00000620882 HELBQ8NG08 1087 aaPredicted RBP6.55□□□□□ -1.36
LRRC39-204ENST00000620882 MAFBQ9Y5Q3 323 aaPredicted RBP6.55□□□□□ -1.36
LRRC39-204ENST00000620882 BRD1O95696 1058 aa6.54□□□□□ -1.36
LRRC39-204ENST00000620882 RBM25P49756 843 aaKnown RBP6.54□□□□□ -1.36
LRRC39-204ENST00000620882 USTQ9Y2C2 406 aa6.53□□□□□ -1.36
LRRC39-204ENST00000620882 IVNS1ABPQ9Y6Y0 642 aa6.53□□□□□ -1.36
LRRC39-204ENST00000620882 PSDA5PKW4 1024 aaPredicted RBP6.53□□□□□ -1.36
LRRC39-204ENST00000620882 PIK3CDO00329 1044 aa6.53□□□□□ -1.36
LRRC39-204ENST00000620882 CFHP08603 1231 aa6.53□□□□□ -1.36
LRRC39-204ENST00000620882 AXIN2Q9Y2T1 843 aa6.53□□□□□ -1.36
LRRC39-204ENST00000620882 CSB-PGBD3P0DP91 1061 aa6.52□□□□□ -1.37
LRRC39-204ENST00000620882 PUS10Q3MIT2 529 aaKnown RBP6.52□□□□□ -1.37
LRRC39-204ENST00000620882 DMRTA1Q5VZB9 504 aa6.52□□□□□ -1.37
LRRC39-204ENST00000620882 SAMD7Q7Z3H4 446 aa6.52□□□□□ -1.37
LRRC39-204ENST00000620882 HOXB1P14653 301 aaPredicted RBP6.51□□□□□ -1.37
LRRC39-204ENST00000620882 KCNA1Q09470 495 aa6.51□□□□□ -1.37
LRRC39-204ENST00000620882 STK32AQ8WU08 396 aa6.5□□□□□ -1.37
LRRC39-204ENST00000620882 ZMIZ1Q9ULJ6 1067 aa6.5□□□□□ -1.37
LRRC39-204ENST00000620882 RNF40O75150 1001 aa6.49□□□□□ -1.37
LRRC39-204ENST00000620882 FBXO45P0C2W1 286 aa6.49□□□□□ -1.37
LRRC39-204ENST00000620882 SLF2Q8IX21 1173 aa6.49□□□□□ -1.37
LRRC39-204ENST00000620882 RABGEF1Q9UJ41 708 aa6.49□□□□□ -1.37
LRRC39-204ENST00000620882 ATG7O95352 703 aa6.49□□□□□ -1.37
LRRC39-204ENST00000620882 KANK4Q5T7N3 995 aaPredicted RBP6.49□□□□□ -1.37
LRRC39-204ENST00000620882 VRTNQ9H8Y1 702 aa6.48□□□□□ -1.37
LRRC39-204ENST00000620882 SLC27A5Q9Y2P5 690 aa6.48□□□□□ -1.37
LRRC39-204ENST00000620882 ATP6V1AP38606 617 aa6.48□□□□□ -1.37
LRRC39-204ENST00000620882 RSPH4AQ5TD94 716 aa6.48□□□□□ -1.37
LRRC39-204ENST00000620882 TMEM164Q5U3C3 297 aa6.48□□□□□ -1.37
LRRC39-204ENST00000620882 RNF19BQ6ZMZ0 732 aa6.48□□□□□ -1.37
LRRC39-204ENST00000620882 SLAIN2Q9P270 581 aa6.48□□□□□ -1.37
LRRC39-204ENST00000620882 ATP9BO43861 1147 aa6.47□□□□□ -1.37
LRRC39-204ENST00000620882 SEMA3FQ13275 785 aa6.47□□□□□ -1.37
LRRC39-204ENST00000620882 FAM98CQ17RN3 349 aaKnown RBP6.47□□□□□ -1.37
LRRC39-204ENST00000620882 MORN1Q5T089 497 aa6.47□□□□□ -1.37
LRRC39-204ENST00000620882 PHLDB3Q6NSJ2 640 aa6.47□□□□□ -1.37
LRRC39-204ENST00000620882 BLOC1S3Q6QNY0 202 aa6.47□□□□□ -1.37
LRRC39-204ENST00000620882 IGSF3O75054 1194 aa6.46□□□□□ -1.37
LRRC39-204ENST00000620882 SND1Q7KZF4 910 aaKnown RBP eCLIP6.46□□□□□ -1.37
LRRC39-204ENST00000620882 DEPDC4Q8N2C3 294 aa6.46□□□□□ -1.37
LRRC39-204ENST00000620882 FAM174AQ8TBP5 190 aa6.46□□□□□ -1.37
LRRC39-204ENST00000620882 RETREG3Q86VR2 466 aa6.46□□□□□ -1.38
LRRC39-204ENST00000620882 MAP10Q9P2G4 905 aa6.46□□□□□ -1.38
LRRC39-204ENST00000620882 SCNN1AP37088 669 aa6.45□□□□□ -1.38
LRRC39-204ENST00000620882 CCDC27Q2M243 656 aa6.45□□□□□ -1.38
LRRC39-204ENST00000620882 PDE4CQ08493 712 aa6.44□□□□□ -1.38
LRRC39-204ENST00000620882 VARS2Q5ST30 1063 aaKnown RBP6.44□□□□□ -1.38
LRRC39-204ENST00000620882 KRTAP3-3Q9BYR6 98 aa6.44□□□□□ -1.38
LRRC39-204ENST00000620882 KRTAP3-2Q9BYR7 98 aa6.44□□□□□ -1.38
LRRC39-204ENST00000620882 VPS9D1Q9Y2B5 631 aa6.44□□□□□ -1.38
LRRC39-204ENST00000620882 LOC105371045A0A1W2PR82 267 aa6.44□□□□□ -1.38
LRRC39-204ENST00000620882 SOX11P35716 441 aa6.44□□□□□ -1.38
LRRC39-204ENST00000620882 CRTC2Q53ET0 693 aaPredicted RBP6.44□□□□□ -1.38
LRRC39-204ENST00000620882 USP17L3A6NCW0 530 aa6.43□□□□□ -1.38
LRRC39-204ENST00000620882 USP17L4A6NCW7 530 aa6.43□□□□□ -1.38
LRRC39-204ENST00000620882 ARHGAP33O14559 1287 aa6.43□□□□□ -1.38
LRRC39-204ENST00000620882 NR1H3Q13133 447 aa6.43□□□□□ -1.38
LRRC39-204ENST00000620882 USP17L2Q6R6M4 530 aa6.43□□□□□ -1.38
LRRC39-204ENST00000620882 LYPD8Q6UX82 237 aa6.43□□□□□ -1.38
LRRC39-204ENST00000620882 USP17L1Q7RTZ2 530 aa6.43□□□□□ -1.38
LRRC39-204ENST00000620882 F12P00748 615 aaPredicted RBP6.42□□□□□ -1.38
LRRC39-204ENST00000620882 GRIPAP1Q4V328 841 aa6.42□□□□□ -1.38
LRRC39-204ENST00000620882 OCSTAMPQ9BR26 566 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms