RNA–Protein interactions for RNA: ENST00000620828.4

FMR1-217, Transcript of fragile X mental retardation 1, humanhuman

TSL 1 (best)

Gene FMR1, Length 4,830 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FMR1-217ENST00000620828 NUTM2DQ5VT03 806 aaPredicted RBP8.48□□□□□ -1.05
FMR1-217ENST00000620828 TRIM52Q96A61 297 aa8.48□□□□□ -1.05
FMR1-217ENST00000620828 MON2Q7Z3U7 1717 aa8.48□□□□□ -1.05
FMR1-217ENST00000620828 ANKARQ7Z5J8 1434 aa8.48□□□□□ -1.05
FMR1-217ENST00000620828 MSH6P52701 1360 aa8.48□□□□□ -1.05
FMR1-217ENST00000620828 ATP7BP35670 1465 aa8.47□□□□□ -1.05
FMR1-217ENST00000620828 TOM1O60784 492 aa8.47□□□□□ -1.05
FMR1-217ENST00000620828 C19orf44Q9H6X5 657 aa8.47□□□□□ -1.05
FMR1-217ENST00000620828 NWD2Q9ULI1 1742 aa8.47□□□□□ -1.05
FMR1-217ENST00000620828 PLCH1Q4KWH8 1693 aa8.46□□□□□ -1.05
FMR1-217ENST00000620828 UBAP1LF5GYI3 381 aa8.46□□□□□ -1.05
FMR1-217ENST00000620828 STAG3Q9UJ98 1225 aa8.46□□□□□ -1.05
FMR1-217ENST00000620828 RALGAPBQ86X10 1494 aa8.46□□□□□ -1.05
FMR1-217ENST00000620828 BRINP3Q76B58 766 aa8.45□□□□□ -1.06
FMR1-217ENST00000620828 SLAIN2Q9P270 581 aa8.45□□□□□ -1.06
FMR1-217ENST00000620828 SOS2Q07890 1332 aaPredicted RBP8.45□□□□□ -1.06
FMR1-217ENST00000620828 MYOM1P52179 1685 aa8.45□□□□□ -1.06
FMR1-217ENST00000620828 PROSER2Q86WR7 435 aaPredicted RBP8.45□□□□□ -1.06
FMR1-217ENST00000620828 RGS17Q9UGC6 210 aaPredicted RBP8.45□□□□□ -1.06
FMR1-217ENST00000620828 WNK3Q9BYP7 1800 aa8.44□□□□□ -1.06
FMR1-217ENST00000620828 LMO7Q8WWI1 1683 aa8.44□□□□□ -1.06
FMR1-217ENST00000620828 COL18A1P39060 1754 aa8.44□□□□□ -1.06
FMR1-217ENST00000620828 PNPLA6Q8IY17 1366 aa8.43□□□□□ -1.06
FMR1-217ENST00000620828 SSH2Q76I76 1423 aa8.43□□□□□ -1.06
FMR1-217ENST00000620828 RBM33Q96EV2 1170 aaKnown RBP8.42□□□□□ -1.06
FMR1-217ENST00000620828 PIK3C2AO00443 1686 aa8.42□□□□□ -1.06
FMR1-217ENST00000620828 CFAP70Q5T0N1 1121 aa8.42□□□□□ -1.06
FMR1-217ENST00000620828 PPP1R15AO75807 674 aaPredicted RBP8.42□□□□□ -1.06
FMR1-217ENST00000620828 ZNF326Q5BKZ1 582 aaKnown RBP8.42□□□□□ -1.06
FMR1-217ENST00000620828 SBNO2Q9Y2G9 1366 aa8.41□□□□□ -1.06
FMR1-217ENST00000620828 CADPS2Q86UW7 1296 aa8.41□□□□□ -1.06
FMR1-217ENST00000620828 POLR3AO14802 1390 aaPredicted RBP8.41□□□□□ -1.06
FMR1-217ENST00000620828 CHGAP10645 457 aaKnown RBP8.41□□□□□ -1.06
FMR1-217ENST00000620828 CD163L1Q9NR16 1453 aa8.41□□□□□ -1.06
FMR1-217ENST00000620828 JCADQ9P266 1359 aa8.4□□□□□ -1.06
FMR1-217ENST00000620828 TRIM26Q12899 539 aaPredicted RBP8.4□□□□□ -1.06
FMR1-217ENST00000620828 SLIT3O75094 1523 aa8.4□□□□□ -1.06
FMR1-217ENST00000620828 CDK12Q9NYV4 1490 aaPredicted RBP8.4□□□□□ -1.06
FMR1-217ENST00000620828 PRR36Q9H6K5 1346 aa8.39□□□□□ -1.07
FMR1-217ENST00000620828 THSD7AQ9UPZ6 1657 aa8.39□□□□□ -1.07
FMR1-217ENST00000620828 COL14A1Q05707 1796 aaKnown RBP8.39□□□□□ -1.07
FMR1-217ENST00000620828 SBNO1A3KN83 1393 aa8.38□□□□□ -1.07
FMR1-217ENST00000620828 ANKRD26Q9UPS8 1709 aa8.38□□□□□ -1.07
FMR1-217ENST00000620828 TMEM132EQ6IEE7 984 aa8.38□□□□□ -1.07
FMR1-217ENST00000620828 WAPLQ7Z5K2 1190 aa8.38□□□□□ -1.07
FMR1-217ENST00000620828 SPATA31A6Q5VVP1 1343 aa8.38□□□□□ -1.07
FMR1-217ENST00000620828 SLIT2O94813 1529 aa8.38□□□□□ -1.07
FMR1-217ENST00000620828 GLI3P10071 1580 aa8.37□□□□□ -1.07
FMR1-217ENST00000620828 NBPF8Q3BBV2 869 aa8.37□□□□□ -1.07
FMR1-217ENST00000620828 ILDR2Q71H61 639 aa8.37□□□□□ -1.07
FMR1-217ENST00000620828 L3MBTL2Q969R5 705 aa8.37□□□□□ -1.07
FMR1-217ENST00000620828 BRWD3Q6RI45 1802 aa8.37□□□□□ -1.07
FMR1-217ENST00000620828 RGL3Q3MIN7 710 aa8.37□□□□□ -1.07
FMR1-217ENST00000620828 ABCC6O95255 1503 aa8.36□□□□□ -1.07
FMR1-217ENST00000620828 CLSPNQ9HAW4 1339 aa8.36□□□□□ -1.07
FMR1-217ENST00000620828 CPSF1Q10570 1443 aaKnown RBP8.36□□□□□ -1.07
FMR1-217ENST00000620828 NBPF1Q3BBV0 1214 aa8.36□□□□□ -1.07
FMR1-217ENST00000620828 TNS3Q68CZ2 1445 aa8.36□□□□□ -1.07
FMR1-217ENST00000620828 DCAF11Q8TEB1 546 aa8.36□□□□□ -1.07
FMR1-217ENST00000620828 SIN3AQ96ST3 1273 aa8.35□□□□□ -1.07
FMR1-217ENST00000620828 BCL9LQ86UU0 1499 aa8.35□□□□□ -1.07
FMR1-217ENST00000620828 ATRNO75882 1429 aa8.35□□□□□ -1.07
FMR1-217ENST00000620828 PIP4K2BP78356 416 aa8.35□□□□□ -1.07
FMR1-217ENST00000620828 ORAI2Q96SN7 254 aa8.35□□□□□ -1.07
FMR1-217ENST00000620828 NFAT5O94916 1531 aa8.34□□□□□ -1.07
FMR1-217ENST00000620828 CAMTA1Q9Y6Y1 1673 aa8.34□□□□□ -1.07
FMR1-217ENST00000620828 PEAK1Q9H792 1746 aa8.34□□□□□ -1.07
FMR1-217ENST00000620828 PRAM1Q96QH2 718 aa8.33□□□□□ -1.08
FMR1-217ENST00000620828 EIF3AQ14152 1382 aaKnown RBP8.33□□□□□ -1.08
FMR1-217ENST00000620828 SPATA31A3Q5VYP0 1347 aa8.33□□□□□ -1.08
FMR1-217ENST00000620828 RGPD5Q99666 1765 aa8.33□□□□□ -1.08
FMR1-217ENST00000620828 ATF3P18847 181 aa8.33□□□□□ -1.08
FMR1-217ENST00000620828 BRD4O60885 1362 aaPredicted RBP8.33□□□□□ -1.08
FMR1-217ENST00000620828 KIF20BQ96Q89 1820 aa8.32□□□□□ -1.08
FMR1-217ENST00000620828 PARP4Q9UKK3 1724 aaKnown RBP8.32□□□□□ -1.08
FMR1-217ENST00000620828 WASLO00401 505 aaPredicted RBP8.32□□□□□ -1.08
FMR1-217ENST00000620828 PLEKHG3A1L390 1219 aa8.32□□□□□ -1.08
FMR1-217ENST00000620828 LTN1O94822 1766 aa8.31□□□□□ -1.08
FMR1-217ENST00000620828 DDX17Q92841 729 aaKnown RBP8.31□□□□□ -1.08
FMR1-217ENST00000620828 TNS1Q9HBL0 1735 aaKnown RBP8.31□□□□□ -1.08
FMR1-217ENST00000620828 SENP3Q9H4L4 574 aaPredicted RBP8.31□□□□□ -1.08
FMR1-217ENST00000620828 SHANK3Q9BYB0 1731 aa8.3□□□□□ -1.08
FMR1-217ENST00000620828 PUS7Q96PZ0 661 aaKnown RBP8.3□□□□□ -1.08
FMR1-217ENST00000620828 TESK2Q96S53 571 aa8.3□□□□□ -1.08
FMR1-217ENST00000620828 USP19O94966 1318 aa8.3□□□□□ -1.08
FMR1-217ENST00000620828 FNBP4Q8N3X1 1017 aaPredicted RBP8.3□□□□□ -1.08
FMR1-217ENST00000620828 TIMELESSQ9UNS1 1208 aa8.29□□□□□ -1.08
FMR1-217ENST00000620828 RGPD3A6NKT7 1758 aaPredicted RBP8.29□□□□□ -1.08
FMR1-217ENST00000620828 RGPD4Q7Z3J3 1758 aa8.29□□□□□ -1.08
FMR1-217ENST00000620828 FAM208AQ9UK61 1670 aaKnown RBP8.29□□□□□ -1.08
FMR1-217ENST00000620828 USP6P35125 1406 aa8.29□□□□□ -1.08
FMR1-217ENST00000620828 NPHP3Q7Z494 1330 aa8.28□□□□□ -1.08
FMR1-217ENST00000620828 POTEAQ6S8J7 498 aa8.28□□□□□ -1.08
FMR1-217ENST00000620828 LRRC59Q96AG4 307 aaKnown RBP8.28□□□□□ -1.08
FMR1-217ENST00000620828 BCANQ96GW7 911 aa8.28□□□□□ -1.08
FMR1-217ENST00000620828 RGS12O14924 1447 aa8.28□□□□□ -1.08
FMR1-217ENST00000620828 SBF2Q86WG5 1849 aa8.28□□□□□ -1.08
FMR1-217ENST00000620828 STK26Q9P289 416 aa8.27□□□□□ -1.08
FMR1-217ENST00000620828 TRAK1Q9UPV9 953 aa8.27□□□□□ -1.09
FMR1-217ENST00000620828 DISP3Q9P2K9 1392 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms