RNA–Protein interactions for RNA: ENST00000619601.1

GAPDH-211, Transcript of glyceraldehyde-3-phosphate dehydrogenase, humanhuman

TSL 5 BASIC

Gene GAPDH, Length 1,086 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Exosome, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDH-211ENST00000619601 LRRC59Q96AG4 307 aaKnown RBP16.05■□□□□ 0.16
GAPDH-211ENST00000619601 C14orf93Q9H972 538 aaKnown RBP16.05■□□□□ 0.16
GAPDH-211ENST00000619601 KNDC1Q76NI1 1749 aa16.05■□□□□ 0.16
GAPDH-211ENST00000619601 STK26Q9P289 416 aa16.03■□□□□ 0.16
GAPDH-211ENST00000619601 C1orf167Q5SNV9 1468 aa16.03■□□□□ 0.16
GAPDH-211ENST00000619601 YTHDC2Q9H6S0 1430 aaKnown RBP16.02■□□□□ 0.16
GAPDH-211ENST00000619601 DHX57Q6P158 1386 aaKnown RBP16.02■□□□□ 0.16
GAPDH-211ENST00000619601 AFF2P51816 1311 aa16.02■□□□□ 0.16
GAPDH-211ENST00000619601 CDC42BPGQ6DT37 1551 aa16.02■□□□□ 0.16
GAPDH-211ENST00000619601 RXRBP28702 533 aa16.02■□□□□ 0.16
GAPDH-211ENST00000619601 TMEM132EQ6IEE7 984 aa16.02■□□□□ 0.16
GAPDH-211ENST00000619601 SIRT1Q96EB6 747 aa16.02■□□□□ 0.16
GAPDH-211ENST00000619601 PNPLA6Q8IY17 1366 aa16.01■□□□□ 0.15
GAPDH-211ENST00000619601 CFAP70Q5T0N1 1121 aa16■□□□□ 0.15
GAPDH-211ENST00000619601 UPF1Q92900 1129 aaKnown RBP eCLIP16■□□□□ 0.15
GAPDH-211ENST00000619601 DCAF11Q8TEB1 546 aa15.99■□□□□ 0.15
GAPDH-211ENST00000619601 CDK12Q9NYV4 1490 aaPredicted RBP15.98■□□□□ 0.15
GAPDH-211ENST00000619601 WAPLQ7Z5K2 1190 aa15.98■□□□□ 0.15
GAPDH-211ENST00000619601 C8orf37Q96NL8 207 aa15.98■□□□□ 0.15
GAPDH-211ENST00000619601 ORAI2Q96SN7 254 aa15.98■□□□□ 0.15
GAPDH-211ENST00000619601 SOS2Q07890 1332 aaPredicted RBP15.96■□□□□ 0.15
GAPDH-211ENST00000619601 KDM2AQ9Y2K7 1162 aa15.96■□□□□ 0.15
GAPDH-211ENST00000619601 DLC1Q96QB1 1528 aa15.95■□□□□ 0.14
GAPDH-211ENST00000619601 QTRT2Q9H974 415 aaKnown RBP15.95■□□□□ 0.14
GAPDH-211ENST00000619601 ADAMTS2O95450 1211 aa15.94■□□□□ 0.14
GAPDH-211ENST00000619601 ADGRB1O14514 1584 aa15.93■□□□□ 0.14
GAPDH-211ENST00000619601 PLEKHH1Q9ULM0 1364 aa15.93■□□□□ 0.14
GAPDH-211ENST00000619601 ESCO1Q5FWF5 840 aa15.93■□□□□ 0.14
GAPDH-211ENST00000619601 NGLY1Q96IV0 654 aa15.93■□□□□ 0.14
GAPDH-211ENST00000619601 FMN2Q9NZ56 1722 aa15.92■□□□□ 0.14
GAPDH-211ENST00000619601 RBM6P78332 1123 aaKnown RBP15.92■□□□□ 0.14
GAPDH-211ENST00000619601 POGKQ9P215 609 aa15.92■□□□□ 0.14
GAPDH-211ENST00000619601 RGS12O14924 1447 aa15.92■□□□□ 0.14
GAPDH-211ENST00000619601 NPHP3Q7Z494 1330 aa15.92■□□□□ 0.14
GAPDH-211ENST00000619601 COL22A1Q8NFW1 1626 aaPredicted RBP15.91■□□□□ 0.14
GAPDH-211ENST00000619601 PRAM1Q96QH2 718 aa15.91■□□□□ 0.14
GAPDH-211ENST00000619601 KIF1AQ12756 1690 aa15.89■□□□□ 0.13
GAPDH-211ENST00000619601 KIAA1210Q9ULL0 1709 aa15.88■□□□□ 0.13
GAPDH-211ENST00000619601 TRAK1Q9UPV9 953 aa15.88■□□□□ 0.13
GAPDH-211ENST00000619601 MARF1Q9Y4F3 1742 aaKnown RBP15.88■□□□□ 0.13
GAPDH-211ENST00000619601 EIF3AQ14152 1382 aaKnown RBP15.87■□□□□ 0.13
GAPDH-211ENST00000619601 ADGRB2O60241 1585 aa15.87■□□□□ 0.13
GAPDH-211ENST00000619601 PXDNQ92626 1479 aa15.87■□□□□ 0.13
GAPDH-211ENST00000619601 NUTM2FA1L443 756 aa15.87■□□□□ 0.13
GAPDH-211ENST00000619601 USP21Q9UK80 565 aa15.87■□□□□ 0.13
GAPDH-211ENST00000619601 FOXO3O43524 673 aa15.86■□□□□ 0.13
GAPDH-211ENST00000619601 SAFB2Q14151 953 aaKnown RBP eCLIP15.86■□□□□ 0.13
GAPDH-211ENST00000619601 FNBP4Q8N3X1 1017 aaPredicted RBP15.86■□□□□ 0.13
GAPDH-211ENST00000619601 ANKARQ7Z5J8 1434 aa15.85■□□□□ 0.13
GAPDH-211ENST00000619601 XPCQ01831 940 aaPredicted RBP15.85■□□□□ 0.13
GAPDH-211ENST00000619601 TRPC5Q9UL62 973 aaPredicted RBP15.84■□□□□ 0.13
GAPDH-211ENST00000619601 RGPD8O14715 1765 aaPredicted RBP15.83■□□□□ 0.12
GAPDH-211ENST00000619601 TRIM26Q12899 539 aaPredicted RBP15.83■□□□□ 0.12
GAPDH-211ENST00000619601 PHF8Q9UPP1 1060 aa15.83■□□□□ 0.12
GAPDH-211ENST00000619601 ATRNO75882 1429 aa15.83■□□□□ 0.12
GAPDH-211ENST00000619601 ARHGEF28Q8N1W1 1705 aaKnown RBP15.82■□□□□ 0.12
GAPDH-211ENST00000619601 PSME1Q06323 249 aa15.81■□□□□ 0.12
GAPDH-211ENST00000619601 MINK1Q8N4C8 1332 aaPredicted RBP15.81■□□□□ 0.12
GAPDH-211ENST00000619601 BCL9LQ86UU0 1499 aa15.8■□□□□ 0.12
GAPDH-211ENST00000619601 WASLO00401 505 aaPredicted RBP15.8■□□□□ 0.12
GAPDH-211ENST00000619601 KRT28Q7Z3Y7 464 aa15.8■□□□□ 0.12
GAPDH-211ENST00000619601 TULP4Q9NRJ4 1543 aa15.79■□□□□ 0.12
GAPDH-211ENST00000619601 ATAD2Q6PL18 1390 aa15.79■□□□□ 0.12
GAPDH-211ENST00000619601 L3MBTL2Q969R5 705 aa15.79■□□□□ 0.12
GAPDH-211ENST00000619601 HIRIP3Q9BW71 556 aaPredicted RBP15.79■□□□□ 0.12
GAPDH-211ENST00000619601 SPATA31A3Q5VYP0 1347 aa15.78■□□□□ 0.12
GAPDH-211ENST00000619601 USP32Q8NFA0 1604 aa15.78■□□□□ 0.12
GAPDH-211ENST00000619601 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.77■□□□□ 0.12
GAPDH-211ENST00000619601 SBNO1A3KN83 1393 aa15.77■□□□□ 0.12
GAPDH-211ENST00000619601 NEUROD1Q13562 356 aa15.77■□□□□ 0.12
GAPDH-211ENST00000619601 SIN3AQ96ST3 1273 aa15.77■□□□□ 0.12
GAPDH-211ENST00000619601 EP400Q96L91 3159 aa15.77■□□□□ 0.12
GAPDH-211ENST00000619601 TNS3Q68CZ2 1445 aa15.76■□□□□ 0.11
GAPDH-211ENST00000619601 GPRASP1Q5JY77 1395 aa15.75■□□□□ 0.11
GAPDH-211ENST00000619601 ITSN1Q15811 1721 aa15.75■□□□□ 0.11
GAPDH-211ENST00000619601 NBPF1Q3BBV0 1214 aa15.75■□□□□ 0.11
GAPDH-211ENST00000619601 ARHGEF10O15013 1369 aa15.75■□□□□ 0.11
GAPDH-211ENST00000619601 PMFBP1Q8TBY8 1022 aa15.74■□□□□ 0.11
GAPDH-211ENST00000619601 GJD4Q96KN9 370 aaPredicted RBP15.74■□□□□ 0.11
GAPDH-211ENST00000619601 SLIT2O94813 1529 aa15.73■□□□□ 0.11
GAPDH-211ENST00000619601 PRR36Q9H6K5 1346 aa15.73■□□□□ 0.11
GAPDH-211ENST00000619601 GLI3P10071 1580 aa15.73■□□□□ 0.11
GAPDH-211ENST00000619601 CENPJQ9HC77 1338 aaPredicted RBP15.72■□□□□ 0.11
GAPDH-211ENST00000619601 UNC5CLQ8IV45 518 aa15.72■□□□□ 0.11
GAPDH-211ENST00000619601 NUDT16Q96DE0 195 aaKnown RBP15.72■□□□□ 0.11
GAPDH-211ENST00000619601 CDK19Q9BWU1 502 aa15.72■□□□□ 0.11
GAPDH-211ENST00000619601 TRPM1Q7Z4N2 1603 aa15.72■□□□□ 0.11
GAPDH-211ENST00000619601 ATP7BP35670 1465 aa15.71■□□□□ 0.11
GAPDH-211ENST00000619601 ABCA3Q99758 1704 aa15.71■□□□□ 0.11
GAPDH-211ENST00000619601 BRWD3Q6RI45 1802 aa15.71■□□□□ 0.11
GAPDH-211ENST00000619601 HAP1P54257 671 aaPredicted RBP15.71■□□□□ 0.11
GAPDH-211ENST00000619601 NGDNQ8NEJ9 315 aaKnown RBP15.71■□□□□ 0.11
GAPDH-211ENST00000619601 RALGAPBQ86X10 1494 aa15.71■□□□□ 0.1
GAPDH-211ENST00000619601 LMOD2Q6P5Q4 547 aa15.7■□□□□ 0.1
GAPDH-211ENST00000619601 CABLES1Q8TDN4 633 aa15.7■□□□□ 0.1
GAPDH-211ENST00000619601 ROCK2O75116 1388 aaKnown RBP15.7■□□□□ 0.1
GAPDH-211ENST00000619601 PLCH1Q4KWH8 1693 aa15.7■□□□□ 0.1
GAPDH-211ENST00000619601 PLEKHG5O94827 1062 aa15.69■□□□□ 0.1
GAPDH-211ENST00000619601 CCDC61Q9Y6R9 512 aa15.69■□□□□ 0.1
GAPDH-211ENST00000619601 TRPM3Q9HCF6 1732 aaPredicted RBP15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms