RNA–Protein interactions for RNA: ENST00000618148.1

VPS45-213, Transcript of vacuolar protein sorting 45 homolog, humanhuman

TSL 2

Gene VPS45, Length 1,670 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45-213ENST00000618148 USP47Q96K76 1375 aa10.6□□□□□ -0.71
VPS45-213ENST00000618148 MKRN4PQ13434 485 aaPredicted RBP10.6□□□□□ -0.71
VPS45-213ENST00000618148 NUTM2DQ5VT03 806 aaPredicted RBP10.6□□□□□ -0.71
VPS45-213ENST00000618148 CHADLQ6NUI6 762 aa10.6□□□□□ -0.71
VPS45-213ENST00000618148 POLR1AO95602 1720 aaPredicted RBP10.59□□□□□ -0.71
VPS45-213ENST00000618148 CARD11Q9BXL7 1154 aa10.59□□□□□ -0.71
VPS45-213ENST00000618148 TECPR2O15040 1411 aa10.58□□□□□ -0.72
VPS45-213ENST00000618148 EIF4G2P78344 907 aaKnown RBP eCLIP10.58□□□□□ -0.72
VPS45-213ENST00000618148 ANKLE2Q86XL3 938 aa10.58□□□□□ -0.72
VPS45-213ENST00000618148 PRR29P0C7W0 189 aa10.57□□□□□ -0.72
VPS45-213ENST00000618148 TBX22Q9Y458 520 aa10.57□□□□□ -0.72
VPS45-213ENST00000618148 DLC1Q96QB1 1528 aa10.57□□□□□ -0.72
VPS45-213ENST00000618148 PIK3R4Q99570 1358 aa10.57□□□□□ -0.72
VPS45-213ENST00000618148 NPHP4O75161 1426 aaPredicted RBP10.56□□□□□ -0.72
VPS45-213ENST00000618148 YTHDC2Q9H6S0 1430 aaKnown RBP10.56□□□□□ -0.72
VPS45-213ENST00000618148 KNDC1Q76NI1 1749 aa10.56□□□□□ -0.72
VPS45-213ENST00000618148 METP08581 1390 aa10.56□□□□□ -0.72
VPS45-213ENST00000618148 LRPPRCP42704 1394 aaKnown RBP10.56□□□□□ -0.72
VPS45-213ENST00000618148 ABCC11Q96J66 1382 aa10.56□□□□□ -0.72
VPS45-213ENST00000618148 SBNO2Q9Y2G9 1366 aa10.56□□□□□ -0.72
VPS45-213ENST00000618148 HSPA5P11021 654 aaKnown RBP10.56□□□□□ -0.72
VPS45-213ENST00000618148 ARHGEF28Q8N1W1 1705 aaKnown RBP10.55□□□□□ -0.72
VPS45-213ENST00000618148 EIF3AQ14152 1382 aaKnown RBP10.55□□□□□ -0.72
VPS45-213ENST00000618148 CLCN6P51797 869 aa10.55□□□□□ -0.72
VPS45-213ENST00000618148 CPS1P31327 1500 aa10.55□□□□□ -0.72
VPS45-213ENST00000618148 XRN1Q8IZH2 1706 aaKnown RBP10.54□□□□□ -0.72
VPS45-213ENST00000618148 STRCQ7RTU9 1775 aa10.54□□□□□ -0.72
VPS45-213ENST00000618148 ZNF316A6NFI3 1004 aaPredicted RBP10.53□□□□□ -0.72
VPS45-213ENST00000618148 TMEM132EQ6IEE7 984 aa10.53□□□□□ -0.72
VPS45-213ENST00000618148 TESK2Q96S53 571 aa10.53□□□□□ -0.72
VPS45-213ENST00000618148 PTCH1Q13635 1447 aa10.53□□□□□ -0.72
VPS45-213ENST00000618148 FAM135BQ49AJ0 1406 aa10.53□□□□□ -0.72
VPS45-213ENST00000618148 SIRT1Q96EB6 747 aa10.53□□□□□ -0.72
VPS45-213ENST00000618148 PTPRUQ92729 1446 aa10.52□□□□□ -0.72
VPS45-213ENST00000618148 ST20-MTHFSA0A0A6YYL1 179 aa10.52□□□□□ -0.73
VPS45-213ENST00000618148 NWD1Q149M9 1564 aa10.52□□□□□ -0.73
VPS45-213ENST00000618148 POTEIP0CG38 1075 aa10.51□□□□□ -0.73
VPS45-213ENST00000618148 HSPA2P54652 639 aa10.51□□□□□ -0.73
VPS45-213ENST00000618148 SLC26A8Q96RN1 970 aa10.51□□□□□ -0.73
VPS45-213ENST00000618148 NCKAP5LQ9HCH0 1330 aa10.51□□□□□ -0.73
VPS45-213ENST00000618148 CHD2O14647 1828 aaKnown RBP10.5□□□□□ -0.73
VPS45-213ENST00000618148 SLC24A1O60721 1099 aa10.5□□□□□ -0.73
VPS45-213ENST00000618148 CD44P16070 742 aaKnown RBP10.5□□□□□ -0.73
VPS45-213ENST00000618148 CENPJQ9HC77 1338 aaPredicted RBP10.5□□□□□ -0.73
VPS45-213ENST00000618148 QRICH2Q9H0J4 1663 aa10.49□□□□□ -0.73
VPS45-213ENST00000618148 TRAK1Q9UPV9 953 aa10.49□□□□□ -0.73
VPS45-213ENST00000618148 BCANQ96GW7 911 aa10.48□□□□□ -0.73
VPS45-213ENST00000618148 ROBO2Q9HCK4 1378 aa10.48□□□□□ -0.73
VPS45-213ENST00000618148 NKTRP30414 1462 aaKnown RBP10.48□□□□□ -0.73
VPS45-213ENST00000618148 CCDC7Q96M83 1385 aa10.47□□□□□ -0.73
VPS45-213ENST00000618148 WASHC2AQ641Q2 1341 aa10.47□□□□□ -0.73
VPS45-213ENST00000618148 HIRIP3Q9BW71 556 aaPredicted RBP10.47□□□□□ -0.73
VPS45-213ENST00000618148 PLSCR2Q9NRY7 297 aa10.47□□□□□ -0.73
VPS45-213ENST00000618148 ADGRB2O60241 1585 aa10.47□□□□□ -0.73
VPS45-213ENST00000618148 C11orf95C9JLR9 678 aaPredicted RBP10.47□□□□□ -0.73
VPS45-213ENST00000618148 TULP4Q9NRJ4 1543 aa10.46□□□□□ -0.73
VPS45-213ENST00000618148 DISP3Q9P2K9 1392 aa10.46□□□□□ -0.73
VPS45-213ENST00000618148 KIF7Q2M1P5 1343 aa10.46□□□□□ -0.74
VPS45-213ENST00000618148 PRAM1Q96QH2 718 aa10.46□□□□□ -0.74
VPS45-213ENST00000618148 STK26Q9P289 416 aa10.46□□□□□ -0.74
VPS45-213ENST00000618148 AMOTL2Q9Y2J4 779 aa10.46□□□□□ -0.74
VPS45-213ENST00000618148 PLEKHH1Q9ULM0 1364 aa10.45□□□□□ -0.74
VPS45-213ENST00000618148 KCNA6P17658 529 aa10.45□□□□□ -0.74
VPS45-213ENST00000618148 PUS7Q96PZ0 661 aaKnown RBP10.45□□□□□ -0.74
VPS45-213ENST00000618148 TMF1P82094 1093 aa10.44□□□□□ -0.74
VPS45-213ENST00000618148 FARP1Q9Y4F1 1045 aaPredicted RBP10.44□□□□□ -0.74
VPS45-213ENST00000618148 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.44□□□□□ -0.74
VPS45-213ENST00000618148 CDCA8Q53HL2 280 aa10.43□□□□□ -0.74
VPS45-213ENST00000618148 WAPLQ7Z5K2 1190 aa10.43□□□□□ -0.74
VPS45-213ENST00000618148 STRCP1A6NGW2 1772 aa10.43□□□□□ -0.74
VPS45-213ENST00000618148 POGKQ9P215 609 aa10.42□□□□□ -0.74
VPS45-213ENST00000618148 NCOA3Q9Y6Q9 1424 aa10.42□□□□□ -0.74
VPS45-213ENST00000618148 CDC42BPGQ6DT37 1551 aa10.41□□□□□ -0.74
VPS45-213ENST00000618148 DCBLD2Q96PD2 775 aa10.41□□□□□ -0.74
VPS45-213ENST00000618148 EVC2Q86UK5 1308 aa10.41□□□□□ -0.74
VPS45-213ENST00000618148 ADGRL3Q9HAR2 1447 aa10.41□□□□□ -0.74
VPS45-213ENST00000618148 MYOM1P52179 1685 aa10.41□□□□□ -0.74
VPS45-213ENST00000618148 NALCNQ8IZF0 1738 aa10.4□□□□□ -0.75
VPS45-213ENST00000618148 MINK1Q8N4C8 1332 aaPredicted RBP10.39□□□□□ -0.75
VPS45-213ENST00000618148 NINLQ9Y2I6 1382 aa10.39□□□□□ -0.75
VPS45-213ENST00000618148 ATP7BP35670 1465 aa10.38□□□□□ -0.75
VPS45-213ENST00000618148 ATAD2Q6PL18 1390 aa10.38□□□□□ -0.75
VPS45-213ENST00000618148 WASLO00401 505 aaPredicted RBP10.38□□□□□ -0.75
VPS45-213ENST00000618148 SAFB2Q14151 953 aaKnown RBP eCLIP10.38□□□□□ -0.75
VPS45-213ENST00000618148 DCCP43146 1447 aa10.38□□□□□ -0.75
VPS45-213ENST00000618148 LRRC7Q96NW7 1537 aa10.37□□□□□ -0.75
VPS45-213ENST00000618148 TOPAZ1Q8N9V7 1692 aa10.37□□□□□ -0.75
VPS45-213ENST00000618148 ANKARQ7Z5J8 1434 aa10.37□□□□□ -0.75
VPS45-213ENST00000618148 FMN2Q9NZ56 1722 aa10.36□□□□□ -0.75
VPS45-213ENST00000618148 TMEM94Q12767 1356 aa10.36□□□□□ -0.75
VPS45-213ENST00000618148 CDK19Q9BWU1 502 aa10.36□□□□□ -0.75
VPS45-213ENST00000618148 ZNF335Q9H4Z2 1342 aaPredicted RBP10.36□□□□□ -0.75
VPS45-213ENST00000618148 LTBP4Q8N2S1 1624 aa10.36□□□□□ -0.75
VPS45-213ENST00000618148 USP32Q8NFA0 1604 aa10.36□□□□□ -0.75
VPS45-213ENST00000618148 XIRP1Q702N8 1843 aaKnown RBP10.35□□□□□ -0.75
VPS45-213ENST00000618148 DDX10Q13206 875 aaKnown RBP10.35□□□□□ -0.75
VPS45-213ENST00000618148 PROSER2Q86WR7 435 aaPredicted RBP10.34□□□□□ -0.75
VPS45-213ENST00000618148 PRR36Q9H6K5 1346 aa10.34□□□□□ -0.75
VPS45-213ENST00000618148 SRPK2P78362 688 aaKnown RBP10.34□□□□□ -0.75
VPS45-213ENST00000618148 CABP2Q9NPB3 220 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms