RNA–Protein interactions for RNA: ENST00000617539.1

NEDD4L-237, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 2 BASIC

Gene NEDD4L, Length 728 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-237ENST00000617539 YTHDC2Q9H6S0 1430 aaKnown RBP32.85■■■□□ 2.85
NEDD4L-237ENST00000617539 PLEKHH1Q9ULM0 1364 aa32.84■■■□□ 2.85
NEDD4L-237ENST00000617539 PNPLA6Q8IY17 1366 aa32.83■■■□□ 2.85
NEDD4L-237ENST00000617539 LRRC59Q96AG4 307 aaKnown RBP32.83■■■□□ 2.85
NEDD4L-237ENST00000617539 MEX3CQ5U5Q3 659 aaKnown RBP32.82■■■□□ 2.84
NEDD4L-237ENST00000617539 C14orf93Q9H972 538 aaKnown RBP32.82■■■□□ 2.84
NEDD4L-237ENST00000617539 NUTM2BA6NNL0 878 aaPredicted RBP32.8■■■□□ 2.84
NEDD4L-237ENST00000617539 NUTM2EB1AL46 878 aaPredicted RBP32.8■■■□□ 2.84
NEDD4L-237ENST00000617539 NUTM2AQ8IVF1 878 aaPredicted RBP32.8■■■□□ 2.84
NEDD4L-237ENST00000617539 SOS2Q07890 1332 aaPredicted RBP32.78■■■□□ 2.84
NEDD4L-237ENST00000617539 FMN2Q9NZ56 1722 aa32.78■■■□□ 2.84
NEDD4L-237ENST00000617539 HRCP23327 699 aa32.78■■■□□ 2.84
NEDD4L-237ENST00000617539 CFAP70Q5T0N1 1121 aa32.78■■■□□ 2.84
NEDD4L-237ENST00000617539 PXDNQ92626 1479 aa32.72■■■□□ 2.83
NEDD4L-237ENST00000617539 ADGRB1O14514 1584 aa32.71■■■□□ 2.83
NEDD4L-237ENST00000617539 ZNF772Q68DY9 489 aaPredicted RBP32.71■■■□□ 2.83
NEDD4L-237ENST00000617539 COL22A1Q8NFW1 1626 aaPredicted RBP32.7■■■□□ 2.83
NEDD4L-237ENST00000617539 ESCO1Q5FWF5 840 aa32.7■■■□□ 2.83
NEDD4L-237ENST00000617539 SIRT1Q96EB6 747 aa32.7■■■□□ 2.83
NEDD4L-237ENST00000617539 DHX57Q6P158 1386 aaKnown RBP32.7■■■□□ 2.82
NEDD4L-237ENST00000617539 NUTM2FA1L443 756 aa32.68■■■□□ 2.82
NEDD4L-237ENST00000617539 RGPD8O14715 1765 aaPredicted RBP32.67■■■□□ 2.82
NEDD4L-237ENST00000617539 AFF2P51816 1311 aa32.66■■■□□ 2.82
NEDD4L-237ENST00000617539 DLC1Q96QB1 1528 aa32.66■■■□□ 2.82
NEDD4L-237ENST00000617539 NPHP3Q7Z494 1330 aa32.65■■■□□ 2.82
NEDD4L-237ENST00000617539 KIF1AQ12756 1690 aa32.63■■■□□ 2.81
NEDD4L-237ENST00000617539 FOXO3O43524 673 aa32.62■■■□□ 2.81
NEDD4L-237ENST00000617539 C8orf37Q96NL8 207 aa32.62■■■□□ 2.81
NEDD4L-237ENST00000617539 DCAF11Q8TEB1 546 aa32.61■■■□□ 2.81
NEDD4L-237ENST00000617539 PRAM1Q96QH2 718 aa32.61■■■□□ 2.81
NEDD4L-237ENST00000617539 XPCQ01831 940 aaPredicted RBP32.6■■■□□ 2.81
NEDD4L-237ENST00000617539 KDM2AQ9Y2K7 1162 aa32.6■■■□□ 2.81
NEDD4L-237ENST00000617539 ADGRB2O60241 1585 aa32.58■■■□□ 2.81
NEDD4L-237ENST00000617539 ADAMTS2O95450 1211 aa32.58■■■□□ 2.81
NEDD4L-237ENST00000617539 SAFB2Q14151 953 aaKnown RBP eCLIP32.57■■■□□ 2.8
NEDD4L-237ENST00000617539 USP32Q8NFA0 1604 aa32.57■■■□□ 2.8
NEDD4L-237ENST00000617539 MARF1Q9Y4F3 1742 aaKnown RBP32.54■■■□□ 2.8
NEDD4L-237ENST00000617539 RXRBP28702 533 aa32.54■■■□□ 2.8
NEDD4L-237ENST00000617539 CDK12Q9NYV4 1490 aaPredicted RBP32.54■■■□□ 2.8
NEDD4L-237ENST00000617539 TRAK1Q9UPV9 953 aa32.51■■■□□ 2.79
NEDD4L-237ENST00000617539 NGLY1Q96IV0 654 aa32.5■■■□□ 2.79
NEDD4L-237ENST00000617539 STAC3Q96MF2 364 aa32.5■■■□□ 2.79
NEDD4L-237ENST00000617539 ARHGEF28Q8N1W1 1705 aaKnown RBP32.49■■■□□ 2.79
NEDD4L-237ENST00000617539 POGKQ9P215 609 aa32.49■■■□□ 2.79
NEDD4L-237ENST00000617539 QTRT2Q9H974 415 aaKnown RBP32.47■■■□□ 2.79
NEDD4L-237ENST00000617539 PHF8Q9UPP1 1060 aa32.46■■■□□ 2.79
NEDD4L-237ENST00000617539 SPATA31A3Q5VYP0 1347 aa32.46■■■□□ 2.79
NEDD4L-237ENST00000617539 RGS12O14924 1447 aa32.45■■■□□ 2.79
NEDD4L-237ENST00000617539 ANKARQ7Z5J8 1434 aa32.45■■■□□ 2.79
NEDD4L-237ENST00000617539 KRT28Q7Z3Y7 464 aa32.43■■■□□ 2.78
NEDD4L-237ENST00000617539 FNBP4Q8N3X1 1017 aaPredicted RBP32.43■■■□□ 2.78
NEDD4L-237ENST00000617539 HIRIP3Q9BW71 556 aaPredicted RBP32.43■■■□□ 2.78
NEDD4L-237ENST00000617539 KIAA1210Q9ULL0 1709 aa32.42■■■□□ 2.78
NEDD4L-237ENST00000617539 RBM6P78332 1123 aaKnown RBP32.41■■■□□ 2.78
NEDD4L-237ENST00000617539 MINK1Q8N4C8 1332 aaPredicted RBP32.41■■■□□ 2.78
NEDD4L-237ENST00000617539 USP21Q9UK80 565 aa32.4■■■□□ 2.78
NEDD4L-237ENST00000617539 TNS3Q68CZ2 1445 aa32.4■■■□□ 2.78
NEDD4L-237ENST00000617539 TULP4Q9NRJ4 1543 aa32.4■■■□□ 2.78
NEDD4L-237ENST00000617539 ABCA3Q99758 1704 aa32.38■■■□□ 2.77
NEDD4L-237ENST00000617539 BCL9LQ86UU0 1499 aa32.38■■■□□ 2.77
NEDD4L-237ENST00000617539 PRR36Q9H6K5 1346 aa32.38■■■□□ 2.77
NEDD4L-237ENST00000617539 TRPM3Q9HCF6 1732 aaPredicted RBP32.37■■■□□ 2.77
NEDD4L-237ENST00000617539 ATRNO75882 1429 aa32.37■■■□□ 2.77
NEDD4L-237ENST00000617539 PMFBP1Q8TBY8 1022 aa32.35■■■□□ 2.77
NEDD4L-237ENST00000617539 UPF1Q92900 1129 aaKnown RBP eCLIP32.35■■■□□ 2.77
NEDD4L-237ENST00000617539 SBNO1A3KN83 1393 aa32.34■■■□□ 2.77
NEDD4L-237ENST00000617539 TNKS1BP1Q9C0C2 1729 aaKnown RBP32.34■■■□□ 2.77
NEDD4L-237ENST00000617539 WASLO00401 505 aaPredicted RBP32.33■■■□□ 2.77
NEDD4L-237ENST00000617539 TRPC5Q9UL62 973 aaPredicted RBP32.33■■■□□ 2.77
NEDD4L-237ENST00000617539 PSME1Q06323 249 aa32.31■■■□□ 2.76
NEDD4L-237ENST00000617539 EIF3AQ14152 1382 aaKnown RBP32.31■■■□□ 2.76
NEDD4L-237ENST00000617539 ALS2Q96Q42 1657 aa32.3■■■□□ 2.76
NEDD4L-237ENST00000617539 SLIT2O94813 1529 aa32.29■■■□□ 2.76
NEDD4L-237ENST00000617539 ITSN1Q15811 1721 aa32.28■■■□□ 2.76
NEDD4L-237ENST00000617539 ATP7BP35670 1465 aa32.28■■■□□ 2.76
NEDD4L-237ENST00000617539 CABLES1Q8TDN4 633 aa32.27■■■□□ 2.76
NEDD4L-237ENST00000617539 NBPF1Q3BBV0 1214 aa32.26■■■□□ 2.75
NEDD4L-237ENST00000617539 ARHGEF10O15013 1369 aa32.26■■■□□ 2.75
NEDD4L-237ENST00000617539 PLCH1Q4KWH8 1693 aa32.25■■■□□ 2.75
NEDD4L-237ENST00000617539 TOPAZ1Q8N9V7 1692 aa32.23■■■□□ 2.75
NEDD4L-237ENST00000617539 CRYBG1Q9Y4K1 1723 aa32.21■■■□□ 2.75
NEDD4L-237ENST00000617539 GLI3P10071 1580 aa32.21■■■□□ 2.75
NEDD4L-237ENST00000617539 PLEKHG5O94827 1062 aa32.21■■■□□ 2.75
NEDD4L-237ENST00000617539 LMOD2Q6P5Q4 547 aa32.21■■■□□ 2.75
NEDD4L-237ENST00000617539 NWD2Q9ULI1 1742 aa32.2■■■□□ 2.75
NEDD4L-237ENST00000617539 EP400Q96L91 3159 aa32.2■■■□□ 2.75
NEDD4L-237ENST00000617539 GPRASP1Q5JY77 1395 aa32.19■■■□□ 2.74
NEDD4L-237ENST00000617539 UNC5CLQ8IV45 518 aa32.18■■■□□ 2.74
NEDD4L-237ENST00000617539 L3MBTL2Q969R5 705 aa32.18■■■□□ 2.74
NEDD4L-237ENST00000617539 SIN3AQ96ST3 1273 aa32.18■■■□□ 2.74
NEDD4L-237ENST00000617539 NUDT16Q96DE0 195 aaKnown RBP32.17■■■□□ 2.74
NEDD4L-237ENST00000617539 GJD4Q96KN9 370 aaPredicted RBP32.17■■■□□ 2.74
NEDD4L-237ENST00000617539 HAP1P54257 671 aaPredicted RBP32.16■■■□□ 2.74
NEDD4L-237ENST00000617539 CDK19Q9BWU1 502 aa32.16■■■□□ 2.74
NEDD4L-237ENST00000617539 RALGAPBQ86X10 1494 aa32.16■■■□□ 2.74
NEDD4L-237ENST00000617539 TRPM1Q7Z4N2 1603 aa32.15■■■□□ 2.74
NEDD4L-237ENST00000617539 QRICH2Q9H0J4 1663 aa32.14■■■□□ 2.74
NEDD4L-237ENST00000617539 NGDNQ8NEJ9 315 aaKnown RBP32.13■■■□□ 2.73
NEDD4L-237ENST00000617539 NRAPQ86VF7 1730 aa32.12■■■□□ 2.73
NEDD4L-237ENST00000617539 ATAD2Q6PL18 1390 aa32.11■■■□□ 2.73
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms