RNA–Protein interactions for RNA: ENST00000614461.4

RCC1L-202, Transcript of RCC1 like, humanhuman

TSL 1 (best) BASIC

Gene RCC1L, Length 2,419 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCC1L-202ENST00000614461 SPINK5Q9NQ38 1064 aaPredicted RBP34.76■■■■□ 3.16
RCC1L-202ENST00000614461 MLECQ14165 292 aa34.75■■■■□ 3.15
RCC1L-202ENST00000614461 C20orf194Q5TEA3 1177 aa34.75■■■■□ 3.15
RCC1L-202ENST00000614461 CRBNQ96SW2 442 aa34.73■■■■□ 3.15
RCC1L-202ENST00000614461 ZFYVE9O95405 1425 aa34.73■■■■□ 3.15
RCC1L-202ENST00000614461 FANCIQ9NVI1 1328 aa34.72■■■■□ 3.15
RCC1L-202ENST00000614461 DMRT2Q9Y5R5 561 aa34.71■■■■□ 3.15
RCC1L-202ENST00000614461 SLFN5Q08AF3 891 aa34.7■■■■□ 3.14
RCC1L-202ENST00000614461 POLR3AO14802 1390 aaPredicted RBP34.69■■■■□ 3.14
RCC1L-202ENST00000614461 STAG3Q9UJ98 1225 aa34.69■■■■□ 3.14
RCC1L-202ENST00000614461 ANP32EQ9BTT0 268 aa34.69■■■■□ 3.14
RCC1L-202ENST00000614461 MINK1Q8N4C8 1332 aaPredicted RBP34.68■■■■□ 3.14
RCC1L-202ENST00000614461 CGNL1Q0VF96 1302 aa34.67■■■■□ 3.14
RCC1L-202ENST00000614461 PRAM1Q96QH2 718 aa34.67■■■■□ 3.14
RCC1L-202ENST00000614461 SRPK2P78362 688 aaKnown RBP34.66■■■■□ 3.14
RCC1L-202ENST00000614461 ANKRD36BQ8N2N9 1353 aa34.64■■■■□ 3.14
RCC1L-202ENST00000614461 MTHFSP49914 203 aa34.64■■■■□ 3.14
RCC1L-202ENST00000614461 CLTCQ00610 1675 aaKnown RBP34.63■■■■□ 3.13
RCC1L-202ENST00000614461 PTPRMP28827 1452 aa34.63■■■■□ 3.13
RCC1L-202ENST00000614461 SHPRHQ149N8 1683 aa34.62■■■■□ 3.13
RCC1L-202ENST00000614461 YTHDC2Q9H6S0 1430 aaKnown RBP34.61■■■■□ 3.13
RCC1L-202ENST00000614461 TRMT2AQ8IZ69 625 aaKnown RBP34.61■■■■□ 3.13
RCC1L-202ENST00000614461 POGKQ9P215 609 aa34.6■■■■□ 3.13
RCC1L-202ENST00000614461 NEUROD2Q15784 382 aa34.59■■■■□ 3.13
RCC1L-202ENST00000614461 PUS7Q96PZ0 661 aaKnown RBP34.59■■■■□ 3.13
RCC1L-202ENST00000614461 RRP7AQ9Y3A4 280 aaKnown RBP34.59■■■■□ 3.13
RCC1L-202ENST00000614461 USP32Q8NFA0 1604 aa34.59■■■■□ 3.13
RCC1L-202ENST00000614461 A0A1W2PP64 1363 aa34.59■■■■□ 3.13
RCC1L-202ENST00000614461 ALKQ9UM73 1620 aa34.56■■■■□ 3.12
RCC1L-202ENST00000614461 AGLP35573 1532 aa34.56■■■■□ 3.12
RCC1L-202ENST00000614461 SKAP1Q86WV1 359 aa34.56■■■■□ 3.12
RCC1L-202ENST00000614461 REREQ9P2R6 1566 aa34.54■■■■□ 3.12
RCC1L-202ENST00000614461 GGNBP2Q9H3C7 697 aa34.52■■■■□ 3.12
RCC1L-202ENST00000614461 WWC1Q8IX03 1113 aa34.52■■■■□ 3.12
RCC1L-202ENST00000614461 BCAR3O75815 825 aa34.51■■■■□ 3.11
RCC1L-202ENST00000614461 A2ML1A8K2U0 1454 aa34.5■■■■□ 3.11
RCC1L-202ENST00000614461 NKTRP30414 1462 aaKnown RBP34.5■■■■□ 3.11
RCC1L-202ENST00000614461 E9PSI1 815 aa34.5■■■■□ 3.11
RCC1L-202ENST00000614461 WAPLQ7Z5K2 1190 aa34.47■■■■□ 3.11
RCC1L-202ENST00000614461 TCP11L2Q8N4U5 519 aa34.47■■■■□ 3.11
RCC1L-202ENST00000614461 RUNDC1Q96C34 613 aa34.47■■■■□ 3.11
RCC1L-202ENST00000614461 CDK19Q9BWU1 502 aa34.46■■■■□ 3.11
RCC1L-202ENST00000614461 PPP6R1Q9UPN7 881 aa34.46■■■■□ 3.11
RCC1L-202ENST00000614461 ABCC11Q96J66 1382 aa34.46■■■■□ 3.11
RCC1L-202ENST00000614461 CFAP53Q96M91 514 aa34.45■■■■□ 3.11
RCC1L-202ENST00000614461 SPATA31D1Q6ZQQ2 1576 aa34.45■■■■□ 3.11
RCC1L-202ENST00000614461 RIMS2Q9UQ26 1411 aa34.44■■■■□ 3.1
RCC1L-202ENST00000614461 NSD2O96028 1365 aa34.44■■■■□ 3.1
RCC1L-202ENST00000614461 CD163L1Q9NR16 1453 aa34.44■■■■□ 3.1
RCC1L-202ENST00000614461 KIF13AQ9H1H9 1805 aa34.44■■■■□ 3.1
RCC1L-202ENST00000614461 ATAD2Q6PL18 1390 aa34.42■■■■□ 3.1
RCC1L-202ENST00000614461 IQSEC2Q5JU85 1478 aa34.41■■■■□ 3.1
RCC1L-202ENST00000614461 U2AF1L5P0DN76 240 aaPredicted RBP34.41■■■■□ 3.1
RCC1L-202ENST00000614461 U2AF1Q01081 240 aaKnown RBP eCLIP34.41■■■■□ 3.1
RCC1L-202ENST00000614461 CABP1Q9NZU7 370 aa34.41■■■■□ 3.1
RCC1L-202ENST00000614461 ARHGEF40Q8TER5 1519 aa34.4■■■■□ 3.1
RCC1L-202ENST00000614461 FYB1O15117 783 aa34.4■■■■□ 3.1
RCC1L-202ENST00000614461 NINLQ9Y2I6 1382 aa34.4■■■■□ 3.1
RCC1L-202ENST00000614461 GOLGA6L2Q8N9W4 650 aaPredicted RBP34.39■■■■□ 3.1
RCC1L-202ENST00000614461 TERF2IPQ9NYB0 399 aa34.39■■■■□ 3.1
RCC1L-202ENST00000614461 NGEFQ8N5V2 710 aa34.38■■■■□ 3.09
RCC1L-202ENST00000614461 TCERG1O14776 1098 aaKnown RBP34.36■■■■□ 3.09
RCC1L-202ENST00000614461 ZMYM3Q14202 1370 aa34.35■■■■□ 3.09
RCC1L-202ENST00000614461 ESF1Q9H501 851 aaKnown RBP34.34■■■■□ 3.09
RCC1L-202ENST00000614461 PHF23Q9BUL5 403 aaPredicted RBP34.32■■■■□ 3.09
RCC1L-202ENST00000614461 NLRP1Q9C000 1473 aa34.32■■■■□ 3.09
RCC1L-202ENST00000614461 KDM2BQ8NHM5 1336 aa34.32■■■■□ 3.08
RCC1L-202ENST00000614461 U2SURPO15042 1029 aaKnown RBP34.31■■■■□ 3.08
RCC1L-202ENST00000614461 SETD1AO15047 1707 aaKnown RBP34.31■■■■□ 3.08
RCC1L-202ENST00000614461 ERICH6Q7L0X2 663 aa34.3■■■■□ 3.08
RCC1L-202ENST00000614461 HDGFL2Q7Z4V5 671 aaPredicted RBP34.3■■■■□ 3.08
RCC1L-202ENST00000614461 METP08581 1390 aa34.29■■■■□ 3.08
RCC1L-202ENST00000614461 FBLN1P23142 703 aa34.29■■■■□ 3.08
RCC1L-202ENST00000614461 SUGP2Q8IX01 1082 aaKnown RBP eCLIP34.29■■■■□ 3.08
RCC1L-202ENST00000614461 PDE4AP27815 886 aa34.29■■■■□ 3.08
RCC1L-202ENST00000614461 NRXN3Q9Y4C0 1643 aa34.26■■■■□ 3.08
RCC1L-202ENST00000614461 TXNDC2Q86VQ3 553 aa34.26■■■■□ 3.07
RCC1L-202ENST00000614461 COL3A1P02461 1466 aaPredicted RBP34.24■■■■□ 3.07
RCC1L-202ENST00000614461 PANK1Q8TE04 598 aa34.22■■■■□ 3.07
RCC1L-202ENST00000614461 NPM2Q86SE8 214 aaKnown RBP34.22■■■■□ 3.07
RCC1L-202ENST00000614461 WDR63Q8IWG1 891 aa34.22■■■■□ 3.07
RCC1L-202ENST00000614461 FRAT1Q92837 279 aaPredicted RBP34.22■■■■□ 3.07
RCC1L-202ENST00000614461 BCL2L13Q9BXK5 485 aa34.22■■■■□ 3.07
RCC1L-202ENST00000614461 DLC1Q96QB1 1528 aa34.22■■■■□ 3.07
RCC1L-202ENST00000614461 PAK3O75914 559 aaPredicted RBP34.21■■■■□ 3.07
RCC1L-202ENST00000614461 ANP32AP39687 249 aaKnown RBP34.21■■■■□ 3.07
RCC1L-202ENST00000614461 BACH2Q9BYV9 841 aa34.21■■■■□ 3.07
RCC1L-202ENST00000614461 ANKRD26Q9UPS8 1709 aa34.2■■■■□ 3.07
RCC1L-202ENST00000614461 NCKAP5LQ9HCH0 1330 aa34.2■■■■□ 3.07
RCC1L-202ENST00000614461 CANXP27824 592 aaKnown RBP34.2■■■■□ 3.06
RCC1L-202ENST00000614461 CCDC27Q2M243 656 aa34.2■■■■□ 3.06
RCC1L-202ENST00000614461 CENPQQ7L2Z9 268 aaPredicted RBP34.2■■■■□ 3.06
RCC1L-202ENST00000614461 MS4A1P11836 297 aa34.19■■■■□ 3.06
RCC1L-202ENST00000614461 PLEKHF1Q96S99 279 aa34.19■■■■□ 3.06
RCC1L-202ENST00000614461 RARSP54136 660 aaKnown RBP34.18■■■■□ 3.06
RCC1L-202ENST00000614461 MED14O60244 1454 aa34.17■■■■□ 3.06
RCC1L-202ENST00000614461 TNNQ9UQP3 1299 aa34.17■■■■□ 3.06
RCC1L-202ENST00000614461 COG6Q9Y2V7 657 aa34.17■■■■□ 3.06
RCC1L-202ENST00000614461 PPM1GO15355 546 aaPredicted RBP34.16■■■■□ 3.06
RCC1L-202ENST00000614461 TNRQ92752 1358 aa34.16■■■■□ 3.06
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms