RNA–Protein interactions for RNA: ENST00000612795.1

CSNK1E-215, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 885 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-215ENST00000612795 CDC42BPGQ6DT37 1551 aa26.18■■□□□ 1.78
CSNK1E-215ENST00000612795 ZRANB1Q9UGI0 708 aa26.17■■□□□ 1.78
CSNK1E-215ENST00000612795 SRCAPQ6ZRS2 3230 aa26.17■■□□□ 1.78
CSNK1E-215ENST00000612795 MYOM2P54296 1465 aa26.17■■□□□ 1.78
CSNK1E-215ENST00000612795 TNKS1BP1Q9C0C2 1729 aaKnown RBP26.15■■□□□ 1.78
CSNK1E-215ENST00000612795 EP400Q96L91 3159 aa26.14■■□□□ 1.77
CSNK1E-215ENST00000612795 NPHP3Q7Z494 1330 aa26.14■■□□□ 1.77
CSNK1E-215ENST00000612795 PXDNQ92626 1479 aa26.12■■□□□ 1.77
CSNK1E-215ENST00000612795 ESCO1Q5FWF5 840 aa26.1■■□□□ 1.77
CSNK1E-215ENST00000612795 BCL9LQ86UU0 1499 aa26.1■■□□□ 1.77
CSNK1E-215ENST00000612795 PPARGC1BQ86YN6 1023 aaKnown RBP26.09■■□□□ 1.77
CSNK1E-215ENST00000612795 RPGRIP1LQ68CZ1 1315 aa26.09■■□□□ 1.77
CSNK1E-215ENST00000612795 NAIPQ13075 1403 aa26.07■■□□□ 1.76
CSNK1E-215ENST00000612795 CCDC125Q86Z20 511 aa26.07■■□□□ 1.76
CSNK1E-215ENST00000612795 XPCQ01831 940 aaPredicted RBP26.06■■□□□ 1.76
CSNK1E-215ENST00000612795 BRWD3Q6RI45 1802 aa26.05■■□□□ 1.76
CSNK1E-215ENST00000612795 LRPPRCP42704 1394 aaKnown RBP26.05■■□□□ 1.76
CSNK1E-215ENST00000612795 KIF1AQ12756 1690 aa26.04■■□□□ 1.76
CSNK1E-215ENST00000612795 GJD4Q96KN9 370 aaPredicted RBP26.04■■□□□ 1.76
CSNK1E-215ENST00000612795 FOXO3O43524 673 aa26.03■■□□□ 1.76
CSNK1E-215ENST00000612795 GLI3P10071 1580 aa26.03■■□□□ 1.76
CSNK1E-215ENST00000612795 KNDC1Q76NI1 1749 aa26.02■■□□□ 1.76
CSNK1E-215ENST00000612795 FMN2Q9NZ56 1722 aa26.02■■□□□ 1.76
CSNK1E-215ENST00000612795 USP32Q8NFA0 1604 aa26■■□□□ 1.75
CSNK1E-215ENST00000612795 IFT172Q9UG01 1749 aa26■■□□□ 1.75
CSNK1E-215ENST00000612795 RALGAPBQ86X10 1494 aa25.98■■□□□ 1.75
CSNK1E-215ENST00000612795 BLMP54132 1417 aaPredicted RBP25.98■■□□□ 1.75
CSNK1E-215ENST00000612795 NUTM2FA1L443 756 aa25.98■■□□□ 1.75
CSNK1E-215ENST00000612795 RRBP1Q9P2E9 1410 aaKnown RBP25.97■■□□□ 1.75
CSNK1E-215ENST00000612795 SLC4A1APQ9BWU0 796 aaKnown RBP25.97■■□□□ 1.75
CSNK1E-215ENST00000612795 SLIT2O94813 1529 aa25.97■■□□□ 1.75
CSNK1E-215ENST00000612795 PLCH1Q4KWH8 1693 aa25.96■■□□□ 1.75
CSNK1E-215ENST00000612795 TECPR2O15040 1411 aa25.96■■□□□ 1.75
CSNK1E-215ENST00000612795 RGPD8O14715 1765 aaPredicted RBP25.95■■□□□ 1.75
CSNK1E-215ENST00000612795 UNC5CLQ8IV45 518 aa25.95■■□□□ 1.74
CSNK1E-215ENST00000612795 STK26Q9P289 416 aa25.95■■□□□ 1.74
CSNK1E-215ENST00000612795 CCDC144AA2RUR9 1427 aa25.95■■□□□ 1.74
CSNK1E-215ENST00000612795 NWD2Q9ULI1 1742 aa25.93■■□□□ 1.74
CSNK1E-215ENST00000612795 ABCA3Q99758 1704 aa25.92■■□□□ 1.74
CSNK1E-215ENST00000612795 WAPLQ7Z5K2 1190 aa25.92■■□□□ 1.74
CSNK1E-215ENST00000612795 SPATA31A3Q5VYP0 1347 aa25.91■■□□□ 1.74
CSNK1E-215ENST00000612795 ADGRF5Q8IZF2 1346 aa25.91■■□□□ 1.74
CSNK1E-215ENST00000612795 HAP1P54257 671 aaPredicted RBP25.9■■□□□ 1.74
CSNK1E-215ENST00000612795 SF3B2Q13435 895 aaKnown RBP25.9■■□□□ 1.74
CSNK1E-215ENST00000612795 PLEKHH1Q9ULM0 1364 aa25.89■■□□□ 1.74
CSNK1E-215ENST00000612795 LRP5O75197 1615 aa25.88■■□□□ 1.73
CSNK1E-215ENST00000612795 ABCC11Q96J66 1382 aa25.87■■□□□ 1.73
CSNK1E-215ENST00000612795 DEFB132Q7Z7B7 95 aa25.87■■□□□ 1.73
CSNK1E-215ENST00000612795 ANKRD30BQ9BXX2 1392 aa25.86■■□□□ 1.73
CSNK1E-215ENST00000612795 TNS3Q68CZ2 1445 aa25.86■■□□□ 1.73
CSNK1E-215ENST00000612795 RGL3Q3MIN7 710 aa25.85■■□□□ 1.73
CSNK1E-215ENST00000612795 KRT28Q7Z3Y7 464 aa25.85■■□□□ 1.73
CSNK1E-215ENST00000612795 TMEM132EQ6IEE7 984 aa25.84■■□□□ 1.73
CSNK1E-215ENST00000612795 SEPT12Q8IYM1 358 aa25.84■■□□□ 1.73
CSNK1E-215ENST00000612795 CCDC9Q9Y3X0 531 aaKnown RBP25.84■■□□□ 1.73
CSNK1E-215ENST00000612795 PIK3C2GO75747 1445 aa25.83■■□□□ 1.73
CSNK1E-215ENST00000612795 YTHDC2Q9H6S0 1430 aaKnown RBP25.83■■□□□ 1.73
CSNK1E-215ENST00000612795 SPATA31E1Q6ZUB1 1445 aa25.82■■□□□ 1.72
CSNK1E-215ENST00000612795 PLEKHG5O94827 1062 aa25.82■■□□□ 1.72
CSNK1E-215ENST00000612795 VPS72Q15906 364 aa25.81■■□□□ 1.72
CSNK1E-215ENST00000612795 PSME1Q06323 249 aa25.79■■□□□ 1.72
CSNK1E-215ENST00000612795 CABLES1Q8TDN4 633 aa25.79■■□□□ 1.72
CSNK1E-215ENST00000612795 NRAPQ86VF7 1730 aa25.78■■□□□ 1.72
CSNK1E-215ENST00000612795 PHF8Q9UPP1 1060 aa25.78■■□□□ 1.72
CSNK1E-215ENST00000612795 A0A0G2JS52 829 aa25.77■■□□□ 1.72
CSNK1E-215ENST00000612795 MYT1Q01538 1121 aa25.77■■□□□ 1.72
CSNK1E-215ENST00000612795 LMOD2Q6P5Q4 547 aa25.77■■□□□ 1.72
CSNK1E-215ENST00000612795 KRT27Q7Z3Y8 459 aa25.77■■□□□ 1.72
CSNK1E-215ENST00000612795 NRXN1Q9ULB1 1477 aa25.77■■□□□ 1.72
CSNK1E-215ENST00000612795 ARHGEF10O15013 1369 aa25.76■■□□□ 1.71
CSNK1E-215ENST00000612795 RGPD1P0DJD0 1748 aa25.75■■□□□ 1.71
CSNK1E-215ENST00000612795 SBNO1A3KN83 1393 aa25.75■■□□□ 1.71
CSNK1E-215ENST00000612795 BAG6P46379 1132 aa25.72■■□□□ 1.71
CSNK1E-215ENST00000612795 ONECUT3O60422 494 aaPredicted RBP25.71■■□□□ 1.71
CSNK1E-215ENST00000612795 COL14A1Q05707 1796 aaKnown RBP25.71■■□□□ 1.71
CSNK1E-215ENST00000612795 SIRT1Q96EB6 747 aa25.7■■□□□ 1.7
CSNK1E-215ENST00000612795 TRPM3Q9HCF6 1732 aaPredicted RBP25.7■■□□□ 1.7
CSNK1E-215ENST00000612795 PSDA5PKW4 1024 aaPredicted RBP25.69■■□□□ 1.7
CSNK1E-215ENST00000612795 DHX57Q6P158 1386 aaKnown RBP25.69■■□□□ 1.7
CSNK1E-215ENST00000612795 SAFB2Q14151 953 aaKnown RBP eCLIP25.68■■□□□ 1.7
CSNK1E-215ENST00000612795 ALS2Q96Q42 1657 aa25.68■■□□□ 1.7
CSNK1E-215ENST00000612795 ADGRB2O60241 1585 aa25.66■■□□□ 1.7
CSNK1E-215ENST00000612795 ANKARQ7Z5J8 1434 aa25.65■■□□□ 1.7
CSNK1E-215ENST00000612795 FAM83GA6ND36 823 aa25.65■■□□□ 1.7
CSNK1E-215ENST00000612795 FAM98CQ17RN3 349 aaKnown RBP25.65■■□□□ 1.7
CSNK1E-215ENST00000612795 PRAM1Q96QH2 718 aa25.65■■□□□ 1.7
CSNK1E-215ENST00000612795 MPHOSPH9Q99550 1183 aa25.65■■□□□ 1.7
CSNK1E-215ENST00000612795 C14orf93Q9H972 538 aaKnown RBP25.65■■□□□ 1.7
CSNK1E-215ENST00000612795 TNS1Q9HBL0 1735 aaKnown RBP25.65■■□□□ 1.7
CSNK1E-215ENST00000612795 PMFBP1Q8TBY8 1022 aa25.64■■□□□ 1.7
CSNK1E-215ENST00000612795 DLC1Q96QB1 1528 aa25.63■■□□□ 1.69
CSNK1E-215ENST00000612795 BTG4Q9NY30 223 aa25.63■■□□□ 1.69
CSNK1E-215ENST00000612795 HRCP23327 699 aa25.62■■□□□ 1.69
CSNK1E-215ENST00000612795 CFAP70Q5T0N1 1121 aa25.62■■□□□ 1.69
CSNK1E-215ENST00000612795 CRYBG1Q9Y4K1 1723 aa25.62■■□□□ 1.69
CSNK1E-215ENST00000612795 POGKQ9P215 609 aa25.61■■□□□ 1.69
CSNK1E-215ENST00000612795 THSD7AQ9UPZ6 1657 aa25.6■■□□□ 1.69
CSNK1E-215ENST00000612795 GPRASP1Q5JY77 1395 aa25.58■■□□□ 1.69
CSNK1E-215ENST00000612795 EN1Q05925 392 aaPredicted RBP25.58■■□□□ 1.69
CSNK1E-215ENST00000612795 EIF3AQ14152 1382 aaKnown RBP25.56■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 110 ms