RNA–Protein interactions for RNA: ENST00000611963.4

TARDBP-213, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 739 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-213ENST00000611963 SPDYE4A6NLX3 237 aa11.34□□□□□ -0.59
TARDBP-213ENST00000611963 C11orf95C9JLR9 678 aaPredicted RBP11.34□□□□□ -0.59
TARDBP-213ENST00000611963 VGFO15240 615 aaPredicted RBP11.33□□□□□ -0.6
TARDBP-213ENST00000611963 DDX10Q13206 875 aaKnown RBP11.33□□□□□ -0.6
TARDBP-213ENST00000611963 SLC26A8Q96RN1 970 aa11.33□□□□□ -0.6
TARDBP-213ENST00000611963 WASHC2AQ641Q2 1341 aa11.33□□□□□ -0.6
TARDBP-213ENST00000611963 SETBP1Q9Y6X0 1596 aa11.33□□□□□ -0.6
TARDBP-213ENST00000611963 CCDC7Q96M83 1385 aa11.32□□□□□ -0.6
TARDBP-213ENST00000611963 C14orf93Q9H972 538 aaKnown RBP11.32□□□□□ -0.6
TARDBP-213ENST00000611963 ADGRB1O14514 1584 aa11.32□□□□□ -0.6
TARDBP-213ENST00000611963 PLEKHG1Q9ULL1 1385 aa11.31□□□□□ -0.6
TARDBP-213ENST00000611963 ASXL1Q8IXJ9 1541 aa11.31□□□□□ -0.6
TARDBP-213ENST00000611963 XIRP1Q702N8 1843 aaKnown RBP11.31□□□□□ -0.6
TARDBP-213ENST00000611963 PITPNM1O00562 1244 aa11.31□□□□□ -0.6
TARDBP-213ENST00000611963 SETD1AO15047 1707 aaKnown RBP11.31□□□□□ -0.6
TARDBP-213ENST00000611963 TMEM132EQ6IEE7 984 aa11.3□□□□□ -0.6
TARDBP-213ENST00000611963 NRXN3Q9Y4C0 1643 aa11.3□□□□□ -0.6
TARDBP-213ENST00000611963 KIF7Q2M1P5 1343 aa11.3□□□□□ -0.6
TARDBP-213ENST00000611963 NWD1Q149M9 1564 aa11.29□□□□□ -0.6
TARDBP-213ENST00000611963 ADAMTS13Q76LX8 1427 aa11.29□□□□□ -0.6
TARDBP-213ENST00000611963 TOM1O60784 492 aa11.29□□□□□ -0.6
TARDBP-213ENST00000611963 KCNA6P17658 529 aa11.29□□□□□ -0.6
TARDBP-213ENST00000611963 PIP4K2BP78356 416 aa11.29□□□□□ -0.6
TARDBP-213ENST00000611963 CHRDL2Q6WN34 429 aa11.29□□□□□ -0.6
TARDBP-213ENST00000611963 POLR3GLQ9BT43 218 aa11.29□□□□□ -0.6
TARDBP-213ENST00000611963 ARHGEF28Q8N1W1 1705 aaKnown RBP11.29□□□□□ -0.6
TARDBP-213ENST00000611963 QRICH2Q9H0J4 1663 aa11.27□□□□□ -0.6
TARDBP-213ENST00000611963 HDGFP51858 240 aaKnown RBP11.27□□□□□ -0.61
TARDBP-213ENST00000611963 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.27□□□□□ -0.61
TARDBP-213ENST00000611963 RBM33Q96EV2 1170 aaKnown RBP11.27□□□□□ -0.61
TARDBP-213ENST00000611963 TESK2Q96S53 571 aa11.27□□□□□ -0.61
TARDBP-213ENST00000611963 CLEC11AQ9Y240 323 aa11.27□□□□□ -0.61
TARDBP-213ENST00000611963 TBX22Q9Y458 520 aa11.27□□□□□ -0.61
TARDBP-213ENST00000611963 TMEM94Q12767 1356 aa11.27□□□□□ -0.61
TARDBP-213ENST00000611963 EIF3AQ14152 1382 aaKnown RBP11.27□□□□□ -0.61
TARDBP-213ENST00000611963 DISP3Q9P2K9 1392 aa11.27□□□□□ -0.61
TARDBP-213ENST00000611963 NKTRP30414 1462 aaKnown RBP11.26□□□□□ -0.61
TARDBP-213ENST00000611963 HSPA1LP34931 641 aa11.26□□□□□ -0.61
TARDBP-213ENST00000611963 MIER1Q8N108 512 aa11.26□□□□□ -0.61
TARDBP-213ENST00000611963 BCANQ96GW7 911 aa11.26□□□□□ -0.61
TARDBP-213ENST00000611963 TRAK1Q9UPV9 953 aa11.26□□□□□ -0.61
TARDBP-213ENST00000611963 CHD2O14647 1828 aaKnown RBP11.25□□□□□ -0.61
TARDBP-213ENST00000611963 PROSER2Q86WR7 435 aaPredicted RBP11.24□□□□□ -0.61
TARDBP-213ENST00000611963 STK26Q9P289 416 aa11.24□□□□□ -0.61
TARDBP-213ENST00000611963 DIP2AQ14689 1571 aa11.24□□□□□ -0.61
TARDBP-213ENST00000611963 PTPRUQ92729 1446 aa11.23□□□□□ -0.61
TARDBP-213ENST00000611963 YTHDC2Q9H6S0 1430 aaKnown RBP11.23□□□□□ -0.61
TARDBP-213ENST00000611963 TMF1P82094 1093 aa11.22□□□□□ -0.61
TARDBP-213ENST00000611963 PIK3R4Q99570 1358 aa11.22□□□□□ -0.61
TARDBP-213ENST00000611963 CENPJQ9HC77 1338 aaPredicted RBP11.22□□□□□ -0.61
TARDBP-213ENST00000611963 METP08581 1390 aa11.21□□□□□ -0.61
TARDBP-213ENST00000611963 FKBP8Q14318 412 aa11.21□□□□□ -0.61
TARDBP-213ENST00000611963 KNDC1Q76NI1 1749 aa11.21□□□□□ -0.62
TARDBP-213ENST00000611963 MYOM1P52179 1685 aa11.2□□□□□ -0.62
TARDBP-213ENST00000611963 LRPPRCP42704 1394 aaKnown RBP11.19□□□□□ -0.62
TARDBP-213ENST00000611963 XRN1Q8IZH2 1706 aaKnown RBP11.19□□□□□ -0.62
TARDBP-213ENST00000611963 SAFB2Q14151 953 aaKnown RBP eCLIP11.19□□□□□ -0.62
TARDBP-213ENST00000611963 FAM135BQ49AJ0 1406 aa11.18□□□□□ -0.62
TARDBP-213ENST00000611963 MSH6P52701 1360 aa11.18□□□□□ -0.62
TARDBP-213ENST00000611963 SBNO2Q9Y2G9 1366 aa11.18□□□□□ -0.62
TARDBP-213ENST00000611963 POTEHQ6S545 545 aa11.18□□□□□ -0.62
TARDBP-213ENST00000611963 ILDR2Q71H61 639 aa11.18□□□□□ -0.62
TARDBP-213ENST00000611963 AMOTL2Q9Y2J4 779 aa11.18□□□□□ -0.62
TARDBP-213ENST00000611963 DLC1Q96QB1 1528 aa11.18□□□□□ -0.62
TARDBP-213ENST00000611963 TULP4Q9NRJ4 1543 aa11.18□□□□□ -0.62
TARDBP-213ENST00000611963 NCOA3Q9Y6Q9 1424 aa11.18□□□□□ -0.62
TARDBP-213ENST00000611963 PRAM1Q96QH2 718 aa11.17□□□□□ -0.62
TARDBP-213ENST00000611963 MED1Q15648 1581 aaPredicted RBP11.16□□□□□ -0.62
TARDBP-213ENST00000611963 ANP32CO43423 234 aa11.16□□□□□ -0.62
TARDBP-213ENST00000611963 SPDYE1Q8NFV5 336 aaPredicted RBP11.16□□□□□ -0.62
TARDBP-213ENST00000611963 POGKQ9P215 609 aa11.16□□□□□ -0.62
TARDBP-213ENST00000611963 ROBO1Q9Y6N7 1651 aa11.16□□□□□ -0.62
TARDBP-213ENST00000611963 ABCC11Q96J66 1382 aa11.16□□□□□ -0.62
TARDBP-213ENST00000611963 PLEKHH1Q9ULM0 1364 aa11.16□□□□□ -0.62
TARDBP-213ENST00000611963 MINK1Q8N4C8 1332 aaPredicted RBP11.15□□□□□ -0.62
TARDBP-213ENST00000611963 CDCA8Q53HL2 280 aa11.15□□□□□ -0.62
TARDBP-213ENST00000611963 WAPLQ7Z5K2 1190 aa11.15□□□□□ -0.62
TARDBP-213ENST00000611963 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.15□□□□□ -0.63
TARDBP-213ENST00000611963 PIP4P2Q8N4L2 257 aa11.14□□□□□ -0.63
TARDBP-213ENST00000611963 SLAIN2Q9P270 581 aa11.14□□□□□ -0.63
TARDBP-213ENST00000611963 TECPR2O15040 1411 aa11.14□□□□□ -0.63
TARDBP-213ENST00000611963 CNGB1Q14028 1251 aaPredicted RBP11.13□□□□□ -0.63
TARDBP-213ENST00000611963 C19orf44Q9H6X5 657 aa11.13□□□□□ -0.63
TARDBP-213ENST00000611963 EVC2Q86UK5 1308 aa11.12□□□□□ -0.63
TARDBP-213ENST00000611963 SLC24A1O60721 1099 aa11.12□□□□□ -0.63
TARDBP-213ENST00000611963 C14orf37Q86TY3 774 aa11.12□□□□□ -0.63
TARDBP-213ENST00000611963 PANK3Q9H999 370 aa11.12□□□□□ -0.63
TARDBP-213ENST00000611963 ROBO2Q9HCK4 1378 aa11.12□□□□□ -0.63
TARDBP-213ENST00000611963 CADPS2Q86UW7 1296 aa11.11□□□□□ -0.63
TARDBP-213ENST00000611963 CABP2Q9NPB3 220 aa11.11□□□□□ -0.63
TARDBP-213ENST00000611963 DCCP43146 1447 aa11.1□□□□□ -0.63
TARDBP-213ENST00000611963 PTCH1Q13635 1447 aa11.09□□□□□ -0.63
TARDBP-213ENST00000611963 ADGRL3Q9HAR2 1447 aa11.09□□□□□ -0.63
TARDBP-213ENST00000611963 NALCNQ8IZF0 1738 aa11.09□□□□□ -0.63
TARDBP-213ENST00000611963 ATF3P18847 181 aa11.09□□□□□ -0.63
TARDBP-213ENST00000611963 PRKRIP1Q9H875 184 aaPredicted RBP11.09□□□□□ -0.63
TARDBP-213ENST00000611963 COL16A1Q07092 1604 aaPredicted RBP11.09□□□□□ -0.63
TARDBP-213ENST00000611963 MST1RQ04912 1400 aa11.09□□□□□ -0.63
TARDBP-213ENST00000611963 SRPK2P78362 688 aaKnown RBP11.08□□□□□ -0.64
TARDBP-213ENST00000611963 TMC1Q8TDI8 760 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms