RNA–Protein interactions for RNA: ENST00000611733.4

CLK4-215, Transcript of CDC like kinase 4, humanhuman

TSL 5 BASIC

Gene CLK4, Length 2,182 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-215ENST00000611733 NKTRP30414 1462 aaKnown RBP16.9■□□□□ 0.3
CLK4-215ENST00000611733 DISP3Q9P2K9 1392 aa16.9■□□□□ 0.3
CLK4-215ENST00000611733 LRRC7Q96NW7 1537 aa16.9■□□□□ 0.3
CLK4-215ENST00000611733 QRICH2Q9H0J4 1663 aa16.9■□□□□ 0.3
CLK4-215ENST00000611733 LTBP4Q8N2S1 1624 aa16.89■□□□□ 0.29
CLK4-215ENST00000611733 C14orf37Q86TY3 774 aa16.89■□□□□ 0.29
CLK4-215ENST00000611733 CDK19Q9BWU1 502 aa16.88■□□□□ 0.29
CLK4-215ENST00000611733 NUTM2FA1L443 756 aa16.87■□□□□ 0.29
CLK4-215ENST00000611733 CABP2Q9NPB3 220 aa16.87■□□□□ 0.29
CLK4-215ENST00000611733 SBNO2Q9Y2G9 1366 aa16.87■□□□□ 0.29
CLK4-215ENST00000611733 ZNF316A6NFI3 1004 aaPredicted RBP16.86■□□□□ 0.29
CLK4-215ENST00000611733 WASLO00401 505 aaPredicted RBP16.86■□□□□ 0.29
CLK4-215ENST00000611733 TMF1P82094 1093 aa16.86■□□□□ 0.29
CLK4-215ENST00000611733 POLR3GLQ9BT43 218 aa16.86■□□□□ 0.29
CLK4-215ENST00000611733 TULP4Q9NRJ4 1543 aa16.85■□□□□ 0.29
CLK4-215ENST00000611733 WASHC2AQ641Q2 1341 aa16.84■□□□□ 0.29
CLK4-215ENST00000611733 C19orf44Q9H6X5 657 aa16.84■□□□□ 0.29
CLK4-215ENST00000611733 ADGRL3Q9HAR2 1447 aa16.84■□□□□ 0.29
CLK4-215ENST00000611733 XIRP1Q702N8 1843 aaKnown RBP16.84■□□□□ 0.29
CLK4-215ENST00000611733 KIF7Q2M1P5 1343 aa16.84■□□□□ 0.29
CLK4-215ENST00000611733 EVC2Q86UK5 1308 aa16.84■□□□□ 0.29
CLK4-215ENST00000611733 NALCNQ8IZF0 1738 aa16.84■□□□□ 0.29
CLK4-215ENST00000611733 SRPK2P78362 688 aaKnown RBP16.84■□□□□ 0.29
CLK4-215ENST00000611733 PRR36Q9H6K5 1346 aa16.82■□□□□ 0.28
CLK4-215ENST00000611733 NCOA3Q9Y6Q9 1424 aa16.81■□□□□ 0.28
CLK4-215ENST00000611733 CCDC7Q96M83 1385 aa16.8■□□□□ 0.28
CLK4-215ENST00000611733 NUDT16Q96DE0 195 aaKnown RBP16.79■□□□□ 0.28
CLK4-215ENST00000611733 ADGRB2O60241 1585 aa16.79■□□□□ 0.28
CLK4-215ENST00000611733 MSH6P52701 1360 aa16.79■□□□□ 0.28
CLK4-215ENST00000611733 SLC24A1O60721 1099 aa16.78■□□□□ 0.28
CLK4-215ENST00000611733 ATF3P18847 181 aa16.78■□□□□ 0.28
CLK4-215ENST00000611733 SLC12A5Q9H2X9 1139 aa16.77■□□□□ 0.28
CLK4-215ENST00000611733 CABP1Q9NZU7 370 aa16.76■□□□□ 0.27
CLK4-215ENST00000611733 CDC42BPGQ6DT37 1551 aa16.76■□□□□ 0.27
CLK4-215ENST00000611733 CDCA8Q53HL2 280 aa16.75■□□□□ 0.27
CLK4-215ENST00000611733 CADPS2Q86UW7 1296 aa16.75■□□□□ 0.27
CLK4-215ENST00000611733 TMC1Q8TDI8 760 aa16.75■□□□□ 0.27
CLK4-215ENST00000611733 CERKQ8TCT0 537 aa16.75■□□□□ 0.27
CLK4-215ENST00000611733 ORAI2Q96SN7 254 aa16.75■□□□□ 0.27
CLK4-215ENST00000611733 USP32Q8NFA0 1604 aa16.75■□□□□ 0.27
CLK4-215ENST00000611733 ATP7BP35670 1465 aa16.74■□□□□ 0.27
CLK4-215ENST00000611733 PUS7Q96PZ0 661 aaKnown RBP16.74■□□□□ 0.27
CLK4-215ENST00000611733 CCDC61Q9Y6R9 512 aa16.74■□□□□ 0.27
CLK4-215ENST00000611733 FMN2Q9NZ56 1722 aa16.74■□□□□ 0.27
CLK4-215ENST00000611733 DDX10Q13206 875 aaKnown RBP16.74■□□□□ 0.27
CLK4-215ENST00000611733 PMFBP1Q8TBY8 1022 aa16.74■□□□□ 0.27
CLK4-215ENST00000611733 MST1RQ04912 1400 aa16.73■□□□□ 0.27
CLK4-215ENST00000611733 DCCP43146 1447 aa16.73■□□□□ 0.27
CLK4-215ENST00000611733 ESCO1Q5FWF5 840 aa16.72■□□□□ 0.27
CLK4-215ENST00000611733 SLAIN2Q9P270 581 aa16.72■□□□□ 0.27
CLK4-215ENST00000611733 C1orf167Q5SNV9 1468 aa16.72■□□□□ 0.27
CLK4-215ENST00000611733 RGPD8O14715 1765 aaPredicted RBP16.72■□□□□ 0.27
CLK4-215ENST00000611733 ATAD2Q6PL18 1390 aa16.71■□□□□ 0.27
CLK4-215ENST00000611733 PPIP5K1Q6PFW1 1433 aa16.71■□□□□ 0.27
CLK4-215ENST00000611733 PANK3Q9H999 370 aa16.7■□□□□ 0.26
CLK4-215ENST00000611733 ANKARQ7Z5J8 1434 aa16.69■□□□□ 0.26
CLK4-215ENST00000611733 DDX17Q92841 729 aaKnown RBP16.69■□□□□ 0.26
CLK4-215ENST00000611733 PHF8Q9UPP1 1060 aa16.69■□□□□ 0.26
CLK4-215ENST00000611733 PLEKHG3A1L390 1219 aa16.68■□□□□ 0.26
CLK4-215ENST00000611733 ACEP12821 1306 aa16.68■□□□□ 0.26
CLK4-215ENST00000611733 MYOM1P52179 1685 aa16.68■□□□□ 0.26
CLK4-215ENST00000611733 BRINP3Q76B58 766 aa16.67■□□□□ 0.26
CLK4-215ENST00000611733 CARD14Q9BXL6 1004 aa16.67■□□□□ 0.26
CLK4-215ENST00000611733 CD163L1Q9NR16 1453 aa16.67■□□□□ 0.26
CLK4-215ENST00000611733 UBAP1LF5GYI3 381 aa16.67■□□□□ 0.26
CLK4-215ENST00000611733 FOXO3O43524 673 aa16.66■□□□□ 0.26
CLK4-215ENST00000611733 NGDNQ8NEJ9 315 aaKnown RBP16.65■□□□□ 0.26
CLK4-215ENST00000611733 TOPAZ1Q8N9V7 1692 aa16.65■□□□□ 0.26
CLK4-215ENST00000611733 PIP4K2BP78356 416 aa16.65■□□□□ 0.26
CLK4-215ENST00000611733 XPCQ01831 940 aaPredicted RBP16.65■□□□□ 0.26
CLK4-215ENST00000611733 A0A1W2PP64 1363 aa16.64■□□□□ 0.26
CLK4-215ENST00000611733 TOM1O60784 492 aa16.64■□□□□ 0.25
CLK4-215ENST00000611733 CPSF1Q10570 1443 aaKnown RBP16.63■□□□□ 0.25
CLK4-215ENST00000611733 PER1O15534 1290 aaPredicted RBP16.62■□□□□ 0.25
CLK4-215ENST00000611733 TERF2IPQ9NYB0 399 aa16.62■□□□□ 0.25
CLK4-215ENST00000611733 POLR3AO14802 1390 aaPredicted RBP16.62■□□□□ 0.25
CLK4-215ENST00000611733 ANKRD36BQ8N2N9 1353 aa16.62■□□□□ 0.25
CLK4-215ENST00000611733 IQSEC2Q5JU85 1478 aa16.62■□□□□ 0.25
CLK4-215ENST00000611733 HDGFL2Q7Z4V5 671 aaPredicted RBP16.62■□□□□ 0.25
CLK4-215ENST00000611733 NINLQ9Y2I6 1382 aa16.62■□□□□ 0.25
CLK4-215ENST00000611733 SCAF1Q9H7N4 1312 aaKnown RBP16.61■□□□□ 0.25
CLK4-215ENST00000611733 KTN1Q86UP2 1357 aaKnown RBP16.61■□□□□ 0.25
CLK4-215ENST00000611733 PSME1Q06323 249 aa16.6■□□□□ 0.25
CLK4-215ENST00000611733 CNGB1Q14028 1251 aaPredicted RBP16.6■□□□□ 0.25
CLK4-215ENST00000611733 ITSN1Q15811 1721 aa16.6■□□□□ 0.25
CLK4-215ENST00000611733 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.6■□□□□ 0.25
CLK4-215ENST00000611733 ZNF692Q9BU19 519 aaPredicted RBP16.6■□□□□ 0.25
CLK4-215ENST00000611733 KRT28Q7Z3Y7 464 aa16.59■□□□□ 0.25
CLK4-215ENST00000611733 NSD3Q9BZ95 1437 aa16.58■□□□□ 0.24
CLK4-215ENST00000611733 USP6P35125 1406 aa16.57■□□□□ 0.24
CLK4-215ENST00000611733 ZRANB1Q9UGI0 708 aa16.57■□□□□ 0.24
CLK4-215ENST00000611733 ROBO1Q9Y6N7 1651 aa16.57■□□□□ 0.24
CLK4-215ENST00000611733 SSH2Q76I76 1423 aa16.56■□□□□ 0.24
CLK4-215ENST00000611733 TTC21BQ7Z4L5 1316 aa16.56■□□□□ 0.24
CLK4-215ENST00000611733 PAK3O75914 559 aaPredicted RBP16.56■□□□□ 0.24
CLK4-215ENST00000611733 KNSTRNQ9Y448 316 aa16.56■□□□□ 0.24
CLK4-215ENST00000611733 AKAP12Q02952 1782 aa16.55■□□□□ 0.24
CLK4-215ENST00000611733 NPHP3Q7Z494 1330 aa16.55■□□□□ 0.24
CLK4-215ENST00000611733 NME9Q86XW9 330 aa16.55■□□□□ 0.24
CLK4-215ENST00000611733 KIF1AQ12756 1690 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms