RNA–Protein interactions for RNA: ENST00000611625.4

CDH1-212, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 4,878 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-212ENST00000611625 OSCARQ8IYS5 282 aa15.27■□□□□ 0.04
CDH1-212ENST00000611625 NOB1Q9ULX3 412 aaKnown RBP15.27■□□□□ 0.04
CDH1-212ENST00000611625 CTTNBP2Q8WZ74 1663 aa15.27■□□□□ 0.04
CDH1-212ENST00000611625 TRAK2O60296 914 aa15.27■□□□□ 0.03
CDH1-212ENST00000611625 FOXD4L6Q3SYB3 417 aaPredicted RBP15.27■□□□□ 0.03
CDH1-212ENST00000611625 FOXD4L3Q6VB84 417 aaPredicted RBP15.27■□□□□ 0.03
CDH1-212ENST00000611625 RALGAPBQ86X10 1494 aa15.27■□□□□ 0.03
CDH1-212ENST00000611625 ATF7IPQ6VMQ6 1270 aa15.27■□□□□ 0.03
CDH1-212ENST00000611625 NSD3Q9BZ95 1437 aa15.26■□□□□ 0.03
CDH1-212ENST00000611625 MRE11P49959 708 aa15.26■□□□□ 0.03
CDH1-212ENST00000611625 DUSP27Q5VZP5 1158 aa15.26■□□□□ 0.03
CDH1-212ENST00000611625 ZNF608Q9ULD9 1512 aaPredicted RBP15.26■□□□□ 0.03
CDH1-212ENST00000611625 PRAM1Q96QH2 718 aa15.26■□□□□ 0.03
CDH1-212ENST00000611625 ARID3AQ99856 593 aa15.26■□□□□ 0.03
CDH1-212ENST00000611625 CSB-PGBD3P0DP91 1061 aa15.26■□□□□ 0.03
CDH1-212ENST00000611625 DISP3Q9P2K9 1392 aa15.25■□□□□ 0.03
CDH1-212ENST00000611625 FKBP5Q13451 457 aaPredicted RBP15.25■□□□□ 0.03
CDH1-212ENST00000611625 HSP90AA2PQ14568 343 aaPredicted RBP15.25■□□□□ 0.03
CDH1-212ENST00000611625 ANO2Q9NQ90 1003 aa15.25■□□□□ 0.03
CDH1-212ENST00000611625 NKTRP30414 1462 aaKnown RBP15.24■□□□□ 0.03
CDH1-212ENST00000611625 ATP6V1DQ9Y5K8 247 aa15.24■□□□□ 0.03
CDH1-212ENST00000611625 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.23■□□□□ 0.03
CDH1-212ENST00000611625 NECTIN2Q92692 538 aa15.23■□□□□ 0.03
CDH1-212ENST00000611625 GCC1Q96CN9 775 aa15.23■□□□□ 0.03
CDH1-212ENST00000611625 TSPYL4Q9UJ04 414 aa15.23■□□□□ 0.03
CDH1-212ENST00000611625 HSP90B1P14625 803 aaKnown RBP15.23■□□□□ 0.03
CDH1-212ENST00000611625 C1orf115Q9H7X2 142 aa15.23■□□□□ 0.03
CDH1-212ENST00000611625 TWISTNBQ3B726 338 aaPredicted RBP15.22■□□□□ 0.03
CDH1-212ENST00000611625 NUP153P49790 1475 aaKnown RBP15.22■□□□□ 0.03
CDH1-212ENST00000611625 MCTP1Q6DN14 999 aa15.22■□□□□ 0.03
CDH1-212ENST00000611625 DIAPH3Q9NSV4 1193 aa15.22■□□□□ 0.03
CDH1-212ENST00000611625 TEFQ10587 303 aa15.22■□□□□ 0.03
CDH1-212ENST00000611625 CYB5RLQ6IPT4 315 aa15.22■□□□□ 0.03
CDH1-212ENST00000611625 CHMP3Q9Y3E7 222 aa15.22■□□□□ 0.03
CDH1-212ENST00000611625 RPGRIP1LQ68CZ1 1315 aa15.22■□□□□ 0.03
CDH1-212ENST00000611625 GNL2Q13823 731 aaKnown RBP15.21■□□□□ 0.03
CDH1-212ENST00000611625 LRPPRCP42704 1394 aaKnown RBP15.21■□□□□ 0.03
CDH1-212ENST00000611625 EIF2S2P20042 333 aaKnown RBP15.21■□□□□ 0.03
CDH1-212ENST00000611625 RARSP54136 660 aaKnown RBP15.21■□□□□ 0.03
CDH1-212ENST00000611625 RAPGEF6Q8TEU7 1601 aa15.21■□□□□ 0.03
CDH1-212ENST00000611625 CABP1Q9NZU7 370 aa15.2■□□□□ 0.02
CDH1-212ENST00000611625 RUFY2Q8WXA3 655 aa15.19■□□□□ 0.02
CDH1-212ENST00000611625 SLC52A1Q9NWF4 448 aa15.19■□□□□ 0.02
CDH1-212ENST00000611625 SCAF11Q99590 1463 aaKnown RBP15.19■□□□□ 0.02
CDH1-212ENST00000611625 ZNF330Q9Y3S2 320 aaPredicted RBP15.19■□□□□ 0.02
CDH1-212ENST00000611625 TRHP20396 242 aaPredicted RBP15.19■□□□□ 0.02
CDH1-212ENST00000611625 GORABQ5T7V8 394 aa15.19■□□□□ 0.02
CDH1-212ENST00000611625 PARD3Q8TEW0 1356 aa15.19■□□□□ 0.02
CDH1-212ENST00000611625 TMPOP42166 694 aaKnown RBP15.18■□□□□ 0.02
CDH1-212ENST00000611625 CDK19Q9BWU1 502 aa15.18■□□□□ 0.02
CDH1-212ENST00000611625 CDK11BP21127 795 aaKnown RBP15.18■□□□□ 0.02
CDH1-212ENST00000611625 ATAD2Q6PL18 1390 aa15.18■□□□□ 0.02
CDH1-212ENST00000611625 RABEP1Q15276 862 aa15.17■□□□□ 0.02
CDH1-212ENST00000611625 DHX29Q7Z478 1369 aaKnown RBP15.17■□□□□ 0.02
CDH1-212ENST00000611625 CHD1LQ86WJ1 897 aa15.17■□□□□ 0.02
CDH1-212ENST00000611625 FAM43AQ8N2R8 423 aa15.17■□□□□ 0.02
CDH1-212ENST00000611625 C9orf78Q9NZ63 289 aaPredicted RBP15.17■□□□□ 0.02
CDH1-212ENST00000611625 ADGRF5Q8IZF2 1346 aa15.17■□□□□ 0.02
CDH1-212ENST00000611625 NASPP49321 788 aaPredicted RBP15.17■□□□□ 0.02
CDH1-212ENST00000611625 C1orf141Q5JVX7 400 aa15.17■□□□□ 0.02
CDH1-212ENST00000611625 KIF3AQ9Y496 699 aa15.16■□□□□ 0.02
CDH1-212ENST00000611625 ZKSCAN1P17029 563 aaPredicted RBP15.16■□□□□ 0.02
CDH1-212ENST00000611625 MCM4P33991 863 aa15.16■□□□□ 0.02
CDH1-212ENST00000611625 PRAG1Q86YV5 1406 aa15.16■□□□□ 0.02
CDH1-212ENST00000611625 TMEM57Q8N5G2 664 aa15.16■□□□□ 0.02
CDH1-212ENST00000611625 WDR62O43379 1518 aa15.16■□□□□ 0.02
CDH1-212ENST00000611625 ITSN2Q9NZM3 1697 aa15.15■□□□□ 0.02
CDH1-212ENST00000611625 FAM69CQ0P6D2 419 aa15.15■□□□□ 0.02
CDH1-212ENST00000611625 ZNF428Q96B54 188 aa15.15■□□□□ 0.02
CDH1-212ENST00000611625 FCHSD2O94868 740 aa15.15■□□□□ 0.02
CDH1-212ENST00000611625 IFIT2P09913 472 aaKnown RBP15.14■□□□□ 0.01
CDH1-212ENST00000611625 SSH1Q8WYL5 1049 aa15.14■□□□□ 0.01
CDH1-212ENST00000611625 GNAI3P08754 354 aa15.13■□□□□ 0.01
CDH1-212ENST00000611625 FAM135AQ9P2D6 1515 aa15.13■□□□□ 0.01
CDH1-212ENST00000611625 TAF7LQ5H9L4 462 aa15.13■□□□□ 0.01
CDH1-212ENST00000611625 H3BQV1 296 aa15.13■□□□□ 0.01
CDH1-212ENST00000611625 K7ELQ4 463 aaPredicted RBP15.13■□□□□ 0.01
CDH1-212ENST00000611625 UBTFL1P0CB47 393 aaPredicted RBP15.13■□□□□ 0.01
CDH1-212ENST00000611625 HSP90AB4PQ58FF6 505 aa15.13■□□□□ 0.01
CDH1-212ENST00000611625 AMER1Q5JTC6 1135 aaPredicted RBP15.13■□□□□ 0.01
CDH1-212ENST00000611625 IFFO2Q5TF58 517 aa15.13■□□□□ 0.01
CDH1-212ENST00000611625 ATP10BO94823 1461 aa15.13■□□□□ 0.01
CDH1-212ENST00000611625 TPM4P67936 248 aa15.12■□□□□ 0.01
CDH1-212ENST00000611625 CAVIN1Q6NZI2 390 aaKnown RBP15.12■□□□□ 0.01
CDH1-212ENST00000611625 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.12■□□□□ 0.01
CDH1-212ENST00000611625 SMC3Q9UQE7 1217 aa15.12■□□□□ 0.01
CDH1-212ENST00000611625 NEK4P51957 841 aa15.12■□□□□ 0.01
CDH1-212ENST00000611625 NEXNQ0ZGT2 675 aa15.12■□□□□ 0.01
CDH1-212ENST00000611625 SULT6B1Q6IMI4 303 aa15.12■□□□□ 0.01
CDH1-212ENST00000611625 RAPGEF3O95398 923 aa15.12■□□□□ 0.01
CDH1-212ENST00000611625 FAM184AQ8NB25 1140 aa15.12■□□□□ 0.01
CDH1-212ENST00000611625 ISY1Q9ULR0 285 aaKnown RBP15.11■□□□□ 0.01
CDH1-212ENST00000611625 CIZ1Q9ULV3 898 aaPredicted RBP15.11■□□□□ 0.01
CDH1-212ENST00000611625 GPRASP1Q5JY77 1395 aa15.11■□□□□ 0.01
CDH1-212ENST00000611625 PZPP20742 1482 aa15.11■□□□□ 0.01
CDH1-212ENST00000611625 TXNDC2Q86VQ3 553 aa15.11■□□□□ 0.01
CDH1-212ENST00000611625 TESK2Q96S53 571 aa15.11■□□□□ 0.01
CDH1-212ENST00000611625 TEX14Q8IWB6 1497 aa15.1■□□□□ 0.01
CDH1-212ENST00000611625 ABCC11Q96J66 1382 aa15.1■□□□□ 0.01
CDH1-212ENST00000611625 NFE2L2Q16236 605 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms