RNA–Protein interactions for RNA: ENST00000611468.1

MECP2-212, Transcript of methyl-CpG binding protein 2, humanhuman

TSL 5 BASIC

Gene MECP2, Length 603 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2-212ENST00000611468 PUS7Q96PZ0 661 aaKnown RBP15.43■□□□□ 0.06
MECP2-212ENST00000611468 CABP2Q9NPB3 220 aa15.43■□□□□ 0.06
MECP2-212ENST00000611468 PTCH1Q13635 1447 aa15.43■□□□□ 0.06
MECP2-212ENST00000611468 WASLO00401 505 aaPredicted RBP15.42■□□□□ 0.06
MECP2-212ENST00000611468 ZNF335Q9H4Z2 1342 aaPredicted RBP15.42■□□□□ 0.06
MECP2-212ENST00000611468 STRCQ7RTU9 1775 aa15.41■□□□□ 0.06
MECP2-212ENST00000611468 SRPK2P78362 688 aaKnown RBP15.41■□□□□ 0.06
MECP2-212ENST00000611468 POLR1AO95602 1720 aaPredicted RBP15.4■□□□□ 0.06
MECP2-212ENST00000611468 CPS1P31327 1500 aa15.39■□□□□ 0.05
MECP2-212ENST00000611468 DIEXFQ68CQ4 756 aaKnown RBP15.39■□□□□ 0.05
MECP2-212ENST00000611468 SLC12A5Q9H2X9 1139 aa15.38■□□□□ 0.05
MECP2-212ENST00000611468 ARHGEF28Q8N1W1 1705 aaKnown RBP15.37■□□□□ 0.05
MECP2-212ENST00000611468 C14orf37Q86TY3 774 aa15.37■□□□□ 0.05
MECP2-212ENST00000611468 XRN1Q8IZH2 1706 aaKnown RBP15.37■□□□□ 0.05
MECP2-212ENST00000611468 TMC1Q8TDI8 760 aa15.36■□□□□ 0.05
MECP2-212ENST00000611468 NUDT16Q96DE0 195 aaKnown RBP15.36■□□□□ 0.05
MECP2-212ENST00000611468 PANK3Q9H999 370 aa15.36■□□□□ 0.05
MECP2-212ENST00000611468 TMEM94Q12767 1356 aa15.36■□□□□ 0.05
MECP2-212ENST00000611468 TULP4Q9NRJ4 1543 aa15.35■□□□□ 0.05
MECP2-212ENST00000611468 NUTM2FA1L443 756 aa15.35■□□□□ 0.05
MECP2-212ENST00000611468 C19orf44Q9H6X5 657 aa15.35■□□□□ 0.05
MECP2-212ENST00000611468 CABP1Q9NZU7 370 aa15.34■□□□□ 0.05
MECP2-212ENST00000611468 CCDC61Q9Y6R9 512 aa15.34■□□□□ 0.05
MECP2-212ENST00000611468 PRR36Q9H6K5 1346 aa15.34■□□□□ 0.05
MECP2-212ENST00000611468 KNDC1Q76NI1 1749 aa15.34■□□□□ 0.05
MECP2-212ENST00000611468 CHD2O14647 1828 aaKnown RBP15.33■□□□□ 0.05
MECP2-212ENST00000611468 NWD1Q149M9 1564 aa15.33■□□□□ 0.05
MECP2-212ENST00000611468 NKTRP30414 1462 aaKnown RBP15.33■□□□□ 0.04
MECP2-212ENST00000611468 QRICH2Q9H0J4 1663 aa15.32■□□□□ 0.04
MECP2-212ENST00000611468 PER1O15534 1290 aaPredicted RBP15.32■□□□□ 0.04
MECP2-212ENST00000611468 ATAD2Q6PL18 1390 aa15.32■□□□□ 0.04
MECP2-212ENST00000611468 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.31■□□□□ 0.04
MECP2-212ENST00000611468 CARD14Q9BXL6 1004 aa15.31■□□□□ 0.04
MECP2-212ENST00000611468 ADGRL3Q9HAR2 1447 aa15.31■□□□□ 0.04
MECP2-212ENST00000611468 NCOA3Q9Y6Q9 1424 aa15.31■□□□□ 0.04
MECP2-212ENST00000611468 PLEKHG3A1L390 1219 aa15.29■□□□□ 0.04
MECP2-212ENST00000611468 LRRC7Q96NW7 1537 aa15.28■□□□□ 0.04
MECP2-212ENST00000611468 ATF3P18847 181 aa15.28■□□□□ 0.04
MECP2-212ENST00000611468 TERF2IPQ9NYB0 399 aa15.27■□□□□ 0.04
MECP2-212ENST00000611468 NINLQ9Y2I6 1382 aa15.26■□□□□ 0.03
MECP2-212ENST00000611468 CADPS2Q86UW7 1296 aa15.26■□□□□ 0.03
MECP2-212ENST00000611468 STRCP1A6NGW2 1772 aa15.26■□□□□ 0.03
MECP2-212ENST00000611468 ADGRB2O60241 1585 aa15.25■□□□□ 0.03
MECP2-212ENST00000611468 PMFBP1Q8TBY8 1022 aa15.25■□□□□ 0.03
MECP2-212ENST00000611468 KNSTRNQ9Y448 316 aa15.25■□□□□ 0.03
MECP2-212ENST00000611468 PPIP5K1Q6PFW1 1433 aa15.25■□□□□ 0.03
MECP2-212ENST00000611468 MSH6P52701 1360 aa15.24■□□□□ 0.03
MECP2-212ENST00000611468 ESCO1Q5FWF5 840 aa15.24■□□□□ 0.03
MECP2-212ENST00000611468 HDGFL2Q7Z4V5 671 aaPredicted RBP15.24■□□□□ 0.03
MECP2-212ENST00000611468 ORAI2Q96SN7 254 aa15.24■□□□□ 0.03
MECP2-212ENST00000611468 ATP7BP35670 1465 aa15.24■□□□□ 0.03
MECP2-212ENST00000611468 ANKRD36BQ8N2N9 1353 aa15.24■□□□□ 0.03
MECP2-212ENST00000611468 ACEP12821 1306 aa15.23■□□□□ 0.03
MECP2-212ENST00000611468 AMER1Q5JTC6 1135 aaPredicted RBP15.23■□□□□ 0.03
MECP2-212ENST00000611468 MIER1Q8N108 512 aa15.23■□□□□ 0.03
MECP2-212ENST00000611468 ZNF692Q9BU19 519 aaPredicted RBP15.23■□□□□ 0.03
MECP2-212ENST00000611468 PHF8Q9UPP1 1060 aa15.23■□□□□ 0.03
MECP2-212ENST00000611468 ANKARQ7Z5J8 1434 aa15.23■□□□□ 0.03
MECP2-212ENST00000611468 CNGB1Q14028 1251 aaPredicted RBP15.22■□□□□ 0.03
MECP2-212ENST00000611468 NGDNQ8NEJ9 315 aaKnown RBP15.22■□□□□ 0.03
MECP2-212ENST00000611468 A0A1W2PP64 1363 aa15.22■□□□□ 0.03
MECP2-212ENST00000611468 CD163L1Q9NR16 1453 aa15.21■□□□□ 0.03
MECP2-212ENST00000611468 ANP32CO43423 234 aa15.21■□□□□ 0.03
MECP2-212ENST00000611468 SLAIN2Q9P270 581 aa15.21■□□□□ 0.03
MECP2-212ENST00000611468 LTBP4Q8N2S1 1624 aa15.21■□□□□ 0.02
MECP2-212ENST00000611468 DCCP43146 1447 aa15.2■□□□□ 0.02
MECP2-212ENST00000611468 CPSF1Q10570 1443 aaKnown RBP15.2■□□□□ 0.02
MECP2-212ENST00000611468 CC2D1BQ5T0F9 858 aaKnown RBP15.2■□□□□ 0.02
MECP2-212ENST00000611468 C1orf167Q5SNV9 1468 aa15.2■□□□□ 0.02
MECP2-212ENST00000611468 CDC42BPGQ6DT37 1551 aa15.19■□□□□ 0.02
MECP2-212ENST00000611468 PRKRIP1Q9H875 184 aaPredicted RBP15.19■□□□□ 0.02
MECP2-212ENST00000611468 MST1RQ04912 1400 aa15.18■□□□□ 0.02
MECP2-212ENST00000611468 NSD3Q9BZ95 1437 aa15.18■□□□□ 0.02
MECP2-212ENST00000611468 POLR3AO14802 1390 aaPredicted RBP15.18■□□□□ 0.02
MECP2-212ENST00000611468 KTN1Q86UP2 1357 aaKnown RBP15.18■□□□□ 0.02
MECP2-212ENST00000611468 NALCNQ8IZF0 1738 aa15.17■□□□□ 0.02
MECP2-212ENST00000611468 FYB1O15117 783 aa15.17■□□□□ 0.02
MECP2-212ENST00000611468 FOXO3O43524 673 aa15.17■□□□□ 0.02
MECP2-212ENST00000611468 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.17■□□□□ 0.025e-7■■■■□ 20.4
MECP2-212ENST00000611468 PSME1Q06323 249 aa15.16■□□□□ 0.02
MECP2-212ENST00000611468 CGNL1Q0VF96 1302 aa15.16■□□□□ 0.02
MECP2-212ENST00000611468 TTC21BQ7Z4L5 1316 aa15.16■□□□□ 0.02
MECP2-212ENST00000611468 NPC1L1Q9UHC9 1359 aa15.15■□□□□ 0.02
MECP2-212ENST00000611468 USP32Q8NFA0 1604 aa15.15■□□□□ 0.02
MECP2-212ENST00000611468 BRINP3Q76B58 766 aa15.15■□□□□ 0.02
MECP2-212ENST00000611468 MYOM1P52179 1685 aa15.14■□□□□ 0.01
MECP2-212ENST00000611468 RALBP1Q15311 655 aa15.14■□□□□ 0.01
MECP2-212ENST00000611468 NME9Q86XW9 330 aa15.14■□□□□ 0.01
MECP2-212ENST00000611468 GGNBP2Q9H3C7 697 aa15.14■□□□□ 0.01
MECP2-212ENST00000611468 FMN2Q9NZ56 1722 aa15.14■□□□□ 0.01
MECP2-212ENST00000611468 XPCQ01831 940 aaPredicted RBP15.13■□□□□ 0.01
MECP2-212ENST00000611468 SSH2Q76I76 1423 aa15.13■□□□□ 0.01
MECP2-212ENST00000611468 KRT28Q7Z3Y7 464 aa15.13■□□□□ 0.01
MECP2-212ENST00000611468 DDX17Q92841 729 aaKnown RBP15.13■□□□□ 0.01
MECP2-212ENST00000611468 ZRANB1Q9UGI0 708 aa15.13■□□□□ 0.01
MECP2-212ENST00000611468 USP6P35125 1406 aa15.12■□□□□ 0.01
MECP2-212ENST00000611468 EDC4Q6P2E9 1401 aaKnown RBP15.12■□□□□ 0.01
MECP2-212ENST00000611468 MORC1Q86VD1 984 aa15.12■□□□□ 0.01
MECP2-212ENST00000611468 CERKQ8TCT0 537 aa15.12■□□□□ 0.01
MECP2-212ENST00000611468 PARD3Q8TEW0 1356 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms