RNA–Protein interactions for RNA: ENST00000611468.1

MECP2-212, Transcript of methyl-CpG binding protein 2, humanhuman

TSL 5 BASIC

Gene MECP2, Length 603 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2-212ENST00000611468 NISCHQ9Y2I1 1504 aa25.85■■□□□ 1.73
MECP2-212ENST00000611468 CCDC180Q9P1Z9 1646 aa22.54■■□□□ 1.2
MECP2-212ENST00000611468 ABCC9O60706 1549 aa21.82■■□□□ 1.08
MECP2-212ENST00000611468 DCAF8L2P0C7V8 631 aa21.61■■□□□ 1.05
MECP2-212ENST00000611468 ZCCHC6Q5VYS8 1495 aaKnown RBP21.6■■□□□ 1.05
MECP2-212ENST00000611468 DCAF1Q9Y4B6 1507 aa21.34■■□□□ 1.01
MECP2-212ENST00000611468 MYO15BQ96JP2 1530 aa21.24■□□□□ 0.99
MECP2-212ENST00000611468 NACADO15069 1562 aa21.2■□□□□ 0.98
MECP2-212ENST00000611468 RB1CC1Q8TDY2 1594 aa21.07■□□□□ 0.96
MECP2-212ENST00000611468 SHROOM4Q9ULL8 1493 aa20.88■□□□□ 0.93
MECP2-212ENST00000611468 SCRIBQ14160 1630 aa20.75■□□□□ 0.91
MECP2-212ENST00000611468 PABPN1Q86U42 306 aaKnown RBP eCLIP20.62■□□□□ 0.89
MECP2-212ENST00000611468 BICRAQ9NZM4 1560 aa20.46■□□□□ 0.87
MECP2-212ENST00000611468 UNC13AQ9UPW8 1703 aa20.46■□□□□ 0.87
MECP2-212ENST00000611468 CECR2Q9BXF3 1484 aa20.16■□□□□ 0.82
MECP2-212ENST00000611468 RSF1Q96T23 1441 aaPredicted RBP19.97■□□□□ 0.79
MECP2-212ENST00000611468 SUPT5HO00267 1087 aaKnown RBP19.97■□□□□ 0.79
MECP2-212ENST00000611468 MROH2BQ7Z745 1585 aa19.95■□□□□ 0.78
MECP2-212ENST00000611468 BAZ1AQ9NRL2 1556 aaPredicted RBP19.94■□□□□ 0.78
MECP2-212ENST00000611468 EIF4G1Q04637 1599 aaKnown RBP19.87■□□□□ 0.77
MECP2-212ENST00000611468 SMARCA4P51532 1647 aa19.86■□□□□ 0.77
MECP2-212ENST00000611468 ATAD2BQ9ULI0 1458 aa19.74■□□□□ 0.75
MECP2-212ENST00000611468 DNAJC5BQ9UF47 199 aa19.73■□□□□ 0.75
MECP2-212ENST00000611468 WIZO95785 1651 aa19.69■□□□□ 0.74
MECP2-212ENST00000611468 NCAPD3P42695 1498 aa19.66■□□□□ 0.74
MECP2-212ENST00000611468 PEG3Q9GZU2 1588 aa19.66■□□□□ 0.74
MECP2-212ENST00000611468 CC2D2AQ9P2K1 1620 aa19.65■□□□□ 0.74
MECP2-212ENST00000611468 SMARCA2P51531 1590 aa19.65■□□□□ 0.74
MECP2-212ENST00000611468 BAZ1BQ9UIG0 1483 aaKnown RBP19.56■□□□□ 0.72
MECP2-212ENST00000611468 TOP2AP11388 1531 aaKnown RBP19.51■□□□□ 0.71
MECP2-212ENST00000611468 HMGXB3Q12766 1538 aa19.48■□□□□ 0.71
MECP2-212ENST00000611468 CCDC88BA6NC98 1476 aa19.39■□□□□ 0.69
MECP2-212ENST00000611468 CADPSQ9ULU8 1353 aa19.16■□□□□ 0.66
MECP2-212ENST00000611468 CFTRP13569 1480 aa19.09■□□□□ 0.65
MECP2-212ENST00000611468 NESP48681 1621 aa19.03■□□□□ 0.64
MECP2-212ENST00000611468 CHIC1Q5VXU3 224 aa18.95■□□□□ 0.62
MECP2-212ENST00000611468 LAMC3Q9Y6N6 1575 aa18.93■□□□□ 0.62
MECP2-212ENST00000611468 PDS5BQ9NTI5 1447 aa18.91■□□□□ 0.62
MECP2-212ENST00000611468 FANCD2Q9BXW9 1451 aa18.87■□□□□ 0.61
MECP2-212ENST00000611468 TRIM41Q8WV44 630 aa18.81■□□□□ 0.6
MECP2-212ENST00000611468 ABCC8Q09428 1581 aa18.78■□□□□ 0.6
MECP2-212ENST00000611468 WRNQ14191 1432 aaPredicted RBP eCLIP18.77■□□□□ 0.6
MECP2-212ENST00000611468 CEP164Q9UPV0 1460 aa18.76■□□□□ 0.59
MECP2-212ENST00000611468 ERCC6Q03468 1493 aa18.72■□□□□ 0.59
MECP2-212ENST00000611468 PRDM2Q13029 1718 aa18.67■□□□□ 0.58
MECP2-212ENST00000611468 CUX1P39880 1505 aa18.67■□□□□ 0.58
MECP2-212ENST00000611468 URB2Q14146 1524 aaKnown RBP18.65■□□□□ 0.58
MECP2-212ENST00000611468 MRC2Q9UBG0 1479 aa18.64■□□□□ 0.57
MECP2-212ENST00000611468 SYNJ1O43426 1573 aa18.63■□□□□ 0.57
MECP2-212ENST00000611468 KIF21AQ7Z4S6 1674 aa18.63■□□□□ 0.57
MECP2-212ENST00000611468 TOPBP1Q92547 1522 aa18.61■□□□□ 0.57
MECP2-212ENST00000611468 TOP2BQ02880 1626 aa18.57■□□□□ 0.56
MECP2-212ENST00000611468 DNMBPQ6XZF7 1577 aa18.57■□□□□ 0.56
MECP2-212ENST00000611468 FGD5Q6ZNL6 1462 aa18.52■□□□□ 0.56
MECP2-212ENST00000611468 WDR62O43379 1518 aa18.51■□□□□ 0.55
MECP2-212ENST00000611468 SOGA1O94964 1423 aa18.5■□□□□ 0.55
MECP2-212ENST00000611468 BIVM-ERCC5R4GMW8 1640 aa18.5■□□□□ 0.55
MECP2-212ENST00000611468 POLA1P09884 1462 aaPredicted RBP18.5■□□□□ 0.55
MECP2-212ENST00000611468 THOC2Q8NI27 1593 aaKnown RBP18.47■□□□□ 0.55
MECP2-212ENST00000611468 RAD54L2Q9Y4B4 1467 aa18.47■□□□□ 0.55
MECP2-212ENST00000611468 FAM9AQ8IZU1 332 aaPredicted RBP18.45■□□□□ 0.54
MECP2-212ENST00000611468 CUX2O14529 1486 aa18.44■□□□□ 0.54
MECP2-212ENST00000611468 RUSC2Q8N2Y8 1516 aa18.4■□□□□ 0.54
MECP2-212ENST00000611468 TDRD9Q8NDG6 1382 aaKnown RBP18.38■□□□□ 0.53
MECP2-212ENST00000611468 ABCA10Q8WWZ4 1543 aa18.36■□□□□ 0.53
MECP2-212ENST00000611468 IFT140Q96RY7 1462 aa18.36■□□□□ 0.53
MECP2-212ENST00000611468 KIF27Q86VH2 1401 aa18.35■□□□□ 0.53
MECP2-212ENST00000611468 CSRNP3Q8WYN3 585 aa18.35■□□□□ 0.53
MECP2-212ENST00000611468 TARBP1Q13395 1621 aaKnown RBP18.31■□□□□ 0.52
MECP2-212ENST00000611468 IGF1RP08069 1367 aa18.3■□□□□ 0.52
MECP2-212ENST00000611468 AQRO60306 1485 aaKnown RBP eCLIP18.3■□□□□ 0.52
MECP2-212ENST00000611468 EEA1Q15075 1411 aa18.3■□□□□ 0.52
MECP2-212ENST00000611468 ZNF608Q9ULD9 1512 aaPredicted RBP18.29■□□□□ 0.52
MECP2-212ENST00000611468 GAPVD1Q14C86 1478 aa18.25■□□□□ 0.51
MECP2-212ENST00000611468 LOC105371045A0A1W2PR82 267 aa18.24■□□□□ 0.51
MECP2-212ENST00000611468 EHMT2Q96KQ7 1210 aa18.2■□□□□ 0.5
MECP2-212ENST00000611468 CARMIL1Q5VZK9 1371 aa18.17■□□□□ 0.5
MECP2-212ENST00000611468 WDR97A6NE52 1622 aa18.16■□□□□ 0.5
MECP2-212ENST00000611468 GRIN2BQ13224 1484 aa18.15■□□□□ 0.5
MECP2-212ENST00000611468 ABCA5Q8WWZ7 1642 aa18.15■□□□□ 0.5
MECP2-212ENST00000611468 PRXQ9BXM0 1461 aa18.14■□□□□ 0.49
MECP2-212ENST00000611468 ERICH3Q5RHP9 1530 aa18.11■□□□□ 0.49
MECP2-212ENST00000611468 EIF4G3O43432 1585 aaKnown RBP18.08■□□□□ 0.49
MECP2-212ENST00000611468 UBTFP17480 764 aaKnown RBP18.07■□□□□ 0.48
MECP2-212ENST00000611468 SNAPC4Q5SXM2 1469 aa18.06■□□□□ 0.48
MECP2-212ENST00000611468 RAPGEF2Q9Y4G8 1499 aa18.06■□□□□ 0.48
MECP2-212ENST00000611468 FHAD1B1AJZ9 1412 aa18.06■□□□□ 0.48
MECP2-212ENST00000611468 FBLN2P98095 1184 aa18.04■□□□□ 0.48
MECP2-212ENST00000611468 CHMP7Q8WUX9 453 aaPredicted RBP18.04■□□□□ 0.48
MECP2-212ENST00000611468 GOLGA3Q08378 1498 aa18.01■□□□□ 0.47
MECP2-212ENST00000611468 MAGI1Q96QZ7 1491 aaPredicted RBP18.01■□□□□ 0.47
MECP2-212ENST00000611468 KIF21BO75037 1637 aa17.98■□□□□ 0.47
MECP2-212ENST00000611468 SYNJ2O15056 1496 aa17.96■□□□□ 0.47
MECP2-212ENST00000611468 TNIKQ9UKE5 1360 aa17.96■□□□□ 0.47
MECP2-212ENST00000611468 CUL7Q14999 1698 aa17.96■□□□□ 0.47
MECP2-212ENST00000611468 PBRM1Q86U86 1689 aa17.96■□□□□ 0.47
MECP2-212ENST00000611468 ADAMTS12P58397 1594 aa17.95■□□□□ 0.46
MECP2-212ENST00000611468 GRIN2AQ12879 1464 aa17.91■□□□□ 0.46
MECP2-212ENST00000611468 RANGAP1P46060 587 aaPredicted RBP17.88■□□□□ 0.45
MECP2-212ENST00000611468 NUP160Q12769 1436 aa17.83■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms