RNA–Protein interactions for RNA: ENST00000610970.1

HOXA4-204, Transcript of homeobox A4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA4, Length 1,728 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA4-204ENST00000610970 CGNL1Q0VF96 1302 aa31.41■■■□□ 2.62
HOXA4-204ENST00000610970 SPATA31D1Q6ZQQ2 1576 aa31.41■■■□□ 2.62
HOXA4-204ENST00000610970 GOLGA2Q08379 1002 aa31.41■■■□□ 2.62
HOXA4-204ENST00000610970 NUTM2DQ5VT03 806 aaPredicted RBP31.4■■■□□ 2.62
HOXA4-204ENST00000610970 MORC1Q86VD1 984 aa31.4■■■□□ 2.62
HOXA4-204ENST00000610970 CLTCQ00610 1675 aaKnown RBP31.39■■■□□ 2.62
HOXA4-204ENST00000610970 FANCIQ9NVI1 1328 aa31.37■■■□□ 2.61
HOXA4-204ENST00000610970 PTPRMP28827 1452 aa31.36■■■□□ 2.61
HOXA4-204ENST00000610970 FBXO31Q5XUX0 539 aaPredicted RBP31.35■■■□□ 2.61
HOXA4-204ENST00000610970 YTHDC2Q9H6S0 1430 aaKnown RBP31.35■■■□□ 2.61
HOXA4-204ENST00000610970 ALKQ9UM73 1620 aa31.35■■■□□ 2.61
HOXA4-204ENST00000610970 DUSP27Q5VZP5 1158 aa31.34■■■□□ 2.61
HOXA4-204ENST00000610970 KDM4FA0A1W2PPD8 638 aa31.32■■■□□ 2.61
HOXA4-204ENST00000610970 ATAD2Q6PL18 1390 aa31.32■■■□□ 2.6
HOXA4-204ENST00000610970 SLFN5Q08AF3 891 aa31.32■■■□□ 2.6
HOXA4-204ENST00000610970 TRMT2AQ8IZ69 625 aaKnown RBP31.32■■■□□ 2.6
HOXA4-204ENST00000610970 EXOC6Q8TAG9 804 aa31.32■■■□□ 2.6
HOXA4-204ENST00000610970 STAG3Q9UJ98 1225 aa31.31■■■□□ 2.6
HOXA4-204ENST00000610970 A2ML1A8K2U0 1454 aa31.29■■■□□ 2.6
HOXA4-204ENST00000610970 SHPRHQ149N8 1683 aa31.29■■■□□ 2.6
HOXA4-204ENST00000610970 DLC1Q96QB1 1528 aa31.28■■■□□ 2.6
HOXA4-204ENST00000610970 CFAP53Q96M91 514 aa31.27■■■□□ 2.6
HOXA4-204ENST00000610970 APAF1O14727 1248 aa31.27■■■□□ 2.6
HOXA4-204ENST00000610970 AEBP2Q6ZN18 517 aaPredicted RBP31.27■■■□□ 2.6
HOXA4-204ENST00000610970 GOLGA6L2Q8N9W4 650 aaPredicted RBP31.25■■■□□ 2.59
HOXA4-204ENST00000610970 E9PSI1 815 aa31.24■■■□□ 2.59
HOXA4-204ENST00000610970 CCDC146Q8IYE0 955 aa31.24■■■□□ 2.59
HOXA4-204ENST00000610970 CABP2Q9NPB3 220 aa31.24■■■□□ 2.59
HOXA4-204ENST00000610970 STK26Q9P289 416 aa31.24■■■□□ 2.59
HOXA4-204ENST00000610970 NCBP3Q53F19 620 aaKnown RBP31.24■■■□□ 2.59
HOXA4-204ENST00000610970 POGKQ9P215 609 aa31.24■■■□□ 2.59
HOXA4-204ENST00000610970 ABCC11Q96J66 1382 aa31.23■■■□□ 2.59
HOXA4-204ENST00000610970 RIMS2Q9UQ26 1411 aa31.21■■■□□ 2.59
HOXA4-204ENST00000610970 TERF2IPQ9NYB0 399 aa31.21■■■□□ 2.59
HOXA4-204ENST00000610970 MED14O60244 1454 aa31.21■■■□□ 2.59
HOXA4-204ENST00000610970 SRPK2P78362 688 aaKnown RBP31.21■■■□□ 2.59
HOXA4-204ENST00000610970 PRAM1Q96QH2 718 aa31.21■■■□□ 2.59
HOXA4-204ENST00000610970 NKTRP30414 1462 aaKnown RBP31.2■■■□□ 2.59
HOXA4-204ENST00000610970 RUNDC1Q96C34 613 aa31.19■■■□□ 2.58
HOXA4-204ENST00000610970 MLECQ14165 292 aa31.18■■■□□ 2.58
HOXA4-204ENST00000610970 ABCF1Q8NE71 845 aaKnown RBP eCLIP31.18■■■□□ 2.58
HOXA4-204ENST00000610970 ANKRD26Q9UPS8 1709 aa31.18■■■□□ 2.58
HOXA4-204ENST00000610970 A0A1W2PP64 1363 aa31.18■■■□□ 2.58
HOXA4-204ENST00000610970 MTHFSP49914 203 aa31.17■■■□□ 2.58
HOXA4-204ENST00000610970 SETD1AO15047 1707 aaKnown RBP31.17■■■□□ 2.58
HOXA4-204ENST00000610970 SAFB2Q14151 953 aaKnown RBP eCLIP31.15■■■□□ 2.58
HOXA4-204ENST00000610970 ESF1Q9H501 851 aaKnown RBP31.15■■■□□ 2.58
HOXA4-204ENST00000610970 PLIN1O60240 522 aa31.13■■■□□ 2.57
HOXA4-204ENST00000610970 CRBNQ96SW2 442 aa31.13■■■□□ 2.57
HOXA4-204ENST00000610970 MINK1Q8N4C8 1332 aaPredicted RBP31.13■■■□□ 2.57
HOXA4-204ENST00000610970 IQSEC2Q5JU85 1478 aa31.13■■■□□ 2.57
HOXA4-204ENST00000610970 HDGFP51858 240 aaKnown RBP31.12■■■□□ 2.57
HOXA4-204ENST00000610970 ZMYM3Q14202 1370 aa31.12■■■□□ 2.57
HOXA4-204ENST00000610970 TCERG1O14776 1098 aaKnown RBP31.11■■■□□ 2.57
HOXA4-204ENST00000610970 TNNT2P45379 298 aaPredicted RBP31.11■■■□□ 2.57
HOXA4-204ENST00000610970 HDGFL2Q7Z4V5 671 aaPredicted RBP31.11■■■□□ 2.57
HOXA4-204ENST00000610970 CCDC27Q2M243 656 aa31.1■■■□□ 2.57
HOXA4-204ENST00000610970 WWC1Q8IX03 1113 aa31.1■■■□□ 2.57
HOXA4-204ENST00000610970 CD163L1Q9NR16 1453 aa31.1■■■□□ 2.57
HOXA4-204ENST00000610970 ANP32EQ9BTT0 268 aa31.09■■■□□ 2.57
HOXA4-204ENST00000610970 CDK19Q9BWU1 502 aa31.08■■■□□ 2.57
HOXA4-204ENST00000610970 WDR63Q8IWG1 891 aa31.07■■■□□ 2.56
HOXA4-204ENST00000610970 PHF23Q9BUL5 403 aaPredicted RBP31.07■■■□□ 2.56
HOXA4-204ENST00000610970 SIRT1Q96EB6 747 aa31.05■■■□□ 2.56
HOXA4-204ENST00000610970 ATP7BP35670 1465 aa31.04■■■□□ 2.56
HOXA4-204ENST00000610970 NRXN3Q9Y4C0 1643 aa31.04■■■□□ 2.56
HOXA4-204ENST00000610970 SPINK5Q9NQ38 1064 aaPredicted RBP31.04■■■□□ 2.56
HOXA4-204ENST00000610970 MS4A1P11836 297 aa31.04■■■□□ 2.56
HOXA4-204ENST00000610970 NLRP1Q9C000 1473 aa31.03■■■□□ 2.56
HOXA4-204ENST00000610970 TCP11L2Q8N4U5 519 aa31.03■■■□□ 2.56
HOXA4-204ENST00000610970 KNDC1Q76NI1 1749 aa31.03■■■□□ 2.56
HOXA4-204ENST00000610970 KIF20BQ96Q89 1820 aa31.02■■■□□ 2.56
HOXA4-204ENST00000610970 FYB1O15117 783 aa31.01■■■□□ 2.56
HOXA4-204ENST00000610970 TNRQ92752 1358 aa31.01■■■□□ 2.56
HOXA4-204ENST00000610970 ADGRB2O60241 1585 aa31■■■□□ 2.55
HOXA4-204ENST00000610970 C20orf194Q5TEA3 1177 aa30.99■■■□□ 2.55
HOXA4-204ENST00000610970 FAM135BQ49AJ0 1406 aa30.99■■■□□ 2.55
HOXA4-204ENST00000610970 COL3A1P02461 1466 aaPredicted RBP30.97■■■□□ 2.55
HOXA4-204ENST00000610970 TECPR2O15040 1411 aa30.97■■■□□ 2.55
HOXA4-204ENST00000610970 GGNBP2Q9H3C7 697 aa30.96■■■□□ 2.55
HOXA4-204ENST00000610970 SENP3Q9H4L4 574 aaPredicted RBP30.96■■■□□ 2.55
HOXA4-204ENST00000610970 ADAMTSL3P82987 1691 aa30.96■■■□□ 2.55
HOXA4-204ENST00000610970 CABP1Q9NZU7 370 aa30.95■■■□□ 2.55
HOXA4-204ENST00000610970 U2AF1L5P0DN76 240 aaPredicted RBP30.95■■■□□ 2.54
HOXA4-204ENST00000610970 U2AF1Q01081 240 aaKnown RBP eCLIP30.95■■■□□ 2.54
HOXA4-204ENST00000610970 DMRT2Q9Y5R5 561 aa30.95■■■□□ 2.54
HOXA4-204ENST00000610970 MSH5O43196 834 aa30.94■■■□□ 2.54
HOXA4-204ENST00000610970 CENPQQ7L2Z9 268 aaPredicted RBP30.94■■■□□ 2.54
HOXA4-204ENST00000610970 PDE3AQ14432 1141 aa30.93■■■□□ 2.54
HOXA4-204ENST00000610970 PNNQ9H307 717 aaKnown RBP30.93■■■□□ 2.54
HOXA4-204ENST00000610970 UBR1Q8IWV7 1749 aa30.93■■■□□ 2.54
HOXA4-204ENST00000610970 KDM2BQ8NHM5 1336 aa30.92■■■□□ 2.54
HOXA4-204ENST00000610970 PNPLA6Q8IY17 1366 aa30.92■■■□□ 2.54
HOXA4-204ENST00000610970 CPS1P31327 1500 aa30.91■■■□□ 2.54
HOXA4-204ENST00000610970 WAPLQ7Z5K2 1190 aa30.91■■■□□ 2.54
HOXA4-204ENST00000610970 TMEM2Q9UHN6 1383 aa30.9■■■□□ 2.54
HOXA4-204ENST00000610970 MYH16Q9H6N6 1097 aa30.9■■■□□ 2.54
HOXA4-204ENST00000610970 FER1L4A9Z1Z3 1794 aa30.89■■■□□ 2.54
HOXA4-204ENST00000610970 METP08581 1390 aa30.89■■■□□ 2.54
HOXA4-204ENST00000610970 WASLO00401 505 aaPredicted RBP30.89■■■□□ 2.54
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms