RNA–Protein interactions for RNA: ENST00000610970.1

HOXA4-204, Transcript of homeobox A4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA4, Length 1,728 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA4-204ENST00000610970 CGNL1Q0VF96 1302 aa31.41■■■□□ 2.62
HOXA4-204ENST00000610970 SPATA31D1Q6ZQQ2 1576 aa31.41■■■□□ 2.62
HOXA4-204ENST00000610970 GOLGA2Q08379 1002 aa31.41■■■□□ 2.62
HOXA4-204ENST00000610970 NUTM2DQ5VT03 806 aaPredicted RBP31.4■■■□□ 2.62
HOXA4-204ENST00000610970 MORC1Q86VD1 984 aa31.4■■■□□ 2.62
HOXA4-204ENST00000610970 CLTCQ00610 1675 aaKnown RBP31.39■■■□□ 2.62
HOXA4-204ENST00000610970 FANCIQ9NVI1 1328 aa31.37■■■□□ 2.61
HOXA4-204ENST00000610970 PTPRMP28827 1452 aa31.36■■■□□ 2.61
HOXA4-204ENST00000610970 FBXO31Q5XUX0 539 aaPredicted RBP31.35■■■□□ 2.61
HOXA4-204ENST00000610970 YTHDC2Q9H6S0 1430 aaKnown RBP31.35■■■□□ 2.61
HOXA4-204ENST00000610970 ALKQ9UM73 1620 aa31.35■■■□□ 2.61
HOXA4-204ENST00000610970 DUSP27Q5VZP5 1158 aa31.34■■■□□ 2.61
HOXA4-204ENST00000610970 KDM4FA0A1W2PPD8 638 aa31.32■■■□□ 2.61
HOXA4-204ENST00000610970 ATAD2Q6PL18 1390 aa31.32■■■□□ 2.6
HOXA4-204ENST00000610970 SLFN5Q08AF3 891 aa31.32■■■□□ 2.6
HOXA4-204ENST00000610970 TRMT2AQ8IZ69 625 aaKnown RBP31.32■■■□□ 2.6
HOXA4-204ENST00000610970 EXOC6Q8TAG9 804 aa31.32■■■□□ 2.6
HOXA4-204ENST00000610970 STAG3Q9UJ98 1225 aa31.31■■■□□ 2.6
HOXA4-204ENST00000610970 A2ML1A8K2U0 1454 aa31.29■■■□□ 2.6
HOXA4-204ENST00000610970 SHPRHQ149N8 1683 aa31.29■■■□□ 2.6
HOXA4-204ENST00000610970 DLC1Q96QB1 1528 aa31.28■■■□□ 2.6
HOXA4-204ENST00000610970 CFAP53Q96M91 514 aa31.27■■■□□ 2.6
HOXA4-204ENST00000610970 APAF1O14727 1248 aa31.27■■■□□ 2.6
HOXA4-204ENST00000610970 AEBP2Q6ZN18 517 aaPredicted RBP31.27■■■□□ 2.6
HOXA4-204ENST00000610970 GOLGA6L2Q8N9W4 650 aaPredicted RBP31.25■■■□□ 2.59
HOXA4-204ENST00000610970 E9PSI1 815 aa31.24■■■□□ 2.59
HOXA4-204ENST00000610970 CCDC146Q8IYE0 955 aa31.24■■■□□ 2.59
HOXA4-204ENST00000610970 CABP2Q9NPB3 220 aa31.24■■■□□ 2.59
HOXA4-204ENST00000610970 STK26Q9P289 416 aa31.24■■■□□ 2.59
HOXA4-204ENST00000610970 NCBP3Q53F19 620 aaKnown RBP31.24■■■□□ 2.59
HOXA4-204ENST00000610970 POGKQ9P215 609 aa31.24■■■□□ 2.59
HOXA4-204ENST00000610970 ABCC11Q96J66 1382 aa31.23■■■□□ 2.59
HOXA4-204ENST00000610970 RIMS2Q9UQ26 1411 aa31.21■■■□□ 2.59
HOXA4-204ENST00000610970 TERF2IPQ9NYB0 399 aa31.21■■■□□ 2.59
HOXA4-204ENST00000610970 MED14O60244 1454 aa31.21■■■□□ 2.59
HOXA4-204ENST00000610970 SRPK2P78362 688 aaKnown RBP31.21■■■□□ 2.59
HOXA4-204ENST00000610970 PRAM1Q96QH2 718 aa31.21■■■□□ 2.59
HOXA4-204ENST00000610970 NKTRP30414 1462 aaKnown RBP31.2■■■□□ 2.59
HOXA4-204ENST00000610970 RUNDC1Q96C34 613 aa31.19■■■□□ 2.58
HOXA4-204ENST00000610970 MLECQ14165 292 aa31.18■■■□□ 2.58
HOXA4-204ENST00000610970 ABCF1Q8NE71 845 aaKnown RBP eCLIP31.18■■■□□ 2.58
HOXA4-204ENST00000610970 ANKRD26Q9UPS8 1709 aa31.18■■■□□ 2.58
HOXA4-204ENST00000610970 A0A1W2PP64 1363 aa31.18■■■□□ 2.58
HOXA4-204ENST00000610970 MTHFSP49914 203 aa31.17■■■□□ 2.58
HOXA4-204ENST00000610970 SETD1AO15047 1707 aaKnown RBP31.17■■■□□ 2.58
HOXA4-204ENST00000610970 SAFB2Q14151 953 aaKnown RBP eCLIP31.15■■■□□ 2.58
HOXA4-204ENST00000610970 ESF1Q9H501 851 aaKnown RBP31.15■■■□□ 2.58
HOXA4-204ENST00000610970 PLIN1O60240 522 aa31.13■■■□□ 2.57
HOXA4-204ENST00000610970 CRBNQ96SW2 442 aa31.13■■■□□ 2.57
HOXA4-204ENST00000610970 MINK1Q8N4C8 1332 aaPredicted RBP31.13■■■□□ 2.57
HOXA4-204ENST00000610970 IQSEC2Q5JU85 1478 aa31.13■■■□□ 2.57
HOXA4-204ENST00000610970 HDGFP51858 240 aaKnown RBP31.12■■■□□ 2.57
HOXA4-204ENST00000610970 ZMYM3Q14202 1370 aa31.12■■■□□ 2.57
HOXA4-204ENST00000610970 TCERG1O14776 1098 aaKnown RBP31.11■■■□□ 2.57
HOXA4-204ENST00000610970 TNNT2P45379 298 aaPredicted RBP31.11■■■□□ 2.57
HOXA4-204ENST00000610970 HDGFL2Q7Z4V5 671 aaPredicted RBP31.11■■■□□ 2.57
HOXA4-204ENST00000610970 CCDC27Q2M243 656 aa31.1■■■□□ 2.57
HOXA4-204ENST00000610970 WWC1Q8IX03 1113 aa31.1■■■□□ 2.57
HOXA4-204ENST00000610970 CD163L1Q9NR16 1453 aa31.1■■■□□ 2.57
HOXA4-204ENST00000610970 ANP32EQ9BTT0 268 aa31.09■■■□□ 2.57
HOXA4-204ENST00000610970 CDK19Q9BWU1 502 aa31.08■■■□□ 2.57
HOXA4-204ENST00000610970 WDR63Q8IWG1 891 aa31.07■■■□□ 2.56
HOXA4-204ENST00000610970 PHF23Q9BUL5 403 aaPredicted RBP31.07■■■□□ 2.56
HOXA4-204ENST00000610970 SIRT1Q96EB6 747 aa31.05■■■□□ 2.56
HOXA4-204ENST00000610970 ATP7BP35670 1465 aa31.04■■■□□ 2.56
HOXA4-204ENST00000610970 NRXN3Q9Y4C0 1643 aa31.04■■■□□ 2.56
HOXA4-204ENST00000610970 SPINK5Q9NQ38 1064 aaPredicted RBP31.04■■■□□ 2.56
HOXA4-204ENST00000610970 MS4A1P11836 297 aa31.04■■■□□ 2.56
HOXA4-204ENST00000610970 NLRP1Q9C000 1473 aa31.03■■■□□ 2.56
HOXA4-204ENST00000610970 TCP11L2Q8N4U5 519 aa31.03■■■□□ 2.56
HOXA4-204ENST00000610970 KNDC1Q76NI1 1749 aa31.03■■■□□ 2.56
HOXA4-204ENST00000610970 KIF20BQ96Q89 1820 aa31.02■■■□□ 2.56
HOXA4-204ENST00000610970 FYB1O15117 783 aa31.01■■■□□ 2.56
HOXA4-204ENST00000610970 TNRQ92752 1358 aa31.01■■■□□ 2.56
HOXA4-204ENST00000610970 ADGRB2O60241 1585 aa31■■■□□ 2.55
HOXA4-204ENST00000610970 C20orf194Q5TEA3 1177 aa30.99■■■□□ 2.55
HOXA4-204ENST00000610970 FAM135BQ49AJ0 1406 aa30.99■■■□□ 2.55
HOXA4-204ENST00000610970 COL3A1P02461 1466 aaPredicted RBP30.97■■■□□ 2.55
HOXA4-204ENST00000610970 TECPR2O15040 1411 aa30.97■■■□□ 2.55
HOXA4-204ENST00000610970 GGNBP2Q9H3C7 697 aa30.96■■■□□ 2.55
HOXA4-204ENST00000610970 SENP3Q9H4L4 574 aaPredicted RBP30.96■■■□□ 2.55
HOXA4-204ENST00000610970 ADAMTSL3P82987 1691 aa30.96■■■□□ 2.55
HOXA4-204ENST00000610970 CABP1Q9NZU7 370 aa30.95■■■□□ 2.55
HOXA4-204ENST00000610970 U2AF1L5P0DN76 240 aaPredicted RBP30.95■■■□□ 2.54
HOXA4-204ENST00000610970 U2AF1Q01081 240 aaKnown RBP eCLIP30.95■■■□□ 2.54
HOXA4-204ENST00000610970 DMRT2Q9Y5R5 561 aa30.95■■■□□ 2.54
HOXA4-204ENST00000610970 MSH5O43196 834 aa30.94■■■□□ 2.54
HOXA4-204ENST00000610970 CENPQQ7L2Z9 268 aaPredicted RBP30.94■■■□□ 2.54
HOXA4-204ENST00000610970 PDE3AQ14432 1141 aa30.93■■■□□ 2.54
HOXA4-204ENST00000610970 PNNQ9H307 717 aaKnown RBP30.93■■■□□ 2.54
HOXA4-204ENST00000610970 UBR1Q8IWV7 1749 aa30.93■■■□□ 2.54
HOXA4-204ENST00000610970 KDM2BQ8NHM5 1336 aa30.92■■■□□ 2.54
HOXA4-204ENST00000610970 PNPLA6Q8IY17 1366 aa30.92■■■□□ 2.54
HOXA4-204ENST00000610970 CPS1P31327 1500 aa30.91■■■□□ 2.54
HOXA4-204ENST00000610970 WAPLQ7Z5K2 1190 aa30.91■■■□□ 2.54
HOXA4-204ENST00000610970 TMEM2Q9UHN6 1383 aa30.9■■■□□ 2.54
HOXA4-204ENST00000610970 MYH16Q9H6N6 1097 aa30.9■■■□□ 2.54
HOXA4-204ENST00000610970 FER1L4A9Z1Z3 1794 aa30.89■■■□□ 2.54
HOXA4-204ENST00000610970 METP08581 1390 aa30.89■■■□□ 2.54
HOXA4-204ENST00000610970 WASLO00401 505 aaPredicted RBP30.89■■■□□ 2.54
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms