RNA–Protein interactions for RNA: ENST00000610470.4

PRKN-208, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 2 BASIC

Gene PRKN, Length 531 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-208ENST00000610470 KNDC1Q76NI1 1749 aa25.52■■□□□ 1.68
PRKN-208ENST00000610470 ORAI2Q96SN7 254 aa25.52■■□□□ 1.68
PRKN-208ENST00000610470 YTHDC2Q9H6S0 1430 aaKnown RBP25.52■■□□□ 1.68
PRKN-208ENST00000610470 NUTM2BA6NNL0 878 aaPredicted RBP25.51■■□□□ 1.67
PRKN-208ENST00000610470 NUTM2EB1AL46 878 aaPredicted RBP25.51■■□□□ 1.67
PRKN-208ENST00000610470 WAPLQ7Z5K2 1190 aa25.51■■□□□ 1.67
PRKN-208ENST00000610470 NUTM2AQ8IVF1 878 aaPredicted RBP25.51■■□□□ 1.67
PRKN-208ENST00000610470 LAMC1P11047 1609 aa25.49■■□□□ 1.67
PRKN-208ENST00000610470 ZNF772Q68DY9 489 aaPredicted RBP25.49■■□□□ 1.67
PRKN-208ENST00000610470 SIRT1Q96EB6 747 aa25.48■■□□□ 1.67
PRKN-208ENST00000610470 DHX57Q6P158 1386 aaKnown RBP25.47■■□□□ 1.67
PRKN-208ENST00000610470 PNPLA6Q8IY17 1366 aa25.47■■□□□ 1.67
PRKN-208ENST00000610470 SOS2Q07890 1332 aaPredicted RBP25.47■■□□□ 1.67
PRKN-208ENST00000610470 CFAP70Q5T0N1 1121 aa25.47■■□□□ 1.67
PRKN-208ENST00000610470 PLEKHH1Q9ULM0 1364 aa25.46■■□□□ 1.67
PRKN-208ENST00000610470 ESCO1Q5FWF5 840 aa25.45■■□□□ 1.66
PRKN-208ENST00000610470 NPHP3Q7Z494 1330 aa25.42■■□□□ 1.66
PRKN-208ENST00000610470 STAC3Q96MF2 364 aa25.41■■□□□ 1.66
PRKN-208ENST00000610470 NUTM2FA1L443 756 aa25.39■■□□□ 1.66
PRKN-208ENST00000610470 DCAF11Q8TEB1 546 aa25.39■■□□□ 1.66
PRKN-208ENST00000610470 KDM2AQ9Y2K7 1162 aa25.38■■□□□ 1.65
PRKN-208ENST00000610470 AFF2P51816 1311 aa25.37■■□□□ 1.65
PRKN-208ENST00000610470 C8orf37Q96NL8 207 aa25.36■■□□□ 1.65
PRKN-208ENST00000610470 PRAM1Q96QH2 718 aa25.36■■□□□ 1.65
PRKN-208ENST00000610470 FMN2Q9NZ56 1722 aa25.36■■□□□ 1.65
PRKN-208ENST00000610470 DLC1Q96QB1 1528 aa25.36■■□□□ 1.65
PRKN-208ENST00000610470 FOXO3O43524 673 aa25.35■■□□□ 1.65
PRKN-208ENST00000610470 POGKQ9P215 609 aa25.34■■□□□ 1.65
PRKN-208ENST00000610470 PXDNQ92626 1479 aa25.34■■□□□ 1.65
PRKN-208ENST00000610470 ADGRB1O14514 1584 aa25.33■■□□□ 1.65
PRKN-208ENST00000610470 RXRBP28702 533 aa25.33■■□□□ 1.65
PRKN-208ENST00000610470 ADAMTS2O95450 1211 aa25.32■■□□□ 1.64
PRKN-208ENST00000610470 SAFB2Q14151 953 aaKnown RBP eCLIP25.32■■□□□ 1.64
PRKN-208ENST00000610470 KIF1AQ12756 1690 aa25.31■■□□□ 1.64
PRKN-208ENST00000610470 COL22A1Q8NFW1 1626 aaPredicted RBP25.3■■□□□ 1.64
PRKN-208ENST00000610470 XPCQ01831 940 aaPredicted RBP25.3■■□□□ 1.64
PRKN-208ENST00000610470 NGLY1Q96IV0 654 aa25.3■■□□□ 1.64
PRKN-208ENST00000610470 TRAK1Q9UPV9 953 aa25.29■■□□□ 1.64
PRKN-208ENST00000610470 QTRT2Q9H974 415 aaKnown RBP25.26■■□□□ 1.63
PRKN-208ENST00000610470 PHF8Q9UPP1 1060 aa25.26■■□□□ 1.63
PRKN-208ENST00000610470 CDK12Q9NYV4 1490 aaPredicted RBP25.26■■□□□ 1.63
PRKN-208ENST00000610470 ADGRB2O60241 1585 aa25.24■■□□□ 1.63
PRKN-208ENST00000610470 KRT28Q7Z3Y7 464 aa25.24■■□□□ 1.63
PRKN-208ENST00000610470 ANKARQ7Z5J8 1434 aa25.23■■□□□ 1.63
PRKN-208ENST00000610470 RBM6P78332 1123 aaKnown RBP25.23■■□□□ 1.63
PRKN-208ENST00000610470 SPATA31A3Q5VYP0 1347 aa25.22■■□□□ 1.63
PRKN-208ENST00000610470 PSME1Q06323 249 aa25.22■■□□□ 1.63
PRKN-208ENST00000610470 EIF3AQ14152 1382 aaKnown RBP25.21■■□□□ 1.63
PRKN-208ENST00000610470 USP21Q9UK80 565 aa25.21■■□□□ 1.63
PRKN-208ENST00000610470 RGPD8O14715 1765 aaPredicted RBP25.21■■□□□ 1.63
PRKN-208ENST00000610470 FNBP4Q8N3X1 1017 aaPredicted RBP25.2■■□□□ 1.62
PRKN-208ENST00000610470 HIRIP3Q9BW71 556 aaPredicted RBP25.2■■□□□ 1.62
PRKN-208ENST00000610470 MINK1Q8N4C8 1332 aaPredicted RBP25.19■■□□□ 1.62
PRKN-208ENST00000610470 TRPC5Q9UL62 973 aaPredicted RBP25.18■■□□□ 1.62
PRKN-208ENST00000610470 TNS3Q68CZ2 1445 aa25.17■■□□□ 1.62
PRKN-208ENST00000610470 WASLO00401 505 aaPredicted RBP25.16■■□□□ 1.62
PRKN-208ENST00000610470 SBNO1A3KN83 1393 aa25.16■■□□□ 1.62
PRKN-208ENST00000610470 USP32Q8NFA0 1604 aa25.15■■□□□ 1.62
PRKN-208ENST00000610470 PMFBP1Q8TBY8 1022 aa25.15■■□□□ 1.62
PRKN-208ENST00000610470 TULP4Q9NRJ4 1543 aa25.14■■□□□ 1.62
PRKN-208ENST00000610470 RGS12O14924 1447 aa25.13■■□□□ 1.61
PRKN-208ENST00000610470 ARHGEF28Q8N1W1 1705 aaKnown RBP25.13■■□□□ 1.61
PRKN-208ENST00000610470 KIAA1210Q9ULL0 1709 aa25.13■■□□□ 1.61
PRKN-208ENST00000610470 MARF1Q9Y4F3 1742 aaKnown RBP25.13■■□□□ 1.61
PRKN-208ENST00000610470 UPF1Q92900 1129 aaKnown RBP eCLIP25.12■■□□□ 1.61
PRKN-208ENST00000610470 ATRNO75882 1429 aa25.12■■□□□ 1.61
PRKN-208ENST00000610470 ARHGEF10O15013 1369 aa25.11■■□□□ 1.61
PRKN-208ENST00000610470 PRR36Q9H6K5 1346 aa25.11■■□□□ 1.61
PRKN-208ENST00000610470 HAP1P54257 671 aaPredicted RBP25.1■■□□□ 1.61
PRKN-208ENST00000610470 LMOD2Q6P5Q4 547 aa25.1■■□□□ 1.61
PRKN-208ENST00000610470 GPRASP1Q5JY77 1395 aa25.09■■□□□ 1.61
PRKN-208ENST00000610470 BCL9LQ86UU0 1499 aa25.09■■□□□ 1.61
PRKN-208ENST00000610470 NBPF1Q3BBV0 1214 aa25.05■■□□□ 1.6
PRKN-208ENST00000610470 NGDNQ8NEJ9 315 aaKnown RBP25.05■■□□□ 1.6
PRKN-208ENST00000610470 SLIT2O94813 1529 aa25.04■■□□□ 1.6
PRKN-208ENST00000610470 UNC5CLQ8IV45 518 aa25.04■■□□□ 1.6
PRKN-208ENST00000610470 CABLES1Q8TDN4 633 aa25.04■■□□□ 1.6
PRKN-208ENST00000610470 PLEKHG5O94827 1062 aa25.03■■□□□ 1.6
PRKN-208ENST00000610470 NUDT16Q96DE0 195 aaKnown RBP25.03■■□□□ 1.6
PRKN-208ENST00000610470 ATP7BP35670 1465 aa25.02■■□□□ 1.6
PRKN-208ENST00000610470 L3MBTL2Q969R5 705 aa25.02■■□□□ 1.6
PRKN-208ENST00000610470 GJD4Q96KN9 370 aaPredicted RBP25.02■■□□□ 1.6
PRKN-208ENST00000610470 CDK19Q9BWU1 502 aa25.02■■□□□ 1.6
PRKN-208ENST00000610470 TNKS1BP1Q9C0C2 1729 aaKnown RBP25.02■■□□□ 1.6
PRKN-208ENST00000610470 TRPM3Q9HCF6 1732 aaPredicted RBP25.02■■□□□ 1.6
PRKN-208ENST00000610470 ITSN1Q15811 1721 aa25.01■■□□□ 1.59
PRKN-208ENST00000610470 SIN3AQ96ST3 1273 aa25■■□□□ 1.59
PRKN-208ENST00000610470 ABCA3Q99758 1704 aa24.98■■□□□ 1.59
PRKN-208ENST00000610470 ATAD2Q6PL18 1390 aa24.98■■□□□ 1.59
PRKN-208ENST00000610470 CENPJQ9HC77 1338 aaPredicted RBP24.97■■□□□ 1.59
PRKN-208ENST00000610470 PAK3O75914 559 aaPredicted RBP24.97■■□□□ 1.59
PRKN-208ENST00000610470 NEUROD1Q13562 356 aa24.97■■□□□ 1.59
PRKN-208ENST00000610470 ALS2Q96Q42 1657 aa24.97■■□□□ 1.59
PRKN-208ENST00000610470 CCDC61Q9Y6R9 512 aa24.96■■□□□ 1.59
PRKN-208ENST00000610470 RALGAPBQ86X10 1494 aa24.94■■□□□ 1.58
PRKN-208ENST00000610470 NWD2Q9ULI1 1742 aa24.93■■□□□ 1.58
PRKN-208ENST00000610470 PLCH1Q4KWH8 1693 aa24.92■■□□□ 1.58
PRKN-208ENST00000610470 FAM83GA6ND36 823 aa24.92■■□□□ 1.58
PRKN-208ENST00000610470 VPS72Q15906 364 aa24.92■■□□□ 1.58
PRKN-208ENST00000610470 POLR3AO14802 1390 aaPredicted RBP24.92■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms