RNA–Protein interactions for RNA: ENST00000606347.1

UCHL3-204, Transcript of ubiquitin C-terminal hydrolase L3, humanhuman

TSL 2

Gene UCHL3, Length 722 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UCHL3-204ENST00000606347 FECHP22830 423 aa10.42□□□□□ -0.74
UCHL3-204ENST00000606347 VEGFBP49765 207 aa10.42□□□□□ -0.74
UCHL3-204ENST00000606347 IRF7Q92985 503 aa10.42□□□□□ -0.74
UCHL3-204ENST00000606347 FCHSD2O94868 740 aa10.4□□□□□ -0.74
UCHL3-204ENST00000606347 BRICD5Q6PL45 260 aa10.4□□□□□ -0.74
UCHL3-204ENST00000606347 DDX11L8A8MPP1 907 aa10.38□□□□□ -0.75
UCHL3-204ENST00000606347 RNF19BQ6ZMZ0 732 aa10.38□□□□□ -0.75
UCHL3-204ENST00000606347 METTL3Q86U44 580 aaKnown RBP10.38□□□□□ -0.75
UCHL3-204ENST00000606347 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.38□□□□□ -0.75
UCHL3-204ENST00000606347 MSS51Q4VC12 460 aa10.37□□□□□ -0.75
UCHL3-204ENST00000606347 CFAP44Q96MT7 982 aa10.37□□□□□ -0.75
UCHL3-204ENST00000606347 REPIN1Q9BWE0 567 aaKnown RBP10.37□□□□□ -0.75
UCHL3-204ENST00000606347 SALL2Q9Y467 1007 aaPredicted RBP10.37□□□□□ -0.75
UCHL3-204ENST00000606347 BMP1P13497 986 aa10.34□□□□□ -0.75
UCHL3-204ENST00000606347 RC3H1Q5TC82 1133 aaKnown RBP10.34□□□□□ -0.75
UCHL3-204ENST00000606347 PAXIP1Q6ZW49 1069 aaPredicted RBP10.34□□□□□ -0.75
UCHL3-204ENST00000606347 ARHGEF1Q92888 912 aaKnown RBP10.34□□□□□ -0.75
UCHL3-204ENST00000606347 DAXXQ9UER7 740 aaPredicted RBP10.34□□□□□ -0.75
UCHL3-204ENST00000606347 ERBB4Q15303 1308 aa10.33□□□□□ -0.76
UCHL3-204ENST00000606347 NPAS3Q8IXF0 933 aa10.33□□□□□ -0.76
UCHL3-204ENST00000606347 H3BM21 787 aa10.32□□□□□ -0.76
UCHL3-204ENST00000606347 ALDH1A1P00352 501 aa10.32□□□□□ -0.76
UCHL3-204ENST00000606347 GCGRP47871 477 aa10.32□□□□□ -0.76
UCHL3-204ENST00000606347 TRIM46Q7Z4K8 759 aa10.31□□□□□ -0.76
UCHL3-204ENST00000606347 NLRP7Q8WX94 980 aa10.31□□□□□ -0.76
UCHL3-204ENST00000606347 SKOR1P84550 965 aa10.3□□□□□ -0.76
UCHL3-204ENST00000606347 CCDC24Q8N4L8 307 aa10.3□□□□□ -0.76
UCHL3-204ENST00000606347 MMP16P51512 607 aa10.29□□□□□ -0.76
UCHL3-204ENST00000606347 KCTD17Q8N5Z5 321 aa10.28□□□□□ -0.76
UCHL3-204ENST00000606347 CAPN5O15484 640 aaPredicted RBP10.27□□□□□ -0.77
UCHL3-204ENST00000606347 KCNV2Q8TDN2 545 aa10.27□□□□□ -0.77
UCHL3-204ENST00000606347 WNT7BP56706 349 aa10.25□□□□□ -0.77
UCHL3-204ENST00000606347 HIC1Q14526 733 aa10.25□□□□□ -0.77
UCHL3-204ENST00000606347 Q3C1V9 767 aa10.25□□□□□ -0.77
UCHL3-204ENST00000606347 GRIPAP1Q4V328 841 aa10.25□□□□□ -0.77
UCHL3-204ENST00000606347 SULF1Q8IWU6 871 aa10.25□□□□□ -0.77
UCHL3-204ENST00000606347 DXOO77932 396 aaKnown RBP10.23□□□□□ -0.77
UCHL3-204ENST00000606347 USB1Q9BQ65 265 aaKnown RBP10.22□□□□□ -0.77
UCHL3-204ENST00000606347 WASF2Q9Y6W5 498 aa10.22□□□□□ -0.77
UCHL3-204ENST00000606347 ZFP42Q96MM3 310 aa10.21□□□□□ -0.77
UCHL3-204ENST00000606347 KCNMA1Q12791 1236 aa10.2□□□□□ -0.78
UCHL3-204ENST00000606347 EHBP1Q8NDI1 1231 aa10.18□□□□□ -0.78
UCHL3-204ENST00000606347 SIAH2O43255 324 aa10.17□□□□□ -0.78
UCHL3-204ENST00000606347 SEMA3EO15041 775 aa10.16□□□□□ -0.78
UCHL3-204ENST00000606347 GNPATO15228 680 aa10.16□□□□□ -0.78
UCHL3-204ENST00000606347 GSK3AP49840 483 aa10.16□□□□□ -0.78
UCHL3-204ENST00000606347 PHOX2BQ99453 314 aa10.15□□□□□ -0.78
UCHL3-204ENST00000606347 TMEM151AQ8N4L1 468 aa10.14□□□□□ -0.79
UCHL3-204ENST00000606347 SOBPA7XYQ1 873 aa10.13□□□□□ -0.79
UCHL3-204ENST00000606347 RBM26Q5T8P6 1007 aaKnown RBP10.12□□□□□ -0.79
UCHL3-204ENST00000606347 GDF11O95390 407 aa10.11□□□□□ -0.79
UCHL3-204ENST00000606347 VSIG8P0DPA2 414 aa10.11□□□□□ -0.79
UCHL3-204ENST00000606347 HLA-CQ95604 372 aa10.11□□□□□ -0.79
UCHL3-204ENST00000606347 RASSF7Q02833 373 aa10.09□□□□□ -0.79
UCHL3-204ENST00000606347 SCARF1Q14162 830 aa10.09□□□□□ -0.79
UCHL3-204ENST00000606347 PTCRAQ6ISU1 281 aaPredicted RBP10.09□□□□□ -0.79
UCHL3-204ENST00000606347 PURBQ96QR8 312 aaKnown RBP10.09□□□□□ -0.79
UCHL3-204ENST00000606347 KDM4AO75164 1064 aa10.08□□□□□ -0.8
UCHL3-204ENST00000606347 MRPL14Q6P1L8 145 aaKnown RBP10.08□□□□□ -0.8
UCHL3-204ENST00000606347 JUNDP17535 347 aa10.07□□□□□ -0.8
UCHL3-204ENST00000606347 CD46P15529 392 aa10.06□□□□□ -0.8
UCHL3-204ENST00000606347 TLL2Q9Y6L7 1015 aa10.06□□□□□ -0.8
UCHL3-204ENST00000606347 GPR37O15354 613 aa10.05□□□□□ -0.8
UCHL3-204ENST00000606347 SH3BP2P78314 561 aa10.05□□□□□ -0.8
UCHL3-204ENST00000606347 NUDT12Q9BQG2 462 aa10.05□□□□□ -0.8
UCHL3-204ENST00000606347 SYMPKQ92797 1274 aaKnown RBP10.04□□□□□ -0.8
UCHL3-204ENST00000606347 GUCA2AQ02747 115 aa10.03□□□□□ -0.8
UCHL3-204ENST00000606347 NNTQ13423 1086 aa10.03□□□□□ -0.8
UCHL3-204ENST00000606347 TSHZ2Q9NRE2 1034 aa10.02□□□□□ -0.81
UCHL3-204ENST00000606347 RTN4Q9NQC3 1192 aaKnown RBP10.01□□□□□ -0.81
UCHL3-204ENST00000606347 RNF225M0QZC1 329 aaPredicted RBP10□□□□□ -0.81
UCHL3-204ENST00000606347 MAN1A2O60476 641 aa10□□□□□ -0.81
UCHL3-204ENST00000606347 WDR4P57081 412 aaKnown RBP10□□□□□ -0.81
UCHL3-204ENST00000606347 USP46P62068 366 aa10□□□□□ -0.81
UCHL3-204ENST00000606347 LINC01559Q495D7 138 aa10□□□□□ -0.81
UCHL3-204ENST00000606347 HOXA2O43364 376 aa9.99□□□□□ -0.81
UCHL3-204ENST00000606347 PPFIA3O75145 1194 aa9.99□□□□□ -0.81
UCHL3-204ENST00000606347 TIMP2P16035 220 aa9.99□□□□□ -0.81
UCHL3-204ENST00000606347 P3H3Q8IVL6 736 aa9.99□□□□□ -0.81
UCHL3-204ENST00000606347 ADAMTS8Q9UP79 889 aa9.99□□□□□ -0.81
UCHL3-204ENST00000606347 PLEKHG3A1L390 1219 aa9.98□□□□□ -0.81
UCHL3-204ENST00000606347 GPAT2Q6NUI2 795 aa9.98□□□□□ -0.81
UCHL3-204ENST00000606347 ADH1CP00326 375 aa9.97□□□□□ -0.81
UCHL3-204ENST00000606347 AMER1Q5JTC6 1135 aaPredicted RBP9.97□□□□□ -0.81
UCHL3-204ENST00000606347 C6orf118Q5T5N4 469 aa9.96□□□□□ -0.82
UCHL3-204ENST00000606347 SMYD5Q6GMV2 418 aa9.96□□□□□ -0.82
UCHL3-204ENST00000606347 TESPA1A2RU30 521 aaPredicted RBP9.95□□□□□ -0.82
UCHL3-204ENST00000606347 RETREG3Q86VR2 466 aa9.95□□□□□ -0.82
UCHL3-204ENST00000606347 BAP1Q92560 729 aa9.95□□□□□ -0.82
UCHL3-204ENST00000606347 CNTNAP3BQ96NU0 1288 aa9.95□□□□□ -0.82
UCHL3-204ENST00000606347 CNTNAP3Q9BZ76 1288 aa9.95□□□□□ -0.82
UCHL3-204ENST00000606347 CCNYL3P0C7X3 344 aa9.94□□□□□ -0.82
UCHL3-204ENST00000606347 UNC93B1Q9H1C4 597 aa9.94□□□□□ -0.82
UCHL3-204ENST00000606347 MS4A1P11836 297 aa9.93□□□□□ -0.82
UCHL3-204ENST00000606347 KRT76Q01546 638 aa9.93□□□□□ -0.82
UCHL3-204ENST00000606347 VARSP26640 1264 aaKnown RBP9.92□□□□□ -0.82
UCHL3-204ENST00000606347 XP32Q5T750 250 aa9.92□□□□□ -0.82
UCHL3-204ENST00000606347 IRS1P35568 1242 aa9.91□□□□□ -0.82
UCHL3-204ENST00000606347 GPR161Q8N6U8 529 aaKnown RBP9.91□□□□□ -0.82
UCHL3-204ENST00000606347 ZFAND3Q9H8U3 227 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms