RNA–Protein interactions for RNA: ENST00000603633.2

LINC00221-201, long intergenic non-protein coding RNA 221, humanhuman

TSL 2 BASIC

Gene LINC00221, Length 1,656 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00221-201ENST00000603633 SLAIN2Q9P270 581 aa22.24■■□□□ 1.15
LINC00221-201ENST00000603633 SAFB2Q14151 953 aaKnown RBP eCLIP22.23■■□□□ 1.15
LINC00221-201ENST00000603633 EIF3AQ14152 1382 aaKnown RBP22.23■■□□□ 1.15
LINC00221-201ENST00000603633 PIP4K2BP78356 416 aa22.21■■□□□ 1.15
LINC00221-201ENST00000603633 CENPJQ9HC77 1338 aaPredicted RBP22.2■■□□□ 1.14
LINC00221-201ENST00000603633 KNDC1Q76NI1 1749 aa22.2■■□□□ 1.14
LINC00221-201ENST00000603633 SCAF1Q9H7N4 1312 aaKnown RBP22.19■■□□□ 1.14
LINC00221-201ENST00000603633 TRPM1Q7Z4N2 1603 aa22.18■■□□□ 1.14
LINC00221-201ENST00000603633 MINK1Q8N4C8 1332 aaPredicted RBP22.16■■□□□ 1.14
LINC00221-201ENST00000603633 SLC24A1O60721 1099 aa22.15■■□□□ 1.14
LINC00221-201ENST00000603633 WASLO00401 505 aaPredicted RBP22.14■■□□□ 1.14
LINC00221-201ENST00000603633 HIRIP3Q9BW71 556 aaPredicted RBP22.14■■□□□ 1.13
LINC00221-201ENST00000603633 MST1RQ04912 1400 aa22.13■■□□□ 1.13
LINC00221-201ENST00000603633 ILDR1Q86SU0 546 aaPredicted RBP22.11■■□□□ 1.13
LINC00221-201ENST00000603633 XIRP1Q702N8 1843 aaKnown RBP22.11■■□□□ 1.13
LINC00221-201ENST00000603633 CDC42BPGQ6DT37 1551 aa22.11■■□□□ 1.13
LINC00221-201ENST00000603633 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.11■■□□□ 1.13
LINC00221-201ENST00000603633 C1orf167Q5SNV9 1468 aa22.1■■□□□ 1.13
LINC00221-201ENST00000603633 BRINP3Q76B58 766 aa22.09■■□□□ 1.13
LINC00221-201ENST00000603633 CDK19Q9BWU1 502 aa22.08■■□□□ 1.13
LINC00221-201ENST00000603633 SBNO2Q9Y2G9 1366 aa22.08■■□□□ 1.12
LINC00221-201ENST00000603633 EVC2Q86UK5 1308 aa22.08■■□□□ 1.12
LINC00221-201ENST00000603633 ESCO1Q5FWF5 840 aa22.07■■□□□ 1.12
LINC00221-201ENST00000603633 USP47Q96K76 1375 aa22.07■■□□□ 1.12
LINC00221-201ENST00000603633 NUTM2FA1L443 756 aa22.07■■□□□ 1.12
LINC00221-201ENST00000603633 NALCNQ8IZF0 1738 aa22.07■■□□□ 1.12
LINC00221-201ENST00000603633 ANKARQ7Z5J8 1434 aa22.06■■□□□ 1.12
LINC00221-201ENST00000603633 ST20-MTHFSA0A0A6YYL1 179 aa22.06■■□□□ 1.12
LINC00221-201ENST00000603633 ADGRB2O60241 1585 aa22.05■■□□□ 1.12
LINC00221-201ENST00000603633 SRPK2P78362 688 aaKnown RBP22.04■■□□□ 1.12
LINC00221-201ENST00000603633 ORAI2Q96SN7 254 aa22.04■■□□□ 1.12
LINC00221-201ENST00000603633 ARHGEF28Q8N1W1 1705 aaKnown RBP22.04■■□□□ 1.12
LINC00221-201ENST00000603633 EIF4G2P78344 907 aaKnown RBP eCLIP22.03■■□□□ 1.12
LINC00221-201ENST00000603633 NUDT16Q96DE0 195 aaKnown RBP22.03■■□□□ 1.12
LINC00221-201ENST00000603633 HSPA1LP34931 641 aa22.02■■□□□ 1.12
LINC00221-201ENST00000603633 CCDC61Q9Y6R9 512 aa22.02■■□□□ 1.12
LINC00221-201ENST00000603633 PHF8Q9UPP1 1060 aa22.01■■□□□ 1.11
LINC00221-201ENST00000603633 ZEB1P37275 1124 aaPredicted RBP22■■□□□ 1.11
LINC00221-201ENST00000603633 PUS7Q96PZ0 661 aaKnown RBP22■■□□□ 1.11
LINC00221-201ENST00000603633 TESK2Q96S53 571 aa22■■□□□ 1.11
LINC00221-201ENST00000603633 NPHP3Q7Z494 1330 aa22■■□□□ 1.11
LINC00221-201ENST00000603633 TULP4Q9NRJ4 1543 aa21.99■■□□□ 1.11
LINC00221-201ENST00000603633 CABP2Q9NPB3 220 aa21.98■■□□□ 1.11
LINC00221-201ENST00000603633 PRR36Q9H6K5 1346 aa21.98■■□□□ 1.11
LINC00221-201ENST00000603633 TMF1P82094 1093 aa21.98■■□□□ 1.11
LINC00221-201ENST00000603633 CDCA8Q53HL2 280 aa21.97■■□□□ 1.11
LINC00221-201ENST00000603633 FOXO3O43524 673 aa21.96■■□□□ 1.11
LINC00221-201ENST00000603633 ATAD2Q6PL18 1390 aa21.95■■□□□ 1.1
LINC00221-201ENST00000603633 ROBO1Q9Y6N7 1651 aa21.95■■□□□ 1.1
LINC00221-201ENST00000603633 PLEKHG3A1L390 1219 aa21.95■■□□□ 1.1
LINC00221-201ENST00000603633 NGDNQ8NEJ9 315 aaKnown RBP21.94■■□□□ 1.1
LINC00221-201ENST00000603633 PMFBP1Q8TBY8 1022 aa21.94■■□□□ 1.1
LINC00221-201ENST00000603633 LRRC59Q96AG4 307 aaKnown RBP21.94■■□□□ 1.1
LINC00221-201ENST00000603633 FMN2Q9NZ56 1722 aa21.93■■□□□ 1.1
LINC00221-201ENST00000603633 ATP7BP35670 1465 aa21.93■■□□□ 1.1
LINC00221-201ENST00000603633 SOS2Q07890 1332 aaPredicted RBP21.93■■□□□ 1.1
LINC00221-201ENST00000603633 HSPA5P11021 654 aaKnown RBP21.93■■□□□ 1.1
LINC00221-201ENST00000603633 PSME1Q06323 249 aa21.93■■□□□ 1.1
LINC00221-201ENST00000603633 QRICH2Q9H0J4 1663 aa21.91■■□□□ 1.1
LINC00221-201ENST00000603633 DDX17Q92841 729 aaKnown RBP21.91■■□□□ 1.1
LINC00221-201ENST00000603633 AHDC1Q5TGY3 1603 aaPredicted RBP21.91■■□□□ 1.1
LINC00221-201ENST00000603633 KRT28Q7Z3Y7 464 aa21.9■■□□□ 1.1
LINC00221-201ENST00000603633 CABP1Q9NZU7 370 aa21.9■■□□□ 1.1
LINC00221-201ENST00000603633 PPIP5K1Q6PFW1 1433 aa21.88■■□□□ 1.09
LINC00221-201ENST00000603633 JCADQ9P266 1359 aa21.87■■□□□ 1.09
LINC00221-201ENST00000603633 ACEP12821 1306 aa21.87■■□□□ 1.09
LINC00221-201ENST00000603633 ZNF692Q9BU19 519 aaPredicted RBP21.87■■□□□ 1.09
LINC00221-201ENST00000603633 POLR3AO14802 1390 aaPredicted RBP21.86■■□□□ 1.09
LINC00221-201ENST00000603633 NINLQ9Y2I6 1382 aa21.85■■□□□ 1.09
LINC00221-201ENST00000603633 XPCQ01831 940 aaPredicted RBP21.85■■□□□ 1.09
LINC00221-201ENST00000603633 TMC1Q8TDI8 760 aa21.85■■□□□ 1.09
LINC00221-201ENST00000603633 SBNO1A3KN83 1393 aa21.84■■□□□ 1.09
LINC00221-201ENST00000603633 DISP3Q9P2K9 1392 aa21.84■■□□□ 1.09
LINC00221-201ENST00000603633 KIF1AQ12756 1690 aa21.84■■□□□ 1.09
LINC00221-201ENST00000603633 USP32Q8NFA0 1604 aa21.84■■□□□ 1.09
LINC00221-201ENST00000603633 BRD4O60885 1362 aaPredicted RBP21.82■■□□□ 1.08
LINC00221-201ENST00000603633 PXDNQ92626 1479 aa21.82■■□□□ 1.08
LINC00221-201ENST00000603633 TERF2IPQ9NYB0 399 aa21.82■■□□□ 1.08
LINC00221-201ENST00000603633 SPATA31A3Q5VYP0 1347 aa21.81■■□□□ 1.08
LINC00221-201ENST00000603633 SPATA31A6Q5VVP1 1343 aa21.81■■□□□ 1.08
LINC00221-201ENST00000603633 HDGFL2Q7Z4V5 671 aaPredicted RBP21.8■■□□□ 1.08
LINC00221-201ENST00000603633 SLC12A5Q9H2X9 1139 aa21.8■■□□□ 1.08
LINC00221-201ENST00000603633 NHSL1Q5SYE7 1610 aa21.79■■□□□ 1.08
LINC00221-201ENST00000603633 COL16A1Q07092 1604 aaPredicted RBP21.79■■□□□ 1.08
LINC00221-201ENST00000603633 ARHGEF10O15013 1369 aa21.78■■□□□ 1.08
LINC00221-201ENST00000603633 PHLPP1O60346 1717 aa21.78■■□□□ 1.08
LINC00221-201ENST00000603633 PAK3O75914 559 aaPredicted RBP21.78■■□□□ 1.08
LINC00221-201ENST00000603633 PNPLA6Q8IY17 1366 aa21.77■■□□□ 1.08
LINC00221-201ENST00000603633 TNS3Q68CZ2 1445 aa21.77■■□□□ 1.08
LINC00221-201ENST00000603633 LMOD2Q6P5Q4 547 aa21.76■■□□□ 1.07
LINC00221-201ENST00000603633 CPSF1Q10570 1443 aaKnown RBP21.75■■□□□ 1.07
LINC00221-201ENST00000603633 USP6P35125 1406 aa21.74■■□□□ 1.07
LINC00221-201ENST00000603633 ITSN1Q15811 1721 aa21.74■■□□□ 1.07
LINC00221-201ENST00000603633 KTN1Q86UP2 1357 aaKnown RBP21.73■■□□□ 1.07
LINC00221-201ENST00000603633 POLR3GLQ9BT43 218 aa21.73■■□□□ 1.07
LINC00221-201ENST00000603633 TOPAZ1Q8N9V7 1692 aa21.72■■□□□ 1.07
LINC00221-201ENST00000603633 ABTB2Q8N961 1025 aa21.72■■□□□ 1.07
LINC00221-201ENST00000603633 ANKRD36BQ8N2N9 1353 aa21.71■■□□□ 1.07
LINC00221-201ENST00000603633 TTC21AQ8NDW8 1320 aa21.71■■□□□ 1.07
LINC00221-201ENST00000603633 TTC21BQ7Z4L5 1316 aa21.7■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 254.2 ms