RNA–Protein interactions for RNA: ENST00000602056.1

GTPBP3-227, Transcript of GTP binding protein 3, mitochondrial, humanhuman

TSL 2

Gene GTPBP3, Length 861 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTPBP3-227ENST00000602056 TECPR2O15040 1411 aa34.61■■■■□ 3.13
GTPBP3-227ENST00000602056 PIK3C2GO75747 1445 aa34.59■■■■□ 3.13
GTPBP3-227ENST00000602056 C8orf37Q96NL8 207 aa34.59■■■■□ 3.13
GTPBP3-227ENST00000602056 ABCC11Q96J66 1382 aa34.58■■■■□ 3.13
GTPBP3-227ENST00000602056 PLEKHH1Q9ULM0 1364 aa34.57■■■■□ 3.12
GTPBP3-227ENST00000602056 CDC42BPGQ6DT37 1551 aa34.55■■■■□ 3.12
GTPBP3-227ENST00000602056 IFT172Q9UG01 1749 aa34.55■■■■□ 3.12
GTPBP3-227ENST00000602056 ADAMTS2O95450 1211 aa34.54■■■■□ 3.12
GTPBP3-227ENST00000602056 ESCO1Q5FWF5 840 aa34.54■■■■□ 3.12
GTPBP3-227ENST00000602056 ACIN1Q9UKV3 1341 aaKnown RBP34.52■■■■□ 3.12
GTPBP3-227ENST00000602056 UPF1Q92900 1129 aaKnown RBP eCLIP34.5■■■■□ 3.11
GTPBP3-227ENST00000602056 RAB3GAP2Q9H2M9 1393 aa34.49■■■■□ 3.11
GTPBP3-227ENST00000602056 YTHDC2Q9H6S0 1430 aaKnown RBP34.49■■■■□ 3.11
GTPBP3-227ENST00000602056 C14orf93Q9H972 538 aaKnown RBP34.49■■■■□ 3.11
GTPBP3-227ENST00000602056 QTRT2Q9H974 415 aaKnown RBP34.49■■■■□ 3.11
GTPBP3-227ENST00000602056 CDK12Q9NYV4 1490 aaPredicted RBP34.49■■■■□ 3.11
GTPBP3-227ENST00000602056 NUTM2FA1L443 756 aa34.48■■■■□ 3.11
GTPBP3-227ENST00000602056 FOXO3O43524 673 aa34.47■■■■□ 3.11
GTPBP3-227ENST00000602056 NGLY1Q96IV0 654 aa34.47■■■■□ 3.11
GTPBP3-227ENST00000602056 NPHP3Q7Z494 1330 aa34.47■■■■□ 3.11
GTPBP3-227ENST00000602056 NRXN1Q9ULB1 1477 aa34.46■■■■□ 3.11
GTPBP3-227ENST00000602056 PXDNQ92626 1479 aa34.46■■■■□ 3.11
GTPBP3-227ENST00000602056 XPCQ01831 940 aaPredicted RBP34.45■■■■□ 3.11
GTPBP3-227ENST00000602056 CFAP70Q5T0N1 1121 aa34.45■■■■□ 3.11
GTPBP3-227ENST00000602056 RBM6P78332 1123 aaKnown RBP34.43■■■■□ 3.1
GTPBP3-227ENST00000602056 SIRT1Q96EB6 747 aa34.43■■■■□ 3.1
GTPBP3-227ENST00000602056 KNDC1Q76NI1 1749 aa34.41■■■■□ 3.1
GTPBP3-227ENST00000602056 MYOM2P54296 1465 aa34.4■■■■□ 3.1
GTPBP3-227ENST00000602056 RGS12O14924 1447 aa34.4■■■■□ 3.1
GTPBP3-227ENST00000602056 FNBP4Q8N3X1 1017 aaPredicted RBP34.38■■■■□ 3.09
GTPBP3-227ENST00000602056 COL22A1Q8NFW1 1626 aaPredicted RBP34.37■■■■□ 3.09
GTPBP3-227ENST00000602056 USP21Q9UK80 565 aa34.36■■■■□ 3.09
GTPBP3-227ENST00000602056 DHX57Q6P158 1386 aaKnown RBP34.35■■■■□ 3.09
GTPBP3-227ENST00000602056 PRAM1Q96QH2 718 aa34.3■■■■□ 3.08
GTPBP3-227ENST00000602056 FMN2Q9NZ56 1722 aa34.3■■■■□ 3.08
GTPBP3-227ENST00000602056 TRPC5Q9UL62 973 aaPredicted RBP34.29■■■■□ 3.08
GTPBP3-227ENST00000602056 SAFB2Q14151 953 aaKnown RBP eCLIP34.28■■■■□ 3.08
GTPBP3-227ENST00000602056 SPATA31A3Q5VYP0 1347 aa34.28■■■■□ 3.08
GTPBP3-227ENST00000602056 ATRNO75882 1429 aa34.27■■■■□ 3.08
GTPBP3-227ENST00000602056 KRT28Q7Z3Y7 464 aa34.25■■■■□ 3.07
GTPBP3-227ENST00000602056 BCL9LQ86UU0 1499 aa34.25■■■■□ 3.07
GTPBP3-227ENST00000602056 PHF8Q9UPP1 1060 aa34.24■■■■□ 3.07
GTPBP3-227ENST00000602056 ADGRB1O14514 1584 aa34.23■■■■□ 3.07
GTPBP3-227ENST00000602056 DLC1Q96QB1 1528 aa34.2■■■■□ 3.07
GTPBP3-227ENST00000602056 HRCP23327 699 aa34.2■■■■□ 3.07
GTPBP3-227ENST00000602056 KDM2AQ9Y2K7 1162 aa34.2■■■■□ 3.07
GTPBP3-227ENST00000602056 DCAF11Q8TEB1 546 aa34.19■■■■□ 3.06
GTPBP3-227ENST00000602056 POGKQ9P215 609 aa34.19■■■■□ 3.06
GTPBP3-227ENST00000602056 KIF1AQ12756 1690 aa34.19■■■■□ 3.06
GTPBP3-227ENST00000602056 TRAK1Q9UPV9 953 aa34.17■■■■□ 3.06
GTPBP3-227ENST00000602056 TNS3Q68CZ2 1445 aa34.13■■■■□ 3.05
GTPBP3-227ENST00000602056 PSME1Q06323 249 aa34.12■■■■□ 3.05
GTPBP3-227ENST00000602056 HIRIP3Q9BW71 556 aaPredicted RBP34.12■■■■□ 3.05
GTPBP3-227ENST00000602056 CABLES1Q8TDN4 633 aa34.11■■■■□ 3.05
GTPBP3-227ENST00000602056 GJD4Q96KN9 370 aaPredicted RBP34.11■■■■□ 3.05
GTPBP3-227ENST00000602056 ANKARQ7Z5J8 1434 aa34.11■■■■□ 3.05
GTPBP3-227ENST00000602056 SBNO1A3KN83 1393 aa34.11■■■■□ 3.05
GTPBP3-227ENST00000602056 SLIT2O94813 1529 aa34.1■■■■□ 3.05
GTPBP3-227ENST00000602056 PMFBP1Q8TBY8 1022 aa34.1■■■■□ 3.05
GTPBP3-227ENST00000602056 ATAD2Q6PL18 1390 aa34.1■■■■□ 3.05
GTPBP3-227ENST00000602056 RGPD8O14715 1765 aaPredicted RBP34.09■■■■□ 3.05
GTPBP3-227ENST00000602056 MINK1Q8N4C8 1332 aaPredicted RBP34.08■■■■□ 3.05
GTPBP3-227ENST00000602056 UNC5CLQ8IV45 518 aa34.08■■■■□ 3.05
GTPBP3-227ENST00000602056 USP32Q8NFA0 1604 aa34.08■■■■□ 3.05
GTPBP3-227ENST00000602056 MARF1Q9Y4F3 1742 aaKnown RBP34.07■■■■□ 3.05
GTPBP3-227ENST00000602056 PRR36Q9H6K5 1346 aa34.07■■■■□ 3.05
GTPBP3-227ENST00000602056 ADGRB2O60241 1585 aa34.07■■■■□ 3.05
GTPBP3-227ENST00000602056 STAC3Q96MF2 364 aa34.07■■■■□ 3.04
GTPBP3-227ENST00000602056 PLEKHG5O94827 1062 aa34.05■■■■□ 3.04
GTPBP3-227ENST00000602056 LMOD2Q6P5Q4 547 aa34.02■■■■□ 3.04
GTPBP3-227ENST00000602056 WASLO00401 505 aaPredicted RBP34.01■■■■□ 3.03
GTPBP3-227ENST00000602056 RALGAPBQ86X10 1494 aa34.01■■■■□ 3.03
GTPBP3-227ENST00000602056 ARHGEF10O15013 1369 aa34■■■■□ 3.03
GTPBP3-227ENST00000602056 HAP1P54257 671 aaPredicted RBP34■■■■□ 3.03
GTPBP3-227ENST00000602056 GLI3P10071 1580 aa33.98■■■■□ 3.03
GTPBP3-227ENST00000602056 TNKS1BP1Q9C0C2 1729 aaKnown RBP33.96■■■■□ 3.03
GTPBP3-227ENST00000602056 TULP4Q9NRJ4 1543 aa33.96■■■■□ 3.03
GTPBP3-227ENST00000602056 FAM83GA6ND36 823 aa33.94■■■■□ 3.02
GTPBP3-227ENST00000602056 EIF3AQ14152 1382 aaKnown RBP33.94■■■■□ 3.02
GTPBP3-227ENST00000602056 VPS72Q15906 364 aa33.93■■■■□ 3.02
GTPBP3-227ENST00000602056 GPRASP1Q5JY77 1395 aa33.91■■■■□ 3.02
GTPBP3-227ENST00000602056 TRPM3Q9HCF6 1732 aaPredicted RBP33.9■■■■□ 3.02
GTPBP3-227ENST00000602056 ABCA3Q99758 1704 aa33.87■■■■□ 3.01
GTPBP3-227ENST00000602056 SEPT12Q8IYM1 358 aa33.86■■■■□ 3.01
GTPBP3-227ENST00000602056 NGDNQ8NEJ9 315 aaKnown RBP33.86■■■■□ 3.01
GTPBP3-227ENST00000602056 NUDT16Q96DE0 195 aaKnown RBP33.86■■■■□ 3.01
GTPBP3-227ENST00000602056 ONECUT3O60422 494 aaPredicted RBP33.85■■■■□ 3.01
GTPBP3-227ENST00000602056 ATP7BP35670 1465 aa33.84■■■■□ 3.01
GTPBP3-227ENST00000602056 CCDC125Q86Z20 511 aa33.84■■■■□ 3.01
GTPBP3-227ENST00000602056 ARHGEF28Q8N1W1 1705 aaKnown RBP33.84■■■■□ 3.01
GTPBP3-227ENST00000602056 NBPF1Q3BBV0 1214 aa33.83■■■■□ 3.01
GTPBP3-227ENST00000602056 ALS2Q96Q42 1657 aa33.83■■■■□ 3.01
GTPBP3-227ENST00000602056 CDK19Q9BWU1 502 aa33.82■■■■□ 3
GTPBP3-227ENST00000602056 PLCH1Q4KWH8 1693 aa33.82■■■■□ 3
GTPBP3-227ENST00000602056 EP400Q96L91 3159 aa33.81■■■■□ 3
GTPBP3-227ENST00000602056 CCDC9Q9Y3X0 531 aaKnown RBP33.81■■■■□ 3
GTPBP3-227ENST00000602056 NWD2Q9ULI1 1742 aa33.79■■■■□ 3
GTPBP3-227ENST00000602056 PAK3O75914 559 aaPredicted RBP33.79■■■■□ 3
GTPBP3-227ENST00000602056 BTG4Q9NY30 223 aa33.79■■■■□ 3
GTPBP3-227ENST00000602056 BLMP54132 1417 aaPredicted RBP33.74■■■□□ 2.99
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms