RNA–Protein interactions for RNA: ENST00000601373.5

IRF3-229, Transcript of interferon regulatory factor 3, humanhuman

TSL 2

Gene IRF3, Length 680 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-229ENST00000601373 SETD1AO15047 1707 aaKnown RBP18.83■□□□□ 0.6
IRF3-229ENST00000601373 SIRT1Q96EB6 747 aa18.82■□□□□ 0.6
IRF3-229ENST00000601373 QRICH2Q9H0J4 1663 aa18.82■□□□□ 0.6
IRF3-229ENST00000601373 POGKQ9P215 609 aa18.81■□□□□ 0.6
IRF3-229ENST00000601373 EVC2Q86UK5 1308 aa18.8■□□□□ 0.6
IRF3-229ENST00000601373 TBX22Q9Y458 520 aa18.8■□□□□ 0.6
IRF3-229ENST00000601373 ADAMTS13Q76LX8 1427 aa18.8■□□□□ 0.6
IRF3-229ENST00000601373 PRKRIP1Q9H875 184 aaPredicted RBP18.78■□□□□ 0.6
IRF3-229ENST00000601373 METP08581 1390 aa18.78■□□□□ 0.6
IRF3-229ENST00000601373 PRAM1Q96QH2 718 aa18.77■□□□□ 0.6
IRF3-229ENST00000601373 TECPR2O15040 1411 aa18.76■□□□□ 0.59
IRF3-229ENST00000601373 PANK3Q9H999 370 aa18.76■□□□□ 0.59
IRF3-229ENST00000601373 KTN1Q86UP2 1357 aaKnown RBP18.76■□□□□ 0.59
IRF3-229ENST00000601373 DIP2AQ14689 1571 aa18.76■□□□□ 0.59
IRF3-229ENST00000601373 FAM135BQ49AJ0 1406 aa18.75■□□□□ 0.59
IRF3-229ENST00000601373 PER1O15534 1290 aaPredicted RBP18.75■□□□□ 0.59
IRF3-229ENST00000601373 LRRC7Q96NW7 1537 aa18.74■□□□□ 0.59
IRF3-229ENST00000601373 KNDC1Q76NI1 1749 aa18.74■□□□□ 0.59
IRF3-229ENST00000601373 RALBP1Q15311 655 aa18.72■□□□□ 0.59
IRF3-229ENST00000601373 SLC26A8Q96RN1 970 aa18.72■□□□□ 0.59
IRF3-229ENST00000601373 PIK3R4Q99570 1358 aa18.71■□□□□ 0.59
IRF3-229ENST00000601373 SAFB2Q14151 953 aaKnown RBP eCLIP18.71■□□□□ 0.59
IRF3-229ENST00000601373 KNSTRNQ9Y448 316 aa18.7■□□□□ 0.58
IRF3-229ENST00000601373 MINK1Q8N4C8 1332 aaPredicted RBP18.7■□□□□ 0.58
IRF3-229ENST00000601373 TULP4Q9NRJ4 1543 aa18.69■□□□□ 0.58
IRF3-229ENST00000601373 NINLQ9Y2I6 1382 aa18.69■□□□□ 0.58
IRF3-229ENST00000601373 WAPLQ7Z5K2 1190 aa18.69■□□□□ 0.58
IRF3-229ENST00000601373 MYOM1P52179 1685 aa18.68■□□□□ 0.58
IRF3-229ENST00000601373 ATAD2Q6PL18 1390 aa18.68■□□□□ 0.58
IRF3-229ENST00000601373 SRPK2P78362 688 aaKnown RBP18.67■□□□□ 0.58
IRF3-229ENST00000601373 TMC1Q8TDI8 760 aa18.66■□□□□ 0.58
IRF3-229ENST00000601373 CDK19Q9BWU1 502 aa18.66■□□□□ 0.58
IRF3-229ENST00000601373 AMOTL2Q9Y2J4 779 aa18.66■□□□□ 0.58
IRF3-229ENST00000601373 NPC1L1Q9UHC9 1359 aa18.66■□□□□ 0.58
IRF3-229ENST00000601373 PLEKHH1Q9ULM0 1364 aa18.66■□□□□ 0.58
IRF3-229ENST00000601373 CABP2Q9NPB3 220 aa18.65■□□□□ 0.58
IRF3-229ENST00000601373 PTPRUQ92729 1446 aa18.65■□□□□ 0.58
IRF3-229ENST00000601373 STRCP1A6NGW2 1772 aa18.64■□□□□ 0.57
IRF3-229ENST00000601373 WASLO00401 505 aaPredicted RBP18.63■□□□□ 0.57
IRF3-229ENST00000601373 SLC12A5Q9H2X9 1139 aa18.63■□□□□ 0.57
IRF3-229ENST00000601373 PARD3Q8TEW0 1356 aa18.63■□□□□ 0.57
IRF3-229ENST00000601373 ROBO2Q9HCK4 1378 aa18.63■□□□□ 0.57
IRF3-229ENST00000601373 PTCH1Q13635 1447 aa18.63■□□□□ 0.57
IRF3-229ENST00000601373 MYBBP1AQ9BQG0 1328 aaKnown RBP18.62■□□□□ 0.57
IRF3-229ENST00000601373 CENPBP07199 599 aaPredicted RBP18.61■□□□□ 0.57
IRF3-229ENST00000601373 AMER1Q5JTC6 1135 aaPredicted RBP18.61■□□□□ 0.57
IRF3-229ENST00000601373 YTHDC1Q96MU7 727 aaKnown RBP18.61■□□□□ 0.57
IRF3-229ENST00000601373 RGS17Q9UGC6 210 aaPredicted RBP18.61■□□□□ 0.57
IRF3-229ENST00000601373 ANKRD36BQ8N2N9 1353 aa18.6■□□□□ 0.57
IRF3-229ENST00000601373 MRS2Q9HD23 443 aa18.6■□□□□ 0.57
IRF3-229ENST00000601373 CC2D1BQ5T0F9 858 aaKnown RBP18.59■□□□□ 0.57
IRF3-229ENST00000601373 CARD14Q9BXL6 1004 aa18.59■□□□□ 0.57
IRF3-229ENST00000601373 TERF2IPQ9NYB0 399 aa18.59■□□□□ 0.57
IRF3-229ENST00000601373 XRN1Q8IZH2 1706 aaKnown RBP18.58■□□□□ 0.57
IRF3-229ENST00000601373 CNGB1Q14028 1251 aaPredicted RBP18.58■□□□□ 0.56
IRF3-229ENST00000601373 BRD4O60885 1362 aaPredicted RBP18.57■□□□□ 0.56
IRF3-229ENST00000601373 ADGRB2O60241 1585 aa18.57■□□□□ 0.56
IRF3-229ENST00000601373 NLRP13Q86W25 1043 aa18.56■□□□□ 0.56
IRF3-229ENST00000601373 HDGFL2Q7Z4V5 671 aaPredicted RBP18.55■□□□□ 0.56
IRF3-229ENST00000601373 CHD2O14647 1828 aaKnown RBP18.55■□□□□ 0.56
IRF3-229ENST00000601373 KCNA6P17658 529 aa18.54■□□□□ 0.56
IRF3-229ENST00000601373 CCDC61Q9Y6R9 512 aa18.54■□□□□ 0.56
IRF3-229ENST00000601373 NSD3Q9BZ95 1437 aa18.54■□□□□ 0.56
IRF3-229ENST00000601373 CCDC184Q52MB2 194 aa18.53■□□□□ 0.56
IRF3-229ENST00000601373 NUDT16Q96DE0 195 aaKnown RBP18.53■□□□□ 0.56
IRF3-229ENST00000601373 CABP1Q9NZU7 370 aa18.53■□□□□ 0.56
IRF3-229ENST00000601373 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.53■□□□□ 0.56
IRF3-229ENST00000601373 USP32Q8NFA0 1604 aa18.52■□□□□ 0.56
IRF3-229ENST00000601373 CGNL1Q0VF96 1302 aa18.52■□□□□ 0.56
IRF3-229ENST00000601373 NSD2O96028 1365 aa18.52■□□□□ 0.55
IRF3-229ENST00000601373 ATP7BP35670 1465 aa18.52■□□□□ 0.55
IRF3-229ENST00000601373 A0A1W2PP64 1363 aa18.5■□□□□ 0.55
IRF3-229ENST00000601373 TMEM94Q12767 1356 aa18.5■□□□□ 0.55
IRF3-229ENST00000601373 XIRP1Q702N8 1843 aaKnown RBP18.49■□□□□ 0.55
IRF3-229ENST00000601373 PPIP5K1Q6PFW1 1433 aa18.49■□□□□ 0.55
IRF3-229ENST00000601373 CD163L1Q9NR16 1453 aa18.48■□□□□ 0.55
IRF3-229ENST00000601373 PPP2R1AP30153 589 aa18.48■□□□□ 0.55
IRF3-229ENST00000601373 POTEAQ6S8J7 498 aa18.48■□□□□ 0.55
IRF3-229ENST00000601373 ZNF692Q9BU19 519 aaPredicted RBP18.48■□□□□ 0.55
IRF3-229ENST00000601373 MORC1Q86VD1 984 aa18.47■□□□□ 0.55
IRF3-229ENST00000601373 PROSER2Q86WR7 435 aaPredicted RBP18.47■□□□□ 0.55
IRF3-229ENST00000601373 PNISRQ8TF01 805 aaKnown RBP18.47■□□□□ 0.55
IRF3-229ENST00000601373 PLEKHG3A1L390 1219 aa18.46■□□□□ 0.55
IRF3-229ENST00000601373 FAM9BQ8IZU0 186 aa18.46■□□□□ 0.55
IRF3-229ENST00000601373 NWD1Q149M9 1564 aa18.46■□□□□ 0.55
IRF3-229ENST00000601373 NKTRP30414 1462 aaKnown RBP18.46■□□□□ 0.54
IRF3-229ENST00000601373 CPSF1Q10570 1443 aaKnown RBP18.45■□□□□ 0.54
IRF3-229ENST00000601373 PRR36Q9H6K5 1346 aa18.45■□□□□ 0.54
IRF3-229ENST00000601373 ANKARQ7Z5J8 1434 aa18.44■□□□□ 0.54
IRF3-229ENST00000601373 MSH6P52701 1360 aa18.43■□□□□ 0.54
IRF3-229ENST00000601373 ROBO1Q9Y6N7 1651 aa18.43■□□□□ 0.54
IRF3-229ENST00000601373 CDC42BPGQ6DT37 1551 aa18.42■□□□□ 0.54
IRF3-229ENST00000601373 JCADQ9P266 1359 aa18.42■□□□□ 0.54
IRF3-229ENST00000601373 EDC4Q6P2E9 1401 aaKnown RBP18.41■□□□□ 0.54
IRF3-229ENST00000601373 SLAIN2Q9P270 581 aa18.41■□□□□ 0.54
IRF3-229ENST00000601373 ADGRL3Q9HAR2 1447 aa18.4■□□□□ 0.54
IRF3-229ENST00000601373 FYB1O15117 783 aa18.4■□□□□ 0.54
IRF3-229ENST00000601373 TOPAZ1Q8N9V7 1692 aa18.4■□□□□ 0.54
IRF3-229ENST00000601373 ITSN1Q15811 1721 aa18.39■□□□□ 0.53
IRF3-229ENST00000601373 INSRP06213 1382 aa18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms