RNA–Protein interactions for RNA: ENST00000600648.1

FARP1-231, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, human

TSL 5

Gene FARP1, Length 433 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FARP1-231	ENST00000600648	PLEKHH1	Q9ULM0	1364 aa		31.84	■■■□□ 2.69
FARP1-231	ENST00000600648	NUTM2F	A1L443	756 aa		31.84	■■■□□ 2.69
FARP1-231	ENST00000600648	ESCO1	Q5FWF5	840 aa		31.84	■■■□□ 2.69
FARP1-231	ENST00000600648	TECPR2	O15040	1411 aa		31.83	■■■□□ 2.69
FARP1-231	ENST00000600648	ABCC11	Q96J66	1382 aa		31.82	■■■□□ 2.69
FARP1-231	ENST00000600648	AFF2	P51816	1311 aa		31.82	■■■□□ 2.68
FARP1-231	ENST00000600648	CDC42BPG	Q6DT37	1551 aa		31.81	■■■□□ 2.68
FARP1-231	ENST00000600648	SOS2	Q07890	1332 aa	Predicted RBP	31.81	■■■□□ 2.68
FARP1-231	ENST00000600648	C8orf37	Q96NL8	207 aa		31.81	■■■□□ 2.68
FARP1-231	ENST00000600648	YTHDC2	Q9H6S0	1430 aa	Known RBP	31.81	■■■□□ 2.68
FARP1-231	ENST00000600648	CFAP70	Q5T0N1	1121 aa		31.8	■■■□□ 2.68
FARP1-231	ENST00000600648	C14orf93	Q9H972	538 aa	Known RBP	31.79	■■■□□ 2.68
FARP1-231	ENST00000600648	ADAMTS2	O95450	1211 aa		31.78	■■■□□ 2.68
FARP1-231	ENST00000600648	LAMC1	P11047	1609 aa		31.78	■■■□□ 2.68
FARP1-231	ENST00000600648	KNDC1	Q76NI1	1749 aa		31.75	■■■□□ 2.67
FARP1-231	ENST00000600648	RXRB	P28702	533 aa		31.75	■■■□□ 2.67
FARP1-231	ENST00000600648	XPC	Q01831	940 aa	Predicted RBP	31.75	■■■□□ 2.67
FARP1-231	ENST00000600648	MYOM2	P54296	1465 aa		31.74	■■■□□ 2.67
FARP1-231	ENST00000600648	NRXN1	Q9ULB1	1477 aa		31.74	■■■□□ 2.67
FARP1-231	ENST00000600648	FOXO3	O43524	673 aa		31.73	■■■□□ 2.67
FARP1-231	ENST00000600648	NPHP3	Q7Z494	1330 aa		31.73	■■■□□ 2.67
FARP1-231	ENST00000600648	DHX57	Q6P158	1386 aa	Known RBP	31.71	■■■□□ 2.67
FARP1-231	ENST00000600648	NGLY1	Q96IV0	654 aa		31.71	■■■□□ 2.67
FARP1-231	ENST00000600648	SAFB2	Q14151	953 aa	Known RBP eCLIP	31.7	■■■□□ 2.67
FARP1-231	ENST00000600648	KDM2A	Q9Y2K7	1162 aa		31.69	■■■□□ 2.66
FARP1-231	ENST00000600648	QTRT2	Q9H974	415 aa	Known RBP	31.67	■■■□□ 2.66
FARP1-231	ENST00000600648	SIRT1	Q96EB6	747 aa		31.66	■■■□□ 2.66
FARP1-231	ENST00000600648	PRAM1	Q96QH2	718 aa		31.66	■■■□□ 2.66
FARP1-231	ENST00000600648	PXDN	Q92626	1479 aa		31.65	■■■□□ 2.66
FARP1-231	ENST00000600648	DCAF11	Q8TEB1	546 aa		31.64	■■■□□ 2.66
FARP1-231	ENST00000600648	FMN2	Q9NZ56	1722 aa		31.63	■■■□□ 2.65
FARP1-231	ENST00000600648	HRC	P23327	699 aa		31.61	■■■□□ 2.65
FARP1-231	ENST00000600648	POGK	Q9P215	609 aa		31.61	■■■□□ 2.65
FARP1-231	ENST00000600648	RBM6	P78332	1123 aa	Known RBP	31.59	■■■□□ 2.65
FARP1-231	ENST00000600648	USP21	Q9UK80	565 aa		31.58	■■■□□ 2.65
FARP1-231	ENST00000600648	TRAK1	Q9UPV9	953 aa		31.58	■■■□□ 2.65
FARP1-231	ENST00000600648	COL22A1	Q8NFW1	1626 aa	Predicted RBP	31.57	■■■□□ 2.64
FARP1-231	ENST00000600648	CDK12	Q9NYV4	1490 aa	Predicted RBP	31.57	■■■□□ 2.64
FARP1-231	ENST00000600648	KRT28	Q7Z3Y7	464 aa		31.55	■■■□□ 2.64
FARP1-231	ENST00000600648	UPF1	Q92900	1129 aa	Known RBP eCLIP	31.55	■■■□□ 2.64
FARP1-231	ENST00000600648	PHF8	Q9UPP1	1060 aa		31.55	■■■□□ 2.64
FARP1-231	ENST00000600648	ADGRB1	O14514	1584 aa		31.54	■■■□□ 2.64
FARP1-231	ENST00000600648	RGS12	O14924	1447 aa		31.53	■■■□□ 2.64
FARP1-231	ENST00000600648	KIF1A	Q12756	1690 aa		31.52	■■■□□ 2.64
FARP1-231	ENST00000600648	FNBP4	Q8N3X1	1017 aa	Predicted RBP	31.52	■■■□□ 2.64
FARP1-231	ENST00000600648	HIRIP3	Q9BW71	556 aa	Predicted RBP	31.52	■■■□□ 2.64
FARP1-231	ENST00000600648	DLC1	Q96QB1	1528 aa		31.52	■■■□□ 2.64
FARP1-231	ENST00000600648	SPATA31A3	Q5VYP0	1347 aa		31.51	■■■□□ 2.64
FARP1-231	ENST00000600648	RGPD8	O14715	1765 aa	Predicted RBP	31.51	■■■□□ 2.64
FARP1-231	ENST00000600648	PLEKHG5	O94827	1062 aa		31.5	■■■□□ 2.63
FARP1-231	ENST00000600648	MINK1	Q8N4C8	1332 aa	Predicted RBP	31.49	■■■□□ 2.63
FARP1-231	ENST00000600648	TRPC5	Q9UL62	973 aa	Predicted RBP	31.49	■■■□□ 2.63
FARP1-231	ENST00000600648	PMFBP1	Q8TBY8	1022 aa		31.47	■■■□□ 2.63
FARP1-231	ENST00000600648	STAC3	Q96MF2	364 aa		31.45	■■■□□ 2.63
FARP1-231	ENST00000600648	PSME1	Q06323	249 aa		31.44	■■■□□ 2.62
FARP1-231	ENST00000600648	LMOD2	Q6P5Q4	547 aa		31.44	■■■□□ 2.62
FARP1-231	ENST00000600648	ATRN	O75882	1429 aa		31.42	■■■□□ 2.62
FARP1-231	ENST00000600648	TNS3	Q68CZ2	1445 aa		31.41	■■■□□ 2.62
FARP1-231	ENST00000600648	HAP1	P54257	671 aa	Predicted RBP	31.41	■■■□□ 2.62
FARP1-231	ENST00000600648	CABLES1	Q8TDN4	633 aa		31.41	■■■□□ 2.62
FARP1-231	ENST00000600648	ANKAR	Q7Z5J8	1434 aa		31.41	■■■□□ 2.62
FARP1-231	ENST00000600648	BCL9L	Q86UU0	1499 aa		31.4	■■■□□ 2.62
FARP1-231	ENST00000600648	ADGRB2	O60241	1585 aa		31.4	■■■□□ 2.62
FARP1-231	ENST00000600648	USP32	Q8NFA0	1604 aa		31.4	■■■□□ 2.62
FARP1-231	ENST00000600648	MARF1	Q9Y4F3	1742 aa	Known RBP	31.39	■■■□□ 2.62
FARP1-231	ENST00000600648	PRR36	Q9H6K5	1346 aa		31.37	■■■□□ 2.61
FARP1-231	ENST00000600648	SBNO1	A3KN83	1393 aa		31.36	■■■□□ 2.61
FARP1-231	ENST00000600648	WASL	O00401	505 aa	Predicted RBP	31.36	■■■□□ 2.61
FARP1-231	ENST00000600648	EIF3A	Q14152	1382 aa	Known RBP	31.32	■■■□□ 2.6
FARP1-231	ENST00000600648	TULP4	Q9NRJ4	1543 aa		31.31	■■■□□ 2.6
FARP1-231	ENST00000600648	UNC5CL	Q8IV45	518 aa		31.31	■■■□□ 2.6
FARP1-231	ENST00000600648	GJD4	Q96KN9	370 aa	Predicted RBP	31.31	■■■□□ 2.6
FARP1-231	ENST00000600648	ARHGEF10	O15013	1369 aa		31.3	■■■□□ 2.6
FARP1-231	ENST00000600648	ARHGEF28	Q8N1W1	1705 aa	Known RBP	31.29	■■■□□ 2.6
FARP1-231	ENST00000600648	SLIT2	O94813	1529 aa		31.29	■■■□□ 2.6
FARP1-231	ENST00000600648	GPRASP1	Q5JY77	1395 aa		31.29	■■■□□ 2.6
FARP1-231	ENST00000600648	ATAD2	Q6PL18	1390 aa		31.29	■■■□□ 2.6
FARP1-231	ENST00000600648	NGDN	Q8NEJ9	315 aa	Known RBP	31.28	■■■□□ 2.6
FARP1-231	ENST00000600648	NBPF1	Q3BBV0	1214 aa		31.26	■■■□□ 2.59
FARP1-231	ENST00000600648	NUDT16	Q96DE0	195 aa	Known RBP	31.24	■■■□□ 2.59
FARP1-231	ENST00000600648	RALGAPB	Q86X10	1494 aa		31.23	■■■□□ 2.59
FARP1-231	ENST00000600648	PAK3	O75914	559 aa	Predicted RBP	31.23	■■■□□ 2.59
FARP1-231	ENST00000600648	TNKS1BP1	Q9C0C2	1729 aa	Known RBP	31.22	■■■□□ 2.59
FARP1-231	ENST00000600648	CDK19	Q9BWU1	502 aa		31.22	■■■□□ 2.59
FARP1-231	ENST00000600648	ABCA3	Q99758	1704 aa		31.21	■■■□□ 2.59
FARP1-231	ENST00000600648	TRPM3	Q9HCF6	1732 aa	Predicted RBP	31.21	■■■□□ 2.59
FARP1-231	ENST00000600648	FAM83G	A6ND36	823 aa		31.2	■■■□□ 2.59
FARP1-231	ENST00000600648	CCDC9	Q9Y3X0	531 aa	Known RBP	31.2	■■■□□ 2.59
FARP1-231	ENST00000600648	ATP7B	P35670	1465 aa		31.2	■■■□□ 2.58
FARP1-231	ENST00000600648	GLI3	P10071	1580 aa		31.19	■■■□□ 2.58
FARP1-231	ENST00000600648	KIAA1210	Q9ULL0	1709 aa		31.18	■■■□□ 2.58
FARP1-231	ENST00000600648	PLCH1	Q4KWH8	1693 aa		31.16	■■■□□ 2.58
FARP1-231	ENST00000600648	VPS72	Q15906	364 aa		31.16	■■■□□ 2.58
FARP1-231	ENST00000600648	SIN3A	Q96ST3	1273 aa		31.16	■■■□□ 2.58
FARP1-231	ENST00000600648	ALS2	Q96Q42	1657 aa		31.16	■■■□□ 2.58
FARP1-231	ENST00000600648	L3MBTL2	Q969R5	705 aa		31.14	■■■□□ 2.58
FARP1-231	ENST00000600648	EP400	Q96L91	3159 aa		31.13	■■■□□ 2.57
FARP1-231	ENST00000600648	ITSN1	Q15811	1721 aa		31.12	■■■□□ 2.57
FARP1-231	ENST00000600648	NEUROD1	Q13562	356 aa		31.11	■■■□□ 2.57
FARP1-231	ENST00000600648	SEPT12	Q8IYM1	358 aa		31.11	■■■□□ 2.57

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