RNA–Protein interactions for RNA: ENST00000600190.1

FARP1-229, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 3

Gene FARP1, Length 566 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-229ENST00000600190 STK26Q9P289 416 aa28.1■■■□□ 2.09
FARP1-229ENST00000600190 RBM6P78332 1123 aaKnown RBP28.09■■■□□ 2.09
FARP1-229ENST00000600190 ESCO1Q5FWF5 840 aa28.09■■■□□ 2.09
FARP1-229ENST00000600190 SPATA31E1Q6ZUB1 1445 aa28.05■■■□□ 2.08
FARP1-229ENST00000600190 WAPLQ7Z5K2 1190 aa28.05■■■□□ 2.08
FARP1-229ENST00000600190 ANKRD30BQ9BXX2 1392 aa28.04■■■□□ 2.08
FARP1-229ENST00000600190 TMEM132EQ6IEE7 984 aa28.03■■■□□ 2.08
FARP1-229ENST00000600190 RGS12O14924 1447 aa28.02■■■□□ 2.08
FARP1-229ENST00000600190 NPHP3Q7Z494 1330 aa28.02■■■□□ 2.08
FARP1-229ENST00000600190 NUTM2FA1L443 756 aa28.02■■■□□ 2.08
FARP1-229ENST00000600190 USP21Q9UK80 565 aa28.02■■■□□ 2.08
FARP1-229ENST00000600190 CDC42BPGQ6DT37 1551 aa28.02■■■□□ 2.08
FARP1-229ENST00000600190 FOXO3O43524 673 aa28■■■□□ 2.07
FARP1-229ENST00000600190 XPCQ01831 940 aaPredicted RBP28■■■□□ 2.07
FARP1-229ENST00000600190 IFT172Q9UG01 1749 aa28■■■□□ 2.07
FARP1-229ENST00000600190 LRPPRCP42704 1394 aaKnown RBP27.99■■■□□ 2.07
FARP1-229ENST00000600190 TECPR2O15040 1411 aa27.98■■■□□ 2.07
FARP1-229ENST00000600190 ABCC11Q96J66 1382 aa27.97■■■□□ 2.07
FARP1-229ENST00000600190 PLEKHH1Q9ULM0 1364 aa27.97■■■□□ 2.07
FARP1-229ENST00000600190 FNBP4Q8N3X1 1017 aaPredicted RBP27.96■■■□□ 2.07
FARP1-229ENST00000600190 TRPC5Q9UL62 973 aaPredicted RBP27.96■■■□□ 2.07
FARP1-229ENST00000600190 COL22A1Q8NFW1 1626 aaPredicted RBP27.96■■■□□ 2.07
FARP1-229ENST00000600190 PIK3C2GO75747 1445 aa27.95■■■□□ 2.07
FARP1-229ENST00000600190 PXDNQ92626 1479 aa27.95■■■□□ 2.06
FARP1-229ENST00000600190 YTHDC2Q9H6S0 1430 aaKnown RBP27.92■■■□□ 2.06
FARP1-229ENST00000600190 MYOM2P54296 1465 aa27.91■■■□□ 2.06
FARP1-229ENST00000600190 KNDC1Q76NI1 1749 aa27.91■■■□□ 2.06
FARP1-229ENST00000600190 ACIN1Q9UKV3 1341 aaKnown RBP27.89■■■□□ 2.05
FARP1-229ENST00000600190 C14orf93Q9H972 538 aaKnown RBP27.88■■■□□ 2.05
FARP1-229ENST00000600190 ATRNO75882 1429 aa27.86■■■□□ 2.05
FARP1-229ENST00000600190 CFAP70Q5T0N1 1121 aa27.86■■■□□ 2.05
FARP1-229ENST00000600190 FMN2Q9NZ56 1722 aa27.86■■■□□ 2.05
FARP1-229ENST00000600190 SIRT1Q96EB6 747 aa27.85■■■□□ 2.05
FARP1-229ENST00000600190 ATAD2Q6PL18 1390 aa27.85■■■□□ 2.05
FARP1-229ENST00000600190 DHX57Q6P158 1386 aaKnown RBP27.84■■■□□ 2.05
FARP1-229ENST00000600190 MARF1Q9Y4F3 1742 aaKnown RBP27.84■■■□□ 2.05
FARP1-229ENST00000600190 BCL9LQ86UU0 1499 aa27.83■■■□□ 2.05
FARP1-229ENST00000600190 KRT28Q7Z3Y7 464 aa27.83■■■□□ 2.05
FARP1-229ENST00000600190 SPATA31A3Q5VYP0 1347 aa27.82■■■□□ 2.04
FARP1-229ENST00000600190 SAFB2Q14151 953 aaKnown RBP eCLIP27.81■■■□□ 2.04
FARP1-229ENST00000600190 KIF1AQ12756 1690 aa27.81■■■□□ 2.04
FARP1-229ENST00000600190 NRXN1Q9ULB1 1477 aa27.8■■■□□ 2.04
FARP1-229ENST00000600190 PRAM1Q96QH2 718 aa27.79■■■□□ 2.04
FARP1-229ENST00000600190 PHF8Q9UPP1 1060 aa27.79■■■□□ 2.04
FARP1-229ENST00000600190 EP400Q96L91 3159 aa27.78■■■□□ 2.04
FARP1-229ENST00000600190 GJD4Q96KN9 370 aaPredicted RBP27.78■■■□□ 2.04
FARP1-229ENST00000600190 RGPD8O14715 1765 aaPredicted RBP27.78■■■□□ 2.04
FARP1-229ENST00000600190 RAB3GAP2Q9H2M9 1393 aa27.77■■■□□ 2.04
FARP1-229ENST00000600190 PLEKHG5O94827 1062 aa27.76■■■□□ 2.03
FARP1-229ENST00000600190 PSME1Q06323 249 aa27.76■■■□□ 2.03
FARP1-229ENST00000600190 POGKQ9P215 609 aa27.76■■■□□ 2.03
FARP1-229ENST00000600190 HAP1P54257 671 aaPredicted RBP27.75■■■□□ 2.03
FARP1-229ENST00000600190 UNC5CLQ8IV45 518 aa27.74■■■□□ 2.03
FARP1-229ENST00000600190 LMOD2Q6P5Q4 547 aa27.72■■■□□ 2.03
FARP1-229ENST00000600190 CABLES1Q8TDN4 633 aa27.72■■■□□ 2.03
FARP1-229ENST00000600190 SRCAPQ6ZRS2 3230 aa27.71■■■□□ 2.03
FARP1-229ENST00000600190 TNS3Q68CZ2 1445 aa27.7■■■□□ 2.03
FARP1-229ENST00000600190 SLIT2O94813 1529 aa27.7■■■□□ 2.02
FARP1-229ENST00000600190 PMFBP1Q8TBY8 1022 aa27.69■■■□□ 2.02
FARP1-229ENST00000600190 KDM2AQ9Y2K7 1162 aa27.69■■■□□ 2.02
FARP1-229ENST00000600190 TNKS1BP1Q9C0C2 1729 aaKnown RBP27.69■■■□□ 2.02
FARP1-229ENST00000600190 USP32Q8NFA0 1604 aa27.68■■■□□ 2.02
FARP1-229ENST00000600190 TRAK1Q9UPV9 953 aa27.68■■■□□ 2.02
FARP1-229ENST00000600190 RALGAPBQ86X10 1494 aa27.67■■■□□ 2.02
FARP1-229ENST00000600190 DLC1Q96QB1 1528 aa27.67■■■□□ 2.02
FARP1-229ENST00000600190 SBNO1A3KN83 1393 aa27.66■■■□□ 2.02
FARP1-229ENST00000600190 HIRIP3Q9BW71 556 aaPredicted RBP27.66■■■□□ 2.02
FARP1-229ENST00000600190 CCDC125Q86Z20 511 aa27.65■■■□□ 2.02
FARP1-229ENST00000600190 DCAF11Q8TEB1 546 aa27.65■■■□□ 2.02
FARP1-229ENST00000600190 GLI3P10071 1580 aa27.65■■■□□ 2.02
FARP1-229ENST00000600190 ARHGEF10O15013 1369 aa27.63■■■□□ 2.01
FARP1-229ENST00000600190 ADGRB1O14514 1584 aa27.62■■■□□ 2.01
FARP1-229ENST00000600190 ANKARQ7Z5J8 1434 aa27.62■■■□□ 2.01
FARP1-229ENST00000600190 MINK1Q8N4C8 1332 aaPredicted RBP27.62■■■□□ 2.01
FARP1-229ENST00000600190 ZRANB1Q9UGI0 708 aa27.61■■■□□ 2.01
FARP1-229ENST00000600190 CCDC9Q9Y3X0 531 aaKnown RBP27.61■■■□□ 2.01
FARP1-229ENST00000600190 VPS72Q15906 364 aa27.59■■■□□ 2.01
FARP1-229ENST00000600190 ADGRB2O60241 1585 aa27.59■■■□□ 2.01
FARP1-229ENST00000600190 PLCH1Q4KWH8 1693 aa27.57■■■□□ 2
FARP1-229ENST00000600190 FAM83GA6ND36 823 aa27.57■■■□□ 2
FARP1-229ENST00000600190 SEPT12Q8IYM1 358 aa27.57■■■□□ 2
FARP1-229ENST00000600190 ABCA3Q99758 1704 aa27.56■■■□□ 2
FARP1-229ENST00000600190 GPRASP1Q5JY77 1395 aa27.55■■■□□ 2
FARP1-229ENST00000600190 NWD2Q9ULI1 1742 aa27.55■■■□□ 2
FARP1-229ENST00000600190 BRWD3Q6RI45 1802 aa27.55■■■□□ 2
FARP1-229ENST00000600190 WASLO00401 505 aaPredicted RBP27.54■■■□□ 2
FARP1-229ENST00000600190 EIF3AQ14152 1382 aaKnown RBP27.54■■■□□ 2
FARP1-229ENST00000600190 PRR36Q9H6K5 1346 aa27.54■■■□□ 2
FARP1-229ENST00000600190 STAC3Q96MF2 364 aa27.53■■■□□ 2
FARP1-229ENST00000600190 BLMP54132 1417 aaPredicted RBP27.51■■□□□ 1.99
FARP1-229ENST00000600190 TRPM3Q9HCF6 1732 aaPredicted RBP27.51■■□□□ 1.99
FARP1-229ENST00000600190 NGDNQ8NEJ9 315 aaKnown RBP27.51■■□□□ 1.99
FARP1-229ENST00000600190 TULP4Q9NRJ4 1543 aa27.51■■□□□ 1.99
FARP1-229ENST00000600190 ONECUT3O60422 494 aaPredicted RBP27.5■■□□□ 1.99
FARP1-229ENST00000600190 A0A0G2JS52 829 aa27.49■■□□□ 1.99
FARP1-229ENST00000600190 PAK3O75914 559 aaPredicted RBP27.49■■□□□ 1.99
FARP1-229ENST00000600190 HRCP23327 699 aa27.49■■□□□ 1.99
FARP1-229ENST00000600190 MYT1Q01538 1121 aa27.49■■□□□ 1.99
FARP1-229ENST00000600190 BTG4Q9NY30 223 aa27.49■■□□□ 1.99
FARP1-229ENST00000600190 SF3B2Q13435 895 aaKnown RBP27.48■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms