RNA–Protein interactions for RNA: ENST00000599966.5

PPFIA4-210, Transcript of PTPRF interacting protein alpha 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PPFIA4, Length 3,178 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA4-210ENST00000599966 ZNF521Q96K83 1311 aa16.23■□□□□ 0.19
PPFIA4-210ENST00000599966 MFAP1P55081 439 aaKnown RBP16.22■□□□□ 0.19
PPFIA4-210ENST00000599966 ZMYM4Q5VZL5 1548 aa16.22■□□□□ 0.19
PPFIA4-210ENST00000599966 E9PSI1 815 aa16.22■□□□□ 0.19
PPFIA4-210ENST00000599966 NPM1P06748 294 aaKnown RBP eCLIP16.22■□□□□ 0.19
PPFIA4-210ENST00000599966 FBLN1P23142 703 aa16.22■□□□□ 0.19
PPFIA4-210ENST00000599966 MAST1Q9Y2H9 1570 aa16.22■□□□□ 0.19
PPFIA4-210ENST00000599966 EIF3AQ14152 1382 aaKnown RBP16.22■□□□□ 0.19
PPFIA4-210ENST00000599966 TSR2Q969E8 191 aaKnown RBP16.21■□□□□ 0.19
PPFIA4-210ENST00000599966 GGNBP2Q9H3C7 697 aa16.21■□□□□ 0.19
PPFIA4-210ENST00000599966 MYO5CQ9NQX4 1742 aa16.21■□□□□ 0.18
PPFIA4-210ENST00000599966 NOS1P29475 1434 aa16.2■□□□□ 0.18
PPFIA4-210ENST00000599966 GAS2L3Q86XJ1 694 aa16.2■□□□□ 0.18
PPFIA4-210ENST00000599966 UNC13BO14795 1591 aa16.2■□□□□ 0.18
PPFIA4-210ENST00000599966 FANCAO15360 1455 aa16.2■□□□□ 0.18
PPFIA4-210ENST00000599966 RLBP1P12271 317 aa16.2■□□□□ 0.18
PPFIA4-210ENST00000599966 SRPK2P78362 688 aaKnown RBP16.2■□□□□ 0.18
PPFIA4-210ENST00000599966 NSD3Q9BZ95 1437 aa16.19■□□□□ 0.18
PPFIA4-210ENST00000599966 ZBTB7CA1YPR0 619 aa16.19■□□□□ 0.18
PPFIA4-210ENST00000599966 IQGAP3Q86VI3 1631 aa16.19■□□□□ 0.18
PPFIA4-210ENST00000599966 KIAA1211Q6ZU35 1233 aa16.19■□□□□ 0.18
PPFIA4-210ENST00000599966 ASXL1Q8IXJ9 1541 aa16.19■□□□□ 0.18
PPFIA4-210ENST00000599966 MRE11P49959 708 aa16.18■□□□□ 0.18
PPFIA4-210ENST00000599966 TBC1D32Q96NH3 1257 aa16.17■□□□□ 0.18
PPFIA4-210ENST00000599966 MINK1Q8N4C8 1332 aaPredicted RBP16.17■□□□□ 0.18
PPFIA4-210ENST00000599966 PDZRN3Q9UPQ7 1066 aa16.17■□□□□ 0.18
PPFIA4-210ENST00000599966 ADGRL1O94910 1474 aa16.17■□□□□ 0.18
PPFIA4-210ENST00000599966 FAM13BQ9NYF5 915 aa16.16■□□□□ 0.18
PPFIA4-210ENST00000599966 PCDHB15Q9Y5E8 787 aa16.16■□□□□ 0.18
PPFIA4-210ENST00000599966 CLTCL1P53675 1640 aa16.14■□□□□ 0.18
PPFIA4-210ENST00000599966 ZCCHC11Q5TAX3 1644 aaKnown RBP16.14■□□□□ 0.18
PPFIA4-210ENST00000599966 PLPPR3Q6T4P5 718 aa16.14■□□□□ 0.17
PPFIA4-210ENST00000599966 ABCC1P33527 1531 aa16.14■□□□□ 0.17
PPFIA4-210ENST00000599966 EIF2AK4Q9P2K8 1649 aaKnown RBP16.14■□□□□ 0.17
PPFIA4-210ENST00000599966 RUNDC1Q96C34 613 aa16.13■□□□□ 0.17
PPFIA4-210ENST00000599966 NKTRP30414 1462 aaKnown RBP16.13■□□□□ 0.17
PPFIA4-210ENST00000599966 ERVK-7P63135 1459 aa16.13■□□□□ 0.17
PPFIA4-210ENST00000599966 RARSP54136 660 aaKnown RBP16.13■□□□□ 0.17
PPFIA4-210ENST00000599966 TRMT2AQ8IZ69 625 aaKnown RBP16.13■□□□□ 0.17
PPFIA4-210ENST00000599966 CHMP5Q9NZZ3 219 aa16.13■□□□□ 0.17
PPFIA4-210ENST00000599966 MAPK8IP3Q9UPT6 1336 aa16.13■□□□□ 0.17
PPFIA4-210ENST00000599966 CFAP53Q96M91 514 aa16.12■□□□□ 0.17
PPFIA4-210ENST00000599966 MADDQ8WXG6 1647 aa16.12■□□□□ 0.17
PPFIA4-210ENST00000599966 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.12■□□□□ 0.17
PPFIA4-210ENST00000599966 FTSJ3Q8IY81 847 aaKnown RBP16.12■□□□□ 0.17
PPFIA4-210ENST00000599966 PLXNC1O60486 1568 aa16.11■□□□□ 0.17
PPFIA4-210ENST00000599966 PRDM10Q9NQV6 1147 aa16.11■□□□□ 0.17
PPFIA4-210ENST00000599966 C22orf23Q9BZE7 217 aa16.11■□□□□ 0.17
PPFIA4-210ENST00000599966 ELL2O00472 640 aaPredicted RBP16.1■□□□□ 0.17
PPFIA4-210ENST00000599966 MLECQ14165 292 aa16.1■□□□□ 0.17
PPFIA4-210ENST00000599966 NLRP1Q9C000 1473 aa16.1■□□□□ 0.17
PPFIA4-210ENST00000599966 STAG3Q9UJ98 1225 aa16.1■□□□□ 0.17
PPFIA4-210ENST00000599966 PIK3C2GO75747 1445 aa16.1■□□□□ 0.17
PPFIA4-210ENST00000599966 PDCL3Q9H2J4 239 aa16.09■□□□□ 0.17
PPFIA4-210ENST00000599966 PTPRTO14522 1441 aa16.09■□□□□ 0.17
PPFIA4-210ENST00000599966 SMC4Q9NTJ3 1288 aa16.09■□□□□ 0.17
PPFIA4-210ENST00000599966 R3HCC1Q9Y3T6 440 aaKnown RBP16.09■□□□□ 0.17
PPFIA4-210ENST00000599966 EXOSC9Q06265 439 aaKnown RBP16.08■□□□□ 0.17
PPFIA4-210ENST00000599966 CGNL1Q0VF96 1302 aa16.08■□□□□ 0.17
PPFIA4-210ENST00000599966 C14orf93Q9H972 538 aaKnown RBP16.08■□□□□ 0.16
PPFIA4-210ENST00000599966 ZFYVE16Q7Z3T8 1539 aa16.08■□□□□ 0.16
PPFIA4-210ENST00000599966 ITPRIPQ8IWB1 547 aa16.08■□□□□ 0.16
PPFIA4-210ENST00000599966 TRPM2O94759 1503 aa16.07■□□□□ 0.16
PPFIA4-210ENST00000599966 ASXL2Q76L83 1435 aa16.07■□□□□ 0.16
PPFIA4-210ENST00000599966 IDI1Q13907 227 aa16.07■□□□□ 0.16
PPFIA4-210ENST00000599966 ATP7AQ04656 1500 aa16.07■□□□□ 0.16
PPFIA4-210ENST00000599966 TNPO1Q92973 898 aaKnown RBP16.06■□□□□ 0.16
PPFIA4-210ENST00000599966 FBXO31Q5XUX0 539 aaPredicted RBP16.06■□□□□ 0.16
PPFIA4-210ENST00000599966 HSCBQ8IWL3 235 aa16.06■□□□□ 0.16
PPFIA4-210ENST00000599966 THUMPD2Q9BTF0 503 aaKnown RBP16.06■□□□□ 0.16
PPFIA4-210ENST00000599966 ZHX1Q9UKY1 873 aaPredicted RBP16.06■□□□□ 0.16
PPFIA4-210ENST00000599966 STAC3Q96MF2 364 aa16.05■□□□□ 0.16
PPFIA4-210ENST00000599966 UHRF1BP1LA0JNW5 1464 aa16.05■□□□□ 0.16
PPFIA4-210ENST00000599966 PRAM1Q96QH2 718 aa16.05■□□□□ 0.16
PPFIA4-210ENST00000599966 TPM2P07951 284 aa16.04■□□□□ 0.16
PPFIA4-210ENST00000599966 NCLP19338 710 aaKnown RBP16.04■□□□□ 0.16
PPFIA4-210ENST00000599966 RIPK4P57078 832 aa16.04■□□□□ 0.16
PPFIA4-210ENST00000599966 PDE3AQ14432 1141 aa16.04■□□□□ 0.16
PPFIA4-210ENST00000599966 EVC2Q86UK5 1308 aa16.04■□□□□ 0.16
PPFIA4-210ENST00000599966 RTEL1-TNFRSF6BF6WH68 1400 aa16.04■□□□□ 0.16
PPFIA4-210ENST00000599966 HMOX1P09601 288 aa16.04■□□□□ 0.16
PPFIA4-210ENST00000599966 PRDM4Q9UKN5 801 aa16.03■□□□□ 0.16
PPFIA4-210ENST00000599966 DDX11L8A8MPP1 907 aa16.02■□□□□ 0.16
PPFIA4-210ENST00000599966 XPCQ01831 940 aaPredicted RBP16.02■□□□□ 0.16
PPFIA4-210ENST00000599966 INSRP06213 1382 aa16.02■□□□□ 0.15
PPFIA4-210ENST00000599966 NUTM2FA1L443 756 aa16.01■□□□□ 0.15
PPFIA4-210ENST00000599966 HSP90AB1P08238 724 aaKnown RBP16.01■□□□□ 0.15
PPFIA4-210ENST00000599966 MSNP26038 577 aaKnown RBP16.01■□□□□ 0.15
PPFIA4-210ENST00000599966 SYNMO15061 1565 aa16.01■□□□□ 0.15
PPFIA4-210ENST00000599966 SOX12O15370 315 aa16.01■□□□□ 0.15
PPFIA4-210ENST00000599966 VGFO15240 615 aaPredicted RBP16.01■□□□□ 0.15
PPFIA4-210ENST00000599966 WAPLQ7Z5K2 1190 aa16.01■□□□□ 0.15
PPFIA4-210ENST00000599966 SSH1Q8WYL5 1049 aa16.01■□□□□ 0.15
PPFIA4-210ENST00000599966 CABP1Q9NZU7 370 aa16.01■□□□□ 0.15
PPFIA4-210ENST00000599966 SPHKAPQ2M3C7 1700 aa16■□□□□ 0.15
PPFIA4-210ENST00000599966 NPATQ14207 1427 aa16■□□□□ 0.15
PPFIA4-210ENST00000599966 RNF17Q9BXT8 1623 aaKnown RBP16■□□□□ 0.15
PPFIA4-210ENST00000599966 NASPP49321 788 aaPredicted RBP16■□□□□ 0.15
PPFIA4-210ENST00000599966 C1orf115Q9H7X2 142 aa16■□□□□ 0.15
PPFIA4-210ENST00000599966 IQGAP1P46940 1657 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms