RNA–Protein interactions for RNA: ENST00000598359.5

SCAF1-203, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 662 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-203ENST00000598359 TECPR2O15040 1411 aa20.2■□□□□ 0.82
SCAF1-203ENST00000598359 SHPRHQ149N8 1683 aa20.2■□□□□ 0.82
SCAF1-203ENST00000598359 MEX3CQ5U5Q3 659 aaKnown RBP20.2■□□□□ 0.82
SCAF1-203ENST00000598359 C14orf93Q9H972 538 aaKnown RBP20.2■□□□□ 0.82
SCAF1-203ENST00000598359 ABCC11Q96J66 1382 aa20.2■□□□□ 0.82
SCAF1-203ENST00000598359 NUTM2BA6NNL0 878 aaPredicted RBP20.19■□□□□ 0.82
SCAF1-203ENST00000598359 NUTM2EB1AL46 878 aaPredicted RBP20.19■□□□□ 0.82
SCAF1-203ENST00000598359 NUTM2AQ8IVF1 878 aaPredicted RBP20.19■□□□□ 0.82
SCAF1-203ENST00000598359 KDM2AQ9Y2K7 1162 aa20.19■□□□□ 0.82
SCAF1-203ENST00000598359 SPATA31A6Q5VVP1 1343 aa20.19■□□□□ 0.82
SCAF1-203ENST00000598359 NUTM2FA1L443 756 aa20.18■□□□□ 0.82
SCAF1-203ENST00000598359 KNDC1Q76NI1 1749 aa20.18■□□□□ 0.82
SCAF1-203ENST00000598359 CDC42BPGQ6DT37 1551 aa20.17■□□□□ 0.82
SCAF1-203ENST00000598359 DCAF11Q8TEB1 546 aa20.16■□□□□ 0.82
SCAF1-203ENST00000598359 LRRC59Q96AG4 307 aaKnown RBP20.15■□□□□ 0.82
SCAF1-203ENST00000598359 LAMC1P11047 1609 aa20.14■□□□□ 0.81
SCAF1-203ENST00000598359 DHX57Q6P158 1386 aaKnown RBP20.14■□□□□ 0.81
SCAF1-203ENST00000598359 RXRBP28702 533 aa20.14■□□□□ 0.81
SCAF1-203ENST00000598359 SAFB2Q14151 953 aaKnown RBP eCLIP20.14■□□□□ 0.81
SCAF1-203ENST00000598359 ESCO1Q5FWF5 840 aa20.14■□□□□ 0.81
SCAF1-203ENST00000598359 PNPLA6Q8IY17 1366 aa20.13■□□□□ 0.81
SCAF1-203ENST00000598359 PRAM1Q96QH2 718 aa20.11■□□□□ 0.81
SCAF1-203ENST00000598359 XPCQ01831 940 aaPredicted RBP20.1■□□□□ 0.81
SCAF1-203ENST00000598359 CDK12Q9NYV4 1490 aaPredicted RBP20.1■□□□□ 0.81
SCAF1-203ENST00000598359 ADGRB1O14514 1584 aa20.09■□□□□ 0.81
SCAF1-203ENST00000598359 SOS2Q07890 1332 aaPredicted RBP20.09■□□□□ 0.81
SCAF1-203ENST00000598359 FMN2Q9NZ56 1722 aa20.08■□□□□ 0.81
SCAF1-203ENST00000598359 FOXO3O43524 673 aa20.08■□□□□ 0.81
SCAF1-203ENST00000598359 SIRT1Q96EB6 747 aa20.08■□□□□ 0.81
SCAF1-203ENST00000598359 TRAK1Q9UPV9 953 aa20.08■□□□□ 0.81
SCAF1-203ENST00000598359 POGKQ9P215 609 aa20.06■□□□□ 0.8
SCAF1-203ENST00000598359 C8orf37Q96NL8 207 aa20.05■□□□□ 0.8
SCAF1-203ENST00000598359 PXDNQ92626 1479 aa20.05■□□□□ 0.8
SCAF1-203ENST00000598359 AFF2P51816 1311 aa20.04■□□□□ 0.8
SCAF1-203ENST00000598359 NPHP3Q7Z494 1330 aa20.04■□□□□ 0.8
SCAF1-203ENST00000598359 DLC1Q96QB1 1528 aa20.04■□□□□ 0.8
SCAF1-203ENST00000598359 ADAMTS2O95450 1211 aa20.04■□□□□ 0.8
SCAF1-203ENST00000598359 HIRIP3Q9BW71 556 aaPredicted RBP20.03■□□□□ 0.8
SCAF1-203ENST00000598359 MINK1Q8N4C8 1332 aaPredicted RBP20.02■□□□□ 0.79
SCAF1-203ENST00000598359 RGPD8O14715 1765 aaPredicted RBP20■□□□□ 0.79
SCAF1-203ENST00000598359 STAC3Q96MF2 364 aa19.99■□□□□ 0.79
SCAF1-203ENST00000598359 PHF8Q9UPP1 1060 aa19.98■□□□□ 0.79
SCAF1-203ENST00000598359 COL22A1Q8NFW1 1626 aaPredicted RBP19.98■□□□□ 0.79
SCAF1-203ENST00000598359 KIF1AQ12756 1690 aa19.97■□□□□ 0.79
SCAF1-203ENST00000598359 RGS12O14924 1447 aa19.97■□□□□ 0.79
SCAF1-203ENST00000598359 NGLY1Q96IV0 654 aa19.97■□□□□ 0.79
SCAF1-203ENST00000598359 USP32Q8NFA0 1604 aa19.97■□□□□ 0.79
SCAF1-203ENST00000598359 ADGRB2O60241 1585 aa19.96■□□□□ 0.79
SCAF1-203ENST00000598359 KRT28Q7Z3Y7 464 aa19.96■□□□□ 0.79
SCAF1-203ENST00000598359 SIN3AQ96ST3 1273 aa19.96■□□□□ 0.79
SCAF1-203ENST00000598359 PMFBP1Q8TBY8 1022 aa19.95■□□□□ 0.78
SCAF1-203ENST00000598359 ARHGEF28Q8N1W1 1705 aaKnown RBP19.94■□□□□ 0.78
SCAF1-203ENST00000598359 PLEKHG5O94827 1062 aa19.94■□□□□ 0.78
SCAF1-203ENST00000598359 RBM6P78332 1123 aaKnown RBP19.94■□□□□ 0.78
SCAF1-203ENST00000598359 NBPF1Q3BBV0 1214 aa19.94■□□□□ 0.78
SCAF1-203ENST00000598359 QTRT2Q9H974 415 aaKnown RBP19.93■□□□□ 0.78
SCAF1-203ENST00000598359 SPATA31A3Q5VYP0 1347 aa19.93■□□□□ 0.78
SCAF1-203ENST00000598359 PRR36Q9H6K5 1346 aa19.93■□□□□ 0.78
SCAF1-203ENST00000598359 NEUROD1Q13562 356 aa19.92■□□□□ 0.78
SCAF1-203ENST00000598359 ANKARQ7Z5J8 1434 aa19.92■□□□□ 0.78
SCAF1-203ENST00000598359 WASLO00401 505 aaPredicted RBP19.91■□□□□ 0.78
SCAF1-203ENST00000598359 L3MBTL2Q969R5 705 aa19.91■□□□□ 0.78
SCAF1-203ENST00000598359 PSME1Q06323 249 aa19.9■□□□□ 0.78
SCAF1-203ENST00000598359 LMOD2Q6P5Q4 547 aa19.89■□□□□ 0.77
SCAF1-203ENST00000598359 TULP4Q9NRJ4 1543 aa19.89■□□□□ 0.77
SCAF1-203ENST00000598359 USP21Q9UK80 565 aa19.89■□□□□ 0.77
SCAF1-203ENST00000598359 KIAA1210Q9ULL0 1709 aa19.89■□□□□ 0.77
SCAF1-203ENST00000598359 TNS3Q68CZ2 1445 aa19.88■□□□□ 0.77
SCAF1-203ENST00000598359 CABLES1Q8TDN4 633 aa19.88■□□□□ 0.77
SCAF1-203ENST00000598359 EP400Q96L91 3159 aa19.88■□□□□ 0.77
SCAF1-203ENST00000598359 ZRANB1Q9UGI0 708 aa19.87■□□□□ 0.77
SCAF1-203ENST00000598359 ATAD2Q6PL18 1390 aa19.86■□□□□ 0.77
SCAF1-203ENST00000598359 FNBP4Q8N3X1 1017 aaPredicted RBP19.86■□□□□ 0.77
SCAF1-203ENST00000598359 MARF1Q9Y4F3 1742 aaKnown RBP19.85■□□□□ 0.77
SCAF1-203ENST00000598359 SBNO1A3KN83 1393 aa19.84■□□□□ 0.77
SCAF1-203ENST00000598359 EIF3AQ14152 1382 aaKnown RBP19.84■□□□□ 0.77
SCAF1-203ENST00000598359 CDK19Q9BWU1 502 aa19.84■□□□□ 0.77
SCAF1-203ENST00000598359 NUDT16Q96DE0 195 aaKnown RBP19.83■□□□□ 0.77
SCAF1-203ENST00000598359 ATP7BP35670 1465 aa19.83■□□□□ 0.76
SCAF1-203ENST00000598359 BCL9LQ86UU0 1499 aa19.83■□□□□ 0.76
SCAF1-203ENST00000598359 HAP1P54257 671 aaPredicted RBP19.82■□□□□ 0.76
SCAF1-203ENST00000598359 NGDNQ8NEJ9 315 aaKnown RBP19.82■□□□□ 0.76
SCAF1-203ENST00000598359 TRPC5Q9UL62 973 aaPredicted RBP19.82■□□□□ 0.76
SCAF1-203ENST00000598359 ATRNO75882 1429 aa19.82■□□□□ 0.76
SCAF1-203ENST00000598359 TRPM3Q9HCF6 1732 aaPredicted RBP19.82■□□□□ 0.76
SCAF1-203ENST00000598359 GPRASP1Q5JY77 1395 aa19.81■□□□□ 0.76
SCAF1-203ENST00000598359 ARHGEF10O15013 1369 aa19.8■□□□□ 0.76
SCAF1-203ENST00000598359 ABCA3Q99758 1704 aa19.79■□□□□ 0.76
SCAF1-203ENST00000598359 CENPJQ9HC77 1338 aaPredicted RBP19.78■□□□□ 0.76
SCAF1-203ENST00000598359 TRPM1Q7Z4N2 1603 aa19.78■□□□□ 0.76
SCAF1-203ENST00000598359 PAK3O75914 559 aaPredicted RBP19.78■□□□□ 0.76
SCAF1-203ENST00000598359 TRIM26Q12899 539 aaPredicted RBP19.78■□□□□ 0.76
SCAF1-203ENST00000598359 ALS2Q96Q42 1657 aa19.77■□□□□ 0.76
SCAF1-203ENST00000598359 SLIT2O94813 1529 aa19.76■□□□□ 0.75
SCAF1-203ENST00000598359 ITSN1Q15811 1721 aa19.76■□□□□ 0.75
SCAF1-203ENST00000598359 TOPAZ1Q8N9V7 1692 aa19.75■□□□□ 0.75
SCAF1-203ENST00000598359 QRICH2Q9H0J4 1663 aa19.75■□□□□ 0.75
SCAF1-203ENST00000598359 NBPF8Q3BBV2 869 aa19.75■□□□□ 0.75
SCAF1-203ENST00000598359 UNC5CLQ8IV45 518 aa19.75■□□□□ 0.75
SCAF1-203ENST00000598359 CABP2Q9NPB3 220 aa19.75■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms