RNA–Protein interactions for RNA: ENST00000598166.2

LTBP4-220, Transcript of latent transforming growth factor beta binding protein 4, humanhuman

TSL 5

Gene LTBP4, Length 699 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4-220ENST00000598166 ADAMTS2O95450 1211 aa22.34■■□□□ 1.17
LTBP4-220ENST00000598166 VGFO15240 615 aaPredicted RBP22.33■■□□□ 1.17
LTBP4-220ENST00000598166 ADGRF5Q8IZF2 1346 aa22.32■■□□□ 1.16
LTBP4-220ENST00000598166 IFT172Q9UG01 1749 aa22.32■■□□□ 1.16
LTBP4-220ENST00000598166 C1orf167Q5SNV9 1468 aa22.3■■□□□ 1.16
LTBP4-220ENST00000598166 ORAI2Q96SN7 254 aa22.29■■□□□ 1.16
LTBP4-220ENST00000598166 SOS2Q07890 1332 aaPredicted RBP22.29■■□□□ 1.16
LTBP4-220ENST00000598166 SIN3AQ96ST3 1273 aa22.28■■□□□ 1.16
LTBP4-220ENST00000598166 USP21Q9UK80 565 aa22.27■■□□□ 1.16
LTBP4-220ENST00000598166 NALCNQ8IZF0 1738 aa22.26■■□□□ 1.15
LTBP4-220ENST00000598166 FNBP4Q8N3X1 1017 aaPredicted RBP22.26■■□□□ 1.15
LTBP4-220ENST00000598166 MYOM2P54296 1465 aa22.26■■□□□ 1.15
LTBP4-220ENST00000598166 ATAD2Q6PL18 1390 aa22.25■■□□□ 1.15
LTBP4-220ENST00000598166 PIK3C2GO75747 1445 aa22.24■■□□□ 1.15
LTBP4-220ENST00000598166 NEUROD1Q13562 356 aa22.24■■□□□ 1.15
LTBP4-220ENST00000598166 TRPC5Q9UL62 973 aaPredicted RBP22.24■■□□□ 1.15
LTBP4-220ENST00000598166 DCAF11Q8TEB1 546 aa22.23■■□□□ 1.15
LTBP4-220ENST00000598166 KDM2AQ9Y2K7 1162 aa22.23■■□□□ 1.15
LTBP4-220ENST00000598166 LAMC1P11047 1609 aa22.23■■□□□ 1.15
LTBP4-220ENST00000598166 NRXN1Q9ULB1 1477 aa22.22■■□□□ 1.15
LTBP4-220ENST00000598166 ROBO2Q9HCK4 1378 aa22.22■■□□□ 1.15
LTBP4-220ENST00000598166 ATRNO75882 1429 aa22.19■■□□□ 1.14
LTBP4-220ENST00000598166 PTCH1Q13635 1447 aa22.19■■□□□ 1.14
LTBP4-220ENST00000598166 ZRANB1Q9UGI0 708 aa22.18■■□□□ 1.14
LTBP4-220ENST00000598166 BCL9LQ86UU0 1499 aa22.15■■□□□ 1.14
LTBP4-220ENST00000598166 CFAP70Q5T0N1 1121 aa22.15■■□□□ 1.14
LTBP4-220ENST00000598166 EP400Q96L91 3159 aa22.15■■□□□ 1.14
LTBP4-220ENST00000598166 TMEM132EQ6IEE7 984 aa22.14■■□□□ 1.13
LTBP4-220ENST00000598166 L3MBTL2Q969R5 705 aa22.14■■□□□ 1.13
LTBP4-220ENST00000598166 C14orf93Q9H972 538 aaKnown RBP22.13■■□□□ 1.13
LTBP4-220ENST00000598166 PRAG1Q86YV5 1406 aa22.13■■□□□ 1.13
LTBP4-220ENST00000598166 CCDC125Q86Z20 511 aa22.12■■□□□ 1.13
LTBP4-220ENST00000598166 COL22A1Q8NFW1 1626 aaPredicted RBP22.12■■□□□ 1.13
LTBP4-220ENST00000598166 ESCO1Q5FWF5 840 aa22.1■■□□□ 1.13
LTBP4-220ENST00000598166 GJD4Q96KN9 370 aaPredicted RBP22.1■■□□□ 1.13
LTBP4-220ENST00000598166 STK26Q9P289 416 aa22.1■■□□□ 1.13
LTBP4-220ENST00000598166 STAC3Q96MF2 364 aa22.09■■□□□ 1.13
LTBP4-220ENST00000598166 LRPPRCP42704 1394 aaKnown RBP22.09■■□□□ 1.13
LTBP4-220ENST00000598166 NPHP3Q7Z494 1330 aa22.08■■□□□ 1.13
LTBP4-220ENST00000598166 FOXO3O43524 673 aa22.08■■□□□ 1.13
LTBP4-220ENST00000598166 XPCQ01831 940 aaPredicted RBP22.08■■□□□ 1.13
LTBP4-220ENST00000598166 PXDNQ92626 1479 aa22.08■■□□□ 1.12
LTBP4-220ENST00000598166 YTHDC2Q9H6S0 1430 aaKnown RBP22.07■■□□□ 1.12
LTBP4-220ENST00000598166 TONSLQ96HA7 1378 aa22.06■■□□□ 1.12
LTBP4-220ENST00000598166 ADGRB1O14514 1584 aa22.06■■□□□ 1.12
LTBP4-220ENST00000598166 CCER1Q8TC90 406 aaPredicted RBP22.04■■□□□ 1.12
LTBP4-220ENST00000598166 TECPR2O15040 1411 aa22.03■■□□□ 1.12
LTBP4-220ENST00000598166 ABCC11Q96J66 1382 aa22.02■■□□□ 1.12
LTBP4-220ENST00000598166 PLEKHH1Q9ULM0 1364 aa22.01■■□□□ 1.11
LTBP4-220ENST00000598166 KNDC1Q76NI1 1749 aa22.01■■□□□ 1.11
LTBP4-220ENST00000598166 NUTM2FA1L443 756 aa22.01■■□□□ 1.11
LTBP4-220ENST00000598166 UNC5CLQ8IV45 518 aa22.01■■□□□ 1.11
LTBP4-220ENST00000598166 WAPLQ7Z5K2 1190 aa22■■□□□ 1.11
LTBP4-220ENST00000598166 CDC42BPGQ6DT37 1551 aa21.99■■□□□ 1.11
LTBP4-220ENST00000598166 CLSPNQ9HAW4 1339 aa21.99■■□□□ 1.11
LTBP4-220ENST00000598166 BLMP54132 1417 aaPredicted RBP21.98■■□□□ 1.11
LTBP4-220ENST00000598166 RALGAPBQ86X10 1494 aa21.98■■□□□ 1.11
LTBP4-220ENST00000598166 SLIT2O94813 1529 aa21.98■■□□□ 1.11
LTBP4-220ENST00000598166 NBPF1Q3BBV0 1214 aa21.98■■□□□ 1.11
LTBP4-220ENST00000598166 DEFB132Q7Z7B7 95 aa21.98■■□□□ 1.11
LTBP4-220ENST00000598166 GLI3P10071 1580 aa21.97■■□□□ 1.11
LTBP4-220ENST00000598166 NBPF8Q3BBV2 869 aa21.97■■□□□ 1.11
LTBP4-220ENST00000598166 TRAK1Q9UPV9 953 aa21.97■■□□□ 1.11
LTBP4-220ENST00000598166 SPATA31A3Q5VYP0 1347 aa21.97■■□□□ 1.11
LTBP4-220ENST00000598166 KIAA1210Q9ULL0 1709 aa21.97■■□□□ 1.11
LTBP4-220ENST00000598166 MARF1Q9Y4F3 1742 aaKnown RBP21.97■■□□□ 1.11
LTBP4-220ENST00000598166 DLC1Q96QB1 1528 aa21.95■■□□□ 1.1
LTBP4-220ENST00000598166 SAFB2Q14151 953 aaKnown RBP eCLIP21.94■■□□□ 1.1
LTBP4-220ENST00000598166 PRAM1Q96QH2 718 aa21.94■■□□□ 1.1
LTBP4-220ENST00000598166 TRPM1Q7Z4N2 1603 aa21.94■■□□□ 1.1
LTBP4-220ENST00000598166 SEPT12Q8IYM1 358 aa21.93■■□□□ 1.1
LTBP4-220ENST00000598166 TNKS1BP1Q9C0C2 1729 aaKnown RBP21.92■■□□□ 1.1
LTBP4-220ENST00000598166 ONECUT3O60422 494 aaPredicted RBP21.91■■□□□ 1.1
LTBP4-220ENST00000598166 KRT28Q7Z3Y7 464 aa21.91■■□□□ 1.1
LTBP4-220ENST00000598166 SIRT1Q96EB6 747 aa21.91■■□□□ 1.1
LTBP4-220ENST00000598166 ROCK2O75116 1388 aaKnown RBP21.9■■□□□ 1.1
LTBP4-220ENST00000598166 POGKQ9P215 609 aa21.9■■□□□ 1.1
LTBP4-220ENST00000598166 VPS72Q15906 364 aa21.89■■□□□ 1.09
LTBP4-220ENST00000598166 CABLES1Q8TDN4 633 aa21.89■■□□□ 1.09
LTBP4-220ENST00000598166 ARHGEF28Q8N1W1 1705 aaKnown RBP21.88■■□□□ 1.09
LTBP4-220ENST00000598166 BRWD3Q6RI45 1802 aa21.86■■□□□ 1.09
LTBP4-220ENST00000598166 SF3B2Q13435 895 aaKnown RBP21.86■■□□□ 1.09
LTBP4-220ENST00000598166 USP32Q8NFA0 1604 aa21.85■■□□□ 1.09
LTBP4-220ENST00000598166 MINK1Q8N4C8 1332 aaPredicted RBP21.84■■□□□ 1.09
LTBP4-220ENST00000598166 KRT27Q7Z3Y8 459 aa21.84■■□□□ 1.09
LTBP4-220ENST00000598166 HIRIP3Q9BW71 556 aaPredicted RBP21.84■■□□□ 1.09
LTBP4-220ENST00000598166 PLEKHG5O94827 1062 aa21.83■■□□□ 1.09
LTBP4-220ENST00000598166 GPRASP1Q5JY77 1395 aa21.83■■□□□ 1.08
LTBP4-220ENST00000598166 PHF8Q9UPP1 1060 aa21.82■■□□□ 1.08
LTBP4-220ENST00000598166 FMN2Q9NZ56 1722 aa21.82■■□□□ 1.08
LTBP4-220ENST00000598166 TNS3Q68CZ2 1445 aa21.81■■□□□ 1.08
LTBP4-220ENST00000598166 FAM83GA6ND36 823 aa21.81■■□□□ 1.08
LTBP4-220ENST00000598166 HAP1P54257 671 aaPredicted RBP21.81■■□□□ 1.08
LTBP4-220ENST00000598166 CCDC9Q9Y3X0 531 aaKnown RBP21.81■■□□□ 1.08
LTBP4-220ENST00000598166 ADGRB2O60241 1585 aa21.8■■□□□ 1.08
LTBP4-220ENST00000598166 PSDA5PKW4 1024 aaPredicted RBP21.8■■□□□ 1.08
LTBP4-220ENST00000598166 PSME1Q06323 249 aa21.8■■□□□ 1.08
LTBP4-220ENST00000598166 TIMELESSQ9UNS1 1208 aa21.8■■□□□ 1.08
LTBP4-220ENST00000598166 KIF1AQ12756 1690 aa21.79■■□□□ 1.08
LTBP4-220ENST00000598166 CARD11Q9BXL7 1154 aa21.79■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms