RNA–Protein interactions for RNA: ENST00000596467.5

FARP1-217, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 5

Gene FARP1, Length 799 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-217ENST00000596467 COL22A1Q8NFW1 1626 aaPredicted RBP13.08□□□□□ -0.32
FARP1-217ENST00000596467 ADGRL2O95490 1459 aa13.08□□□□□ -0.32
FARP1-217ENST00000596467 IQGAP3Q86VI3 1631 aa13.07□□□□□ -0.32
FARP1-217ENST00000596467 TRPC5Q9UL62 973 aaPredicted RBP13.07□□□□□ -0.32
FARP1-217ENST00000596467 PTCH1Q13635 1447 aa13.06□□□□□ -0.32
FARP1-217ENST00000596467 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.06□□□□□ -0.32
FARP1-217ENST00000596467 FNBP4Q8N3X1 1017 aaPredicted RBP13.06□□□□□ -0.32
FARP1-217ENST00000596467 ATRNO75882 1429 aa13.05□□□□□ -0.32
FARP1-217ENST00000596467 SPHKAPQ2M3C7 1700 aa13.05□□□□□ -0.32
FARP1-217ENST00000596467 ADGRL3Q9HAR2 1447 aa13.05□□□□□ -0.32
FARP1-217ENST00000596467 USP21Q9UK80 565 aa13.04□□□□□ -0.32
FARP1-217ENST00000596467 BRWD3Q6RI45 1802 aa13.04□□□□□ -0.32
FARP1-217ENST00000596467 SAMD1Q6SPF0 538 aaPredicted RBP13.03□□□□□ -0.32
FARP1-217ENST00000596467 ADAMTS2O95450 1211 aa13.02□□□□□ -0.33
FARP1-217ENST00000596467 ANKRD50Q9ULJ7 1429 aa13.02□□□□□ -0.33
FARP1-217ENST00000596467 DSG3P32926 999 aa13.01□□□□□ -0.33
FARP1-217ENST00000596467 DDX17Q92841 729 aaKnown RBP13.01□□□□□ -0.33
FARP1-217ENST00000596467 CHIC2Q9UKJ5 165 aa13.01□□□□□ -0.33
FARP1-217ENST00000596467 SOS2Q07890 1332 aaPredicted RBP13.01□□□□□ -0.33
FARP1-217ENST00000596467 C1orf167Q5SNV9 1468 aa13□□□□□ -0.33
FARP1-217ENST00000596467 CHGAP10645 457 aaKnown RBP13□□□□□ -0.33
FARP1-217ENST00000596467 BLMP54132 1417 aaPredicted RBP12.99□□□□□ -0.33
FARP1-217ENST00000596467 BCL9LQ86UU0 1499 aa12.98□□□□□ -0.33
FARP1-217ENST00000596467 MYOM2P54296 1465 aa12.97□□□□□ -0.33
FARP1-217ENST00000596467 METP08581 1390 aa12.96□□□□□ -0.33
FARP1-217ENST00000596467 ABCB7O75027 752 aa12.95□□□□□ -0.34
FARP1-217ENST00000596467 APLP2Q06481 763 aa12.95□□□□□ -0.34
FARP1-217ENST00000596467 GJD4Q96KN9 370 aaPredicted RBP12.95□□□□□ -0.34
FARP1-217ENST00000596467 GLI3P10071 1580 aa12.94□□□□□ -0.34
FARP1-217ENST00000596467 KIF1BO60333 1816 aa12.93□□□□□ -0.34
FARP1-217ENST00000596467 PRAG1Q86YV5 1406 aa12.93□□□□□ -0.34
FARP1-217ENST00000596467 ORAI2Q96SN7 254 aa12.91□□□□□ -0.34
FARP1-217ENST00000596467 NEXMIFQ5QGS0 1516 aa12.91□□□□□ -0.34
FARP1-217ENST00000596467 PXDNQ92626 1479 aa12.91□□□□□ -0.34
FARP1-217ENST00000596467 NWD2Q9ULI1 1742 aa12.91□□□□□ -0.34
FARP1-217ENST00000596467 SLIT2O94813 1529 aa12.9□□□□□ -0.34
FARP1-217ENST00000596467 SLC24A1O60721 1099 aa12.9□□□□□ -0.34
FARP1-217ENST00000596467 ZNF219Q9P2Y4 722 aaPredicted RBP12.9□□□□□ -0.34
FARP1-217ENST00000596467 RALGAPBQ86X10 1494 aa12.9□□□□□ -0.34
FARP1-217ENST00000596467 SF3B2Q13435 895 aaKnown RBP12.89□□□□□ -0.35
FARP1-217ENST00000596467 DEFB132Q7Z7B7 95 aa12.89□□□□□ -0.35
FARP1-217ENST00000596467 NPHP3Q7Z494 1330 aa12.88□□□□□ -0.35
FARP1-217ENST00000596467 CDC42BPGQ6DT37 1551 aa12.88□□□□□ -0.35
FARP1-217ENST00000596467 UNC5CLQ8IV45 518 aa12.87□□□□□ -0.35
FARP1-217ENST00000596467 RGPD1P0DJD0 1748 aa12.87□□□□□ -0.35
FARP1-217ENST00000596467 USP32Q8NFA0 1604 aa12.87□□□□□ -0.35
FARP1-217ENST00000596467 PLCH1Q4KWH8 1693 aa12.86□□□□□ -0.35
FARP1-217ENST00000596467 HRCP23327 699 aa12.86□□□□□ -0.35
FARP1-217ENST00000596467 HFM1A2PYH4 1435 aa12.86□□□□□ -0.35
FARP1-217ENST00000596467 ROCK1Q13464 1354 aa12.85□□□□□ -0.35
FARP1-217ENST00000596467 ROBO2Q9HCK4 1378 aa12.85□□□□□ -0.35
FARP1-217ENST00000596467 ONECUT3O60422 494 aaPredicted RBP12.85□□□□□ -0.35
FARP1-217ENST00000596467 ZNF326Q5BKZ1 582 aaKnown RBP12.85□□□□□ -0.35
FARP1-217ENST00000596467 CLTCL1P53675 1640 aa12.84□□□□□ -0.35
FARP1-217ENST00000596467 KIF1AQ12756 1690 aa12.83□□□□□ -0.35
FARP1-217ENST00000596467 NUP155O75694 1391 aa12.83□□□□□ -0.36
FARP1-217ENST00000596467 LRPPRCP42704 1394 aaKnown RBP12.83□□□□□ -0.36
FARP1-217ENST00000596467 ABCA3Q99758 1704 aa12.82□□□□□ -0.36
FARP1-217ENST00000596467 PPLO60437 1756 aa12.82□□□□□ -0.36
FARP1-217ENST00000596467 FAM50AQ14320 339 aaKnown RBP12.82□□□□□ -0.36
FARP1-217ENST00000596467 SEPT12Q8IYM1 358 aa12.82□□□□□ -0.36
FARP1-217ENST00000596467 BAG6P46379 1132 aa12.81□□□□□ -0.36
FARP1-217ENST00000596467 ESCO1Q5FWF5 840 aa12.81□□□□□ -0.36
FARP1-217ENST00000596467 TNS1Q9HBL0 1735 aaKnown RBP12.81□□□□□ -0.36
FARP1-217ENST00000596467 RGPD8O14715 1765 aaPredicted RBP12.8□□□□□ -0.36
FARP1-217ENST00000596467 PSDA5PKW4 1024 aaPredicted RBP12.8□□□□□ -0.36
FARP1-217ENST00000596467 VPS72Q15906 364 aa12.8□□□□□ -0.36
FARP1-217ENST00000596467 KRT27Q7Z3Y8 459 aa12.8□□□□□ -0.36
FARP1-217ENST00000596467 FMN2Q9NZ56 1722 aa12.79□□□□□ -0.36
FARP1-217ENST00000596467 FOXO3O43524 673 aa12.79□□□□□ -0.36
FARP1-217ENST00000596467 VGFO15240 615 aaPredicted RBP12.78□□□□□ -0.36
FARP1-217ENST00000596467 NRAPQ86VF7 1730 aa12.78□□□□□ -0.36
FARP1-217ENST00000596467 SPATA31A3Q5VYP0 1347 aa12.78□□□□□ -0.36
FARP1-217ENST00000596467 DISP2A7MBM2 1401 aa12.78□□□□□ -0.36
FARP1-217ENST00000596467 KNDC1Q76NI1 1749 aa12.77□□□□□ -0.36
FARP1-217ENST00000596467 CCDC144AA2RUR9 1427 aa12.77□□□□□ -0.37
FARP1-217ENST00000596467 XPCQ01831 940 aaPredicted RBP12.75□□□□□ -0.37
FARP1-217ENST00000596467 IFT172Q9UG01 1749 aa12.75□□□□□ -0.37
FARP1-217ENST00000596467 TECPR2O15040 1411 aa12.74□□□□□ -0.37
FARP1-217ENST00000596467 NAIPQ13075 1403 aa12.74□□□□□ -0.37
FARP1-217ENST00000596467 LOC105371045A0A1W2PR82 267 aa12.74□□□□□ -0.37
FARP1-217ENST00000596467 YY1P25490 414 aa12.74□□□□□ -0.37
FARP1-217ENST00000596467 RPGRIP1LQ68CZ1 1315 aa12.73□□□□□ -0.37
FARP1-217ENST00000596467 RREB1Q92766 1687 aa12.73□□□□□ -0.37
FARP1-217ENST00000596467 ADGRB2O60241 1585 aa12.73□□□□□ -0.37
FARP1-217ENST00000596467 TNS3Q68CZ2 1445 aa12.72□□□□□ -0.37
FARP1-217ENST00000596467 EN1Q05925 392 aaPredicted RBP12.72□□□□□ -0.37
FARP1-217ENST00000596467 R3HDM1Q15032 1099 aaKnown RBP12.72□□□□□ -0.37
FARP1-217ENST00000596467 THSD7AQ9UPZ6 1657 aa12.72□□□□□ -0.37
FARP1-217ENST00000596467 COL14A1Q05707 1796 aaKnown RBP12.71□□□□□ -0.37
FARP1-217ENST00000596467 KRT28Q7Z3Y7 464 aa12.7□□□□□ -0.38
FARP1-217ENST00000596467 CCDC9Q9Y3X0 531 aaKnown RBP12.7□□□□□ -0.38
FARP1-217ENST00000596467 NUP188Q5SRE5 1749 aa12.7□□□□□ -0.38
FARP1-217ENST00000596467 CHD4Q14839 1912 aa12.69□□□□□ -0.38
FARP1-217ENST00000596467 HAP1P54257 671 aaPredicted RBP12.69□□□□□ -0.38
FARP1-217ENST00000596467 SBNO1A3KN83 1393 aa12.69□□□□□ -0.38
FARP1-217ENST00000596467 PARD3Q8TEW0 1356 aa12.69□□□□□ -0.38
FARP1-217ENST00000596467 UTRNP46939 3433 aa12.68□□□□□ -0.38
FARP1-217ENST00000596467 PSME1Q06323 249 aa12.68□□□□□ -0.38
FARP1-217ENST00000596467 ARHGEF10O15013 1369 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms