RNA–Protein interactions for RNA: ENST00000596378.1

SRRM1-222, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 1 (best)

Gene SRRM1, Length 2,314 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-222ENST00000596378 DIP2BQ9P265 1576 aa29.9■■■□□ 2.38
SRRM1-222ENST00000596378 TMEM131LA2VDJ0 1609 aa29.89■■■□□ 2.38
SRRM1-222ENST00000596378 SPINK5Q9NQ38 1064 aaPredicted RBP29.88■■■□□ 2.37
SRRM1-222ENST00000596378 EVC2Q86UK5 1308 aa29.88■■■□□ 2.37
SRRM1-222ENST00000596378 CABP2Q9NPB3 220 aa29.88■■■□□ 2.37
SRRM1-222ENST00000596378 SLFN5Q08AF3 891 aa29.87■■■□□ 2.37
SRRM1-222ENST00000596378 POLR3AO14802 1390 aaPredicted RBP29.86■■■□□ 2.37
SRRM1-222ENST00000596378 SHPRHQ149N8 1683 aa29.84■■■□□ 2.37
SRRM1-222ENST00000596378 ZFYVE9O95405 1425 aa29.84■■■□□ 2.37
SRRM1-222ENST00000596378 DMRT2Q9Y5R5 561 aa29.83■■■□□ 2.37
SRRM1-222ENST00000596378 USP32Q8NFA0 1604 aa29.81■■■□□ 2.36
SRRM1-222ENST00000596378 CGNL1Q0VF96 1302 aa29.8■■■□□ 2.36
SRRM1-222ENST00000596378 TRMT2AQ8IZ69 625 aaKnown RBP29.79■■■□□ 2.36
SRRM1-222ENST00000596378 ANKRD36BQ8N2N9 1353 aa29.78■■■□□ 2.36
SRRM1-222ENST00000596378 MTHFSP49914 203 aa29.76■■■□□ 2.35
SRRM1-222ENST00000596378 PTPRMP28827 1452 aa29.75■■■□□ 2.35
SRRM1-222ENST00000596378 PUS7Q96PZ0 661 aaKnown RBP29.75■■■□□ 2.35
SRRM1-222ENST00000596378 SRPK2P78362 688 aaKnown RBP29.74■■■□□ 2.35
SRRM1-222ENST00000596378 MINK1Q8N4C8 1332 aaPredicted RBP29.74■■■□□ 2.35
SRRM1-222ENST00000596378 NKTRP30414 1462 aaKnown RBP29.74■■■□□ 2.35
SRRM1-222ENST00000596378 PRAM1Q96QH2 718 aa29.73■■■□□ 2.35
SRRM1-222ENST00000596378 CLTCQ00610 1675 aaKnown RBP29.73■■■□□ 2.35
SRRM1-222ENST00000596378 SKAP1Q86WV1 359 aa29.73■■■□□ 2.35
SRRM1-222ENST00000596378 STAG3Q9UJ98 1225 aa29.73■■■□□ 2.35
SRRM1-222ENST00000596378 NEUROD2Q15784 382 aa29.72■■■□□ 2.35
SRRM1-222ENST00000596378 YTHDC2Q9H6S0 1430 aaKnown RBP29.71■■■□□ 2.35
SRRM1-222ENST00000596378 E9PSI1 815 aa29.71■■■□□ 2.35
SRRM1-222ENST00000596378 MLECQ14165 292 aa29.71■■■□□ 2.35
SRRM1-222ENST00000596378 RRP7AQ9Y3A4 280 aaKnown RBP29.71■■■□□ 2.35
SRRM1-222ENST00000596378 A0A1W2PP64 1363 aa29.71■■■□□ 2.35
SRRM1-222ENST00000596378 WWC1Q8IX03 1113 aa29.7■■■□□ 2.34
SRRM1-222ENST00000596378 ERICH6Q7L0X2 663 aa29.69■■■□□ 2.34
SRRM1-222ENST00000596378 ALKQ9UM73 1620 aa29.68■■■□□ 2.34
SRRM1-222ENST00000596378 BCAR3O75815 825 aa29.68■■■□□ 2.34
SRRM1-222ENST00000596378 POGKQ9P215 609 aa29.68■■■□□ 2.34
SRRM1-222ENST00000596378 TCERG1O14776 1098 aaKnown RBP29.67■■■□□ 2.34
SRRM1-222ENST00000596378 REREQ9P2R6 1566 aa29.66■■■□□ 2.34
SRRM1-222ENST00000596378 GOLGA6L2Q8N9W4 650 aaPredicted RBP29.66■■■□□ 2.34
SRRM1-222ENST00000596378 RUNDC1Q96C34 613 aa29.66■■■□□ 2.34
SRRM1-222ENST00000596378 AGLP35573 1532 aa29.66■■■□□ 2.34
SRRM1-222ENST00000596378 NSD2O96028 1365 aa29.65■■■□□ 2.34
SRRM1-222ENST00000596378 TCP11L2Q8N4U5 519 aa29.64■■■□□ 2.34
SRRM1-222ENST00000596378 CFAP53Q96M91 514 aa29.64■■■□□ 2.34
SRRM1-222ENST00000596378 IQSEC2Q5JU85 1478 aa29.64■■■□□ 2.33
SRRM1-222ENST00000596378 NGEFQ8N5V2 710 aa29.63■■■□□ 2.33
SRRM1-222ENST00000596378 GGNBP2Q9H3C7 697 aa29.63■■■□□ 2.33
SRRM1-222ENST00000596378 ABCC11Q96J66 1382 aa29.63■■■□□ 2.33
SRRM1-222ENST00000596378 A2ML1A8K2U0 1454 aa29.6■■■□□ 2.33
SRRM1-222ENST00000596378 ATAD2Q6PL18 1390 aa29.59■■■□□ 2.33
SRRM1-222ENST00000596378 NINLQ9Y2I6 1382 aa29.59■■■□□ 2.33
SRRM1-222ENST00000596378 CD163L1Q9NR16 1453 aa29.59■■■□□ 2.33
SRRM1-222ENST00000596378 KDM2BQ8NHM5 1336 aa29.59■■■□□ 2.33
SRRM1-222ENST00000596378 PDE4AP27815 886 aa29.58■■■□□ 2.33
SRRM1-222ENST00000596378 SPATA31D1Q6ZQQ2 1576 aa29.58■■■□□ 2.33
SRRM1-222ENST00000596378 U2AF1L5P0DN76 240 aaPredicted RBP29.57■■■□□ 2.32
SRRM1-222ENST00000596378 ANP32AP39687 249 aaKnown RBP29.57■■■□□ 2.32
SRRM1-222ENST00000596378 U2AF1Q01081 240 aaKnown RBP eCLIP29.57■■■□□ 2.321e-12■■□□□ 14.4
SRRM1-222ENST00000596378 CDK19Q9BWU1 502 aa29.56■■■□□ 2.32
SRRM1-222ENST00000596378 PPP6R1Q9UPN7 881 aa29.56■■■□□ 2.32
SRRM1-222ENST00000596378 RIMS2Q9UQ26 1411 aa29.55■■■□□ 2.32
SRRM1-222ENST00000596378 PAK3O75914 559 aaPredicted RBP29.54■■■□□ 2.32
SRRM1-222ENST00000596378 TERF2IPQ9NYB0 399 aa29.54■■■□□ 2.32
SRRM1-222ENST00000596378 FYB1O15117 783 aa29.54■■■□□ 2.32
SRRM1-222ENST00000596378 MS4A1P11836 297 aa29.54■■■□□ 2.32
SRRM1-222ENST00000596378 WAPLQ7Z5K2 1190 aa29.54■■■□□ 2.32
SRRM1-222ENST00000596378 ARHGEF40Q8TER5 1519 aa29.53■■■□□ 2.32
SRRM1-222ENST00000596378 PHF23Q9BUL5 403 aaPredicted RBP29.53■■■□□ 2.32
SRRM1-222ENST00000596378 NOP58Q9Y2X3 529 aaKnown RBP29.53■■■□□ 2.32
SRRM1-222ENST00000596378 BACH2Q9BYV9 841 aa29.53■■■□□ 2.32
SRRM1-222ENST00000596378 KIF13AQ9H1H9 1805 aa29.52■■■□□ 2.32
SRRM1-222ENST00000596378 NPM2Q86SE8 214 aaKnown RBP29.51■■■□□ 2.32
SRRM1-222ENST00000596378 CABP1Q9NZU7 370 aa29.51■■■□□ 2.32
SRRM1-222ENST00000596378 NLRP1Q9C000 1473 aa29.5■■■□□ 2.31
SRRM1-222ENST00000596378 SETD1AO15047 1707 aaKnown RBP29.5■■■□□ 2.31
SRRM1-222ENST00000596378 CENPQQ7L2Z9 268 aaPredicted RBP29.5■■■□□ 2.31
SRRM1-222ENST00000596378 IPO9Q96P70 1041 aaKnown RBP29.49■■■□□ 2.31
SRRM1-222ENST00000596378 ANKRD26Q9UPS8 1709 aa29.49■■■□□ 2.31
SRRM1-222ENST00000596378 U2SURPO15042 1029 aaKnown RBP29.48■■■□□ 2.31
SRRM1-222ENST00000596378 HDGFL2Q7Z4V5 671 aaPredicted RBP29.46■■■□□ 2.31
SRRM1-222ENST00000596378 COL3A1P02461 1466 aaPredicted RBP29.46■■■□□ 2.31
SRRM1-222ENST00000596378 WDR63Q8IWG1 891 aa29.46■■■□□ 2.31
SRRM1-222ENST00000596378 CANXP27824 592 aaKnown RBP29.45■■■□□ 2.3
SRRM1-222ENST00000596378 PANK1Q8TE04 598 aa29.44■■■□□ 2.3
SRRM1-222ENST00000596378 ADGRB2O60241 1585 aa29.44■■■□□ 2.3
SRRM1-222ENST00000596378 CCDC27Q2M243 656 aa29.44■■■□□ 2.3
SRRM1-222ENST00000596378 FRAT1Q92837 279 aaPredicted RBP29.44■■■□□ 2.3
SRRM1-222ENST00000596378 NRXN3Q9Y4C0 1643 aa29.42■■■□□ 2.3
SRRM1-222ENST00000596378 DLC1Q96QB1 1528 aa29.42■■■□□ 2.3
SRRM1-222ENST00000596378 ZMYM3Q14202 1370 aa29.42■■■□□ 2.3
SRRM1-222ENST00000596378 KIF20BQ96Q89 1820 aa29.42■■■□□ 2.3
SRRM1-222ENST00000596378 RARSP54136 660 aaKnown RBP29.42■■■□□ 2.3
SRRM1-222ENST00000596378 SUGP2Q8IX01 1082 aaKnown RBP eCLIP29.42■■■□□ 2.3
SRRM1-222ENST00000596378 MED14O60244 1454 aa29.41■■■□□ 2.3
SRRM1-222ENST00000596378 BCL2L13Q9BXK5 485 aa29.41■■■□□ 2.3
SRRM1-222ENST00000596378 ESF1Q9H501 851 aaKnown RBP29.41■■■□□ 2.3
SRRM1-222ENST00000596378 COG6Q9Y2V7 657 aa29.4■■■□□ 2.3
SRRM1-222ENST00000596378 METP08581 1390 aa29.4■■■□□ 2.3
SRRM1-222ENST00000596378 PDE3AQ14432 1141 aa29.39■■■□□ 2.3
SRRM1-222ENST00000596378 PLEKHF1Q96S99 279 aa29.39■■■□□ 2.3
SRRM1-222ENST00000596378 FBLN1P23142 703 aa29.39■■■□□ 2.3
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms