RNA–Protein interactions for RNA: ENST00000595789.5

XRCC1-205, Transcript of X-ray repair cross complementing 1, humanhuman

TSL 3

Gene XRCC1, Length 1,147 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-205ENST00000595789 TECPR2O15040 1411 aa22.19■■□□□ 1.14
XRCC1-205ENST00000595789 LRPPRCP42704 1394 aaKnown RBP22.18■■□□□ 1.14
XRCC1-205ENST00000595789 ABCC11Q96J66 1382 aa22.18■■□□□ 1.14
XRCC1-205ENST00000595789 ADAMTS2O95450 1211 aa22.18■■□□□ 1.14
XRCC1-205ENST00000595789 WAPLQ7Z5K2 1190 aa22.18■■□□□ 1.14
XRCC1-205ENST00000595789 RBM6P78332 1123 aaKnown RBP22.17■■□□□ 1.14
XRCC1-205ENST00000595789 TMEM132EQ6IEE7 984 aa22.17■■□□□ 1.14
XRCC1-205ENST00000595789 STK26Q9P289 416 aa22.17■■□□□ 1.14
XRCC1-205ENST00000595789 ESCO1Q5FWF5 840 aa22.16■■□□□ 1.14
XRCC1-205ENST00000595789 NGLY1Q96IV0 654 aa22.16■■□□□ 1.14
XRCC1-205ENST00000595789 CDC42BPGQ6DT37 1551 aa22.16■■□□□ 1.14
XRCC1-205ENST00000595789 PIK3C2GO75747 1445 aa22.14■■□□□ 1.14
XRCC1-205ENST00000595789 PLEKHH1Q9ULM0 1364 aa22.14■■□□□ 1.14
XRCC1-205ENST00000595789 NPHP3Q7Z494 1330 aa22.13■■□□□ 1.13
XRCC1-205ENST00000595789 IFT172Q9UG01 1749 aa22.13■■□□□ 1.13
XRCC1-205ENST00000595789 FNBP4Q8N3X1 1017 aaPredicted RBP22.12■■□□□ 1.13
XRCC1-205ENST00000595789 RGS12O14924 1447 aa22.12■■□□□ 1.13
XRCC1-205ENST00000595789 PXDNQ92626 1479 aa22.11■■□□□ 1.13
XRCC1-205ENST00000595789 FOXO3O43524 673 aa22.11■■□□□ 1.13
XRCC1-205ENST00000595789 C14orf93Q9H972 538 aaKnown RBP22.11■■□□□ 1.13
XRCC1-205ENST00000595789 ACIN1Q9UKV3 1341 aaKnown RBP22.1■■□□□ 1.13
XRCC1-205ENST00000595789 SIRT1Q96EB6 747 aa22.1■■□□□ 1.13
XRCC1-205ENST00000595789 YTHDC2Q9H6S0 1430 aaKnown RBP22.1■■□□□ 1.13
XRCC1-205ENST00000595789 NUTM2FA1L443 756 aa22.09■■□□□ 1.13
XRCC1-205ENST00000595789 USP21Q9UK80 565 aa22.09■■□□□ 1.13
XRCC1-205ENST00000595789 COL22A1Q8NFW1 1626 aaPredicted RBP22.09■■□□□ 1.13
XRCC1-205ENST00000595789 MYOM2P54296 1465 aa22.09■■□□□ 1.13
XRCC1-205ENST00000595789 XPCQ01831 940 aaPredicted RBP22.08■■□□□ 1.13
XRCC1-205ENST00000595789 NRXN1Q9ULB1 1477 aa22.07■■□□□ 1.12
XRCC1-205ENST00000595789 KNDC1Q76NI1 1749 aa22.06■■□□□ 1.12
XRCC1-205ENST00000595789 CFAP70Q5T0N1 1121 aa22.05■■□□□ 1.12
XRCC1-205ENST00000595789 TRPC5Q9UL62 973 aaPredicted RBP22.05■■□□□ 1.12
XRCC1-205ENST00000595789 ATRNO75882 1429 aa22.03■■□□□ 1.12
XRCC1-205ENST00000595789 BCL9LQ86UU0 1499 aa22.02■■□□□ 1.12
XRCC1-205ENST00000595789 RAB3GAP2Q9H2M9 1393 aa22.01■■□□□ 1.11
XRCC1-205ENST00000595789 SPATA31A3Q5VYP0 1347 aa22.01■■□□□ 1.11
XRCC1-205ENST00000595789 DHX57Q6P158 1386 aaKnown RBP22■■□□□ 1.11
XRCC1-205ENST00000595789 FMN2Q9NZ56 1722 aa22■■□□□ 1.11
XRCC1-205ENST00000595789 KRT28Q7Z3Y7 464 aa21.98■■□□□ 1.11
XRCC1-205ENST00000595789 PRAM1Q96QH2 718 aa21.97■■□□□ 1.11
XRCC1-205ENST00000595789 PHF8Q9UPP1 1060 aa21.97■■□□□ 1.11
XRCC1-205ENST00000595789 SAFB2Q14151 953 aaKnown RBP eCLIP21.94■■□□□ 1.1
XRCC1-205ENST00000595789 ATAD2Q6PL18 1390 aa21.94■■□□□ 1.1
XRCC1-205ENST00000595789 KIF1AQ12756 1690 aa21.93■■□□□ 1.1
XRCC1-205ENST00000595789 GJD4Q96KN9 370 aaPredicted RBP21.93■■□□□ 1.1
XRCC1-205ENST00000595789 SLIT2O94813 1529 aa21.92■■□□□ 1.1
XRCC1-205ENST00000595789 DLC1Q96QB1 1528 aa21.92■■□□□ 1.1
XRCC1-205ENST00000595789 MARF1Q9Y4F3 1742 aaKnown RBP21.92■■□□□ 1.1
XRCC1-205ENST00000595789 UNC5CLQ8IV45 518 aa21.91■■□□□ 1.1
XRCC1-205ENST00000595789 ADGRB1O14514 1584 aa21.91■■□□□ 1.1
XRCC1-205ENST00000595789 EP400Q96L91 3159 aa21.9■■□□□ 1.1
XRCC1-205ENST00000595789 PSME1Q06323 249 aa21.9■■□□□ 1.1
XRCC1-205ENST00000595789 POGKQ9P215 609 aa21.9■■□□□ 1.1
XRCC1-205ENST00000595789 TNS3Q68CZ2 1445 aa21.89■■□□□ 1.1
XRCC1-205ENST00000595789 RGPD8O14715 1765 aaPredicted RBP21.89■■□□□ 1.09
XRCC1-205ENST00000595789 SRCAPQ6ZRS2 3230 aa21.89■■□□□ 1.09
XRCC1-205ENST00000595789 SBNO1A3KN83 1393 aa21.88■■□□□ 1.09
XRCC1-205ENST00000595789 HRCP23327 699 aa21.88■■□□□ 1.09
XRCC1-205ENST00000595789 CABLES1Q8TDN4 633 aa21.88■■□□□ 1.09
XRCC1-205ENST00000595789 TRAK1Q9UPV9 953 aa21.87■■□□□ 1.09
XRCC1-205ENST00000595789 ANKARQ7Z5J8 1434 aa21.87■■□□□ 1.09
XRCC1-205ENST00000595789 PMFBP1Q8TBY8 1022 aa21.86■■□□□ 1.09
XRCC1-205ENST00000595789 DCAF11Q8TEB1 546 aa21.86■■□□□ 1.09
XRCC1-205ENST00000595789 KDM2AQ9Y2K7 1162 aa21.86■■□□□ 1.09
XRCC1-205ENST00000595789 STAC3Q96MF2 364 aa21.85■■□□□ 1.09
XRCC1-205ENST00000595789 USP32Q8NFA0 1604 aa21.84■■□□□ 1.09
XRCC1-205ENST00000595789 RALGAPBQ86X10 1494 aa21.84■■□□□ 1.09
XRCC1-205ENST00000595789 TNKS1BP1Q9C0C2 1729 aaKnown RBP21.84■■□□□ 1.09
XRCC1-205ENST00000595789 PRR36Q9H6K5 1346 aa21.83■■□□□ 1.09
XRCC1-205ENST00000595789 ADGRB2O60241 1585 aa21.83■■□□□ 1.09
XRCC1-205ENST00000595789 GLI3P10071 1580 aa21.83■■□□□ 1.09
XRCC1-205ENST00000595789 HIRIP3Q9BW71 556 aaPredicted RBP21.83■■□□□ 1.09
XRCC1-205ENST00000595789 CCDC125Q86Z20 511 aa21.82■■□□□ 1.08
XRCC1-205ENST00000595789 ARHGEF10O15013 1369 aa21.82■■□□□ 1.08
XRCC1-205ENST00000595789 MINK1Q8N4C8 1332 aaPredicted RBP21.81■■□□□ 1.08
XRCC1-205ENST00000595789 VPS72Q15906 364 aa21.81■■□□□ 1.08
XRCC1-205ENST00000595789 WASLO00401 505 aaPredicted RBP21.8■■□□□ 1.08
XRCC1-205ENST00000595789 HAP1P54257 671 aaPredicted RBP21.8■■□□□ 1.08
XRCC1-205ENST00000595789 LMOD2Q6P5Q4 547 aa21.8■■□□□ 1.08
XRCC1-205ENST00000595789 FAM83GA6ND36 823 aa21.79■■□□□ 1.08
XRCC1-205ENST00000595789 ONECUT3O60422 494 aaPredicted RBP21.79■■□□□ 1.08
XRCC1-205ENST00000595789 PLEKHG5O94827 1062 aa21.79■■□□□ 1.08
XRCC1-205ENST00000595789 SEPT12Q8IYM1 358 aa21.76■■□□□ 1.07
XRCC1-205ENST00000595789 TULP4Q9NRJ4 1543 aa21.75■■□□□ 1.07
XRCC1-205ENST00000595789 EIF3AQ14152 1382 aaKnown RBP21.75■■□□□ 1.07
XRCC1-205ENST00000595789 ABCA3Q99758 1704 aa21.75■■□□□ 1.07
XRCC1-205ENST00000595789 TRPM3Q9HCF6 1732 aaPredicted RBP21.75■■□□□ 1.07
XRCC1-205ENST00000595789 GPRASP1Q5JY77 1395 aa21.74■■□□□ 1.07
XRCC1-205ENST00000595789 NWD2Q9ULI1 1742 aa21.72■■□□□ 1.07
XRCC1-205ENST00000595789 ZRANB1Q9UGI0 708 aa21.72■■□□□ 1.07
XRCC1-205ENST00000595789 NGDNQ8NEJ9 315 aaKnown RBP21.71■■□□□ 1.07
XRCC1-205ENST00000595789 PLCH1Q4KWH8 1693 aa21.71■■□□□ 1.07
XRCC1-205ENST00000595789 ALS2Q96Q42 1657 aa21.71■■□□□ 1.07
XRCC1-205ENST00000595789 BLMP54132 1417 aaPredicted RBP21.71■■□□□ 1.07
XRCC1-205ENST00000595789 NUDT16Q96DE0 195 aaKnown RBP21.7■■□□□ 1.06
XRCC1-205ENST00000595789 CCDC9Q9Y3X0 531 aaKnown RBP21.7■■□□□ 1.06
XRCC1-205ENST00000595789 BRWD3Q6RI45 1802 aa21.69■■□□□ 1.06
XRCC1-205ENST00000595789 BTG4Q9NY30 223 aa21.69■■□□□ 1.06
XRCC1-205ENST00000595789 ATP7BP35670 1465 aa21.68■■□□□ 1.06
XRCC1-205ENST00000595789 KRT27Q7Z3Y8 459 aa21.67■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms