RNA–Protein interactions for RNA: ENST00000594297.1

FOXA3-202, Transcript of forkhead box A3, humanhuman

TSL 3

Gene FOXA3, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA3-202ENST00000594297 FNBP4Q8N3X1 1017 aaPredicted RBP23.23■■□□□ 1.31
FOXA3-202ENST00000594297 PXDNQ92626 1479 aa23.22■■□□□ 1.31
FOXA3-202ENST00000594297 PPLO60437 1756 aa23.22■■□□□ 1.31
FOXA3-202ENST00000594297 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.2■■□□□ 1.3
FOXA3-202ENST00000594297 BCL9LQ86UU0 1499 aa23.19■■□□□ 1.3
FOXA3-202ENST00000594297 HFM1A2PYH4 1435 aa23.19■■□□□ 1.3
FOXA3-202ENST00000594297 ZRANB1Q9UGI0 708 aa23.18■■□□□ 1.3
FOXA3-202ENST00000594297 GLI3P10071 1580 aa23.14■■□□□ 1.3
FOXA3-202ENST00000594297 NPHP3Q7Z494 1330 aa23.14■■□□□ 1.3
FOXA3-202ENST00000594297 FOXD1Q16676 465 aa23.13■■□□□ 1.29
FOXA3-202ENST00000594297 VGFO15240 615 aaPredicted RBP23.12■■□□□ 1.29
FOXA3-202ENST00000594297 NAIPQ13075 1403 aa23.1■■□□□ 1.29
FOXA3-202ENST00000594297 XPCQ01831 940 aaPredicted RBP23.1■■□□□ 1.29
FOXA3-202ENST00000594297 ESCO1Q5FWF5 840 aa23.1■■□□□ 1.29
FOXA3-202ENST00000594297 BRWD3Q6RI45 1802 aa23.1■■□□□ 1.29
FOXA3-202ENST00000594297 USP32Q8NFA0 1604 aa23.09■■□□□ 1.29
FOXA3-202ENST00000594297 RALGAPBQ86X10 1494 aa23.09■■□□□ 1.29
FOXA3-202ENST00000594297 KNDC1Q76NI1 1749 aa23.08■■□□□ 1.29
FOXA3-202ENST00000594297 FMN2Q9NZ56 1722 aa23.08■■□□□ 1.29
FOXA3-202ENST00000594297 CCDC125Q86Z20 511 aa23.08■■□□□ 1.29
FOXA3-202ENST00000594297 GJD4Q96KN9 370 aaPredicted RBP23.08■■□□□ 1.29
FOXA3-202ENST00000594297 SLIT2O94813 1529 aa23.08■■□□□ 1.28
FOXA3-202ENST00000594297 KIF1AQ12756 1690 aa23.07■■□□□ 1.28
FOXA3-202ENST00000594297 BLMP54132 1417 aaPredicted RBP23.06■■□□□ 1.28
FOXA3-202ENST00000594297 RPGRIP1LQ68CZ1 1315 aa23.06■■□□□ 1.28
FOXA3-202ENST00000594297 IFT172Q9UG01 1749 aa23.05■■□□□ 1.28
FOXA3-202ENST00000594297 FOXO3O43524 673 aa23.05■■□□□ 1.28
FOXA3-202ENST00000594297 PLCH1Q4KWH8 1693 aa23.04■■□□□ 1.28
FOXA3-202ENST00000594297 TECPR2O15040 1411 aa23.04■■□□□ 1.28
FOXA3-202ENST00000594297 ABCA3Q99758 1704 aa23.03■■□□□ 1.28
FOXA3-202ENST00000594297 LRP5O75197 1615 aa23.03■■□□□ 1.28
FOXA3-202ENST00000594297 LRPPRCP42704 1394 aaKnown RBP23.01■■□□□ 1.27
FOXA3-202ENST00000594297 RRBP1Q9P2E9 1410 aaKnown RBP23.01■■□□□ 1.27
FOXA3-202ENST00000594297 NUTM2FA1L443 756 aa23.01■■□□□ 1.27
FOXA3-202ENST00000594297 TRIM26Q12899 539 aaPredicted RBP23■■□□□ 1.27
FOXA3-202ENST00000594297 UNC5CLQ8IV45 518 aa23■■□□□ 1.27
FOXA3-202ENST00000594297 PLEKHH1Q9ULM0 1364 aa22.99■■□□□ 1.27
FOXA3-202ENST00000594297 CCDC144AA2RUR9 1427 aa22.99■■□□□ 1.27
FOXA3-202ENST00000594297 NWD2Q9ULI1 1742 aa22.98■■□□□ 1.27
FOXA3-202ENST00000594297 SPATA31A3Q5VYP0 1347 aa22.98■■□□□ 1.27
FOXA3-202ENST00000594297 WAPLQ7Z5K2 1190 aa22.97■■□□□ 1.27
FOXA3-202ENST00000594297 DEFB132Q7Z7B7 95 aa22.97■■□□□ 1.27
FOXA3-202ENST00000594297 ADGRF5Q8IZF2 1346 aa22.97■■□□□ 1.27
FOXA3-202ENST00000594297 RGPD8O14715 1765 aaPredicted RBP22.96■■□□□ 1.27
FOXA3-202ENST00000594297 STK26Q9P289 416 aa22.95■■□□□ 1.26
FOXA3-202ENST00000594297 TNS3Q68CZ2 1445 aa22.94■■□□□ 1.26
FOXA3-202ENST00000594297 SLC4A1APQ9BWU0 796 aaKnown RBP22.94■■□□□ 1.26
FOXA3-202ENST00000594297 PIK3C2GO75747 1445 aa22.91■■□□□ 1.26
FOXA3-202ENST00000594297 SPATA31E1Q6ZUB1 1445 aa22.91■■□□□ 1.26
FOXA3-202ENST00000594297 NRAPQ86VF7 1730 aa22.91■■□□□ 1.26
FOXA3-202ENST00000594297 ABCC11Q96J66 1382 aa22.91■■□□□ 1.26
FOXA3-202ENST00000594297 SEPT12Q8IYM1 358 aa22.91■■□□□ 1.26
FOXA3-202ENST00000594297 YTHDC2Q9H6S0 1430 aaKnown RBP22.89■■□□□ 1.25
FOXA3-202ENST00000594297 SF3B2Q13435 895 aaKnown RBP22.88■■□□□ 1.25
FOXA3-202ENST00000594297 VPS72Q15906 364 aa22.88■■□□□ 1.25
FOXA3-202ENST00000594297 TMEM132EQ6IEE7 984 aa22.88■■□□□ 1.25
FOXA3-202ENST00000594297 KRT28Q7Z3Y7 464 aa22.88■■□□□ 1.25
FOXA3-202ENST00000594297 ANKRD30BQ9BXX2 1392 aa22.87■■□□□ 1.25
FOXA3-202ENST00000594297 NRXN1Q9ULB1 1477 aa22.86■■□□□ 1.25
FOXA3-202ENST00000594297 HAP1P54257 671 aaPredicted RBP22.86■■□□□ 1.25
FOXA3-202ENST00000594297 CABLES1Q8TDN4 633 aa22.86■■□□□ 1.25
FOXA3-202ENST00000594297 PLEKHG5O94827 1062 aa22.84■■□□□ 1.25
FOXA3-202ENST00000594297 RGL3Q3MIN7 710 aa22.84■■□□□ 1.25
FOXA3-202ENST00000594297 RGPD1P0DJD0 1748 aa22.83■■□□□ 1.25
FOXA3-202ENST00000594297 KRT27Q7Z3Y8 459 aa22.83■■□□□ 1.25
FOXA3-202ENST00000594297 CCDC9Q9Y3X0 531 aaKnown RBP22.83■■□□□ 1.25
FOXA3-202ENST00000594297 TRPM3Q9HCF6 1732 aaPredicted RBP22.82■■□□□ 1.24
FOXA3-202ENST00000594297 SBNO1A3KN83 1393 aa22.82■■□□□ 1.24
FOXA3-202ENST00000594297 PHF8Q9UPP1 1060 aa22.82■■□□□ 1.24
FOXA3-202ENST00000594297 PSDA5PKW4 1024 aaPredicted RBP22.81■■□□□ 1.24
FOXA3-202ENST00000594297 ONECUT3O60422 494 aaPredicted RBP22.81■■□□□ 1.24
FOXA3-202ENST00000594297 ARHGEF10O15013 1369 aa22.8■■□□□ 1.24
FOXA3-202ENST00000594297 TNS1Q9HBL0 1735 aaKnown RBP22.79■■□□□ 1.24
FOXA3-202ENST00000594297 ALS2Q96Q42 1657 aa22.79■■□□□ 1.24
FOXA3-202ENST00000594297 COL14A1Q05707 1796 aaKnown RBP22.78■■□□□ 1.24
FOXA3-202ENST00000594297 ADGRB2O60241 1585 aa22.78■■□□□ 1.24
FOXA3-202ENST00000594297 PSME1Q06323 249 aa22.78■■□□□ 1.24
FOXA3-202ENST00000594297 CRYBG1Q9Y4K1 1723 aa22.78■■□□□ 1.24
FOXA3-202ENST00000594297 A0A0G2JS52 829 aa22.77■■□□□ 1.24
FOXA3-202ENST00000594297 BAG6P46379 1132 aa22.77■■□□□ 1.24
FOXA3-202ENST00000594297 MYT1Q01538 1121 aa22.77■■□□□ 1.24
FOXA3-202ENST00000594297 LMOD2Q6P5Q4 547 aa22.77■■□□□ 1.24
FOXA3-202ENST00000594297 HRCP23327 699 aa22.76■■□□□ 1.23
FOXA3-202ENST00000594297 PCGF6Q9BYE7 350 aa22.76■■□□□ 1.23
FOXA3-202ENST00000594297 THSD7AQ9UPZ6 1657 aa22.76■■□□□ 1.23
FOXA3-202ENST00000594297 FAM83GA6ND36 823 aa22.74■■□□□ 1.23
FOXA3-202ENST00000594297 FAM98CQ17RN3 349 aaKnown RBP22.74■■□□□ 1.23
FOXA3-202ENST00000594297 SIRT1Q96EB6 747 aa22.74■■□□□ 1.23
FOXA3-202ENST00000594297 ANKARQ7Z5J8 1434 aa22.74■■□□□ 1.23
FOXA3-202ENST00000594297 DLC1Q96QB1 1528 aa22.72■■□□□ 1.23
FOXA3-202ENST00000594297 SAFB2Q14151 953 aaKnown RBP eCLIP22.72■■□□□ 1.23
FOXA3-202ENST00000594297 PMFBP1Q8TBY8 1022 aa22.7■■□□□ 1.22
FOXA3-202ENST00000594297 PRAM1Q96QH2 718 aa22.7■■□□□ 1.22
FOXA3-202ENST00000594297 C14orf93Q9H972 538 aaKnown RBP22.7■■□□□ 1.22
FOXA3-202ENST00000594297 DHX57Q6P158 1386 aaKnown RBP22.7■■□□□ 1.22
FOXA3-202ENST00000594297 DISP2A7MBM2 1401 aa22.7■■□□□ 1.22
FOXA3-202ENST00000594297 EN1Q05925 392 aaPredicted RBP22.69■■□□□ 1.22
FOXA3-202ENST00000594297 BTG4Q9NY30 223 aa22.69■■□□□ 1.22
FOXA3-202ENST00000594297 CFAP70Q5T0N1 1121 aa22.68■■□□□ 1.22
FOXA3-202ENST00000594297 FAM182BQ5T319 152 aa22.68■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms