RNA–Protein interactions for RNA: ENST00000592484.5

LRP3-204, Transcript of LDL receptor related protein 3, humanhuman

TSL 4

Gene LRP3, Length 575 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP3-204ENST00000592484 ORAI2Q96SN7 254 aa23.56■■□□□ 1.36
LRP3-204ENST00000592484 ABCC11Q96J66 1382 aa23.55■■□□□ 1.36
LRP3-204ENST00000592484 AFF2P51816 1311 aa23.54■■□□□ 1.36
LRP3-204ENST00000592484 CDK12Q9NYV4 1490 aaPredicted RBP23.52■■□□□ 1.36
LRP3-204ENST00000592484 RXRBP28702 533 aa23.52■■□□□ 1.36
LRP3-204ENST00000592484 STK26Q9P289 416 aa23.51■■□□□ 1.35
LRP3-204ENST00000592484 MYOM2P54296 1465 aa23.5■■□□□ 1.35
LRP3-204ENST00000592484 NRXN1Q9ULB1 1477 aa23.5■■□□□ 1.35
LRP3-204ENST00000592484 NPHP3Q7Z494 1330 aa23.5■■□□□ 1.35
LRP3-204ENST00000592484 RAB3GAP2Q9H2M9 1393 aa23.5■■□□□ 1.35
LRP3-204ENST00000592484 YTHDC2Q9H6S0 1430 aaKnown RBP23.5■■□□□ 1.35
LRP3-204ENST00000592484 C8orf37Q96NL8 207 aa23.49■■□□□ 1.35
LRP3-204ENST00000592484 COL22A1Q8NFW1 1626 aaPredicted RBP23.48■■□□□ 1.35
LRP3-204ENST00000592484 ESCO1Q5FWF5 840 aa23.48■■□□□ 1.35
LRP3-204ENST00000592484 TMEM132EQ6IEE7 984 aa23.48■■□□□ 1.35
LRP3-204ENST00000592484 WAPLQ7Z5K2 1190 aa23.48■■□□□ 1.35
LRP3-204ENST00000592484 SIRT1Q96EB6 747 aa23.47■■□□□ 1.35
LRP3-204ENST00000592484 C14orf93Q9H972 538 aaKnown RBP23.47■■□□□ 1.35
LRP3-204ENST00000592484 PXDNQ92626 1479 aa23.45■■□□□ 1.34
LRP3-204ENST00000592484 PLEKHH1Q9ULM0 1364 aa23.45■■□□□ 1.34
LRP3-204ENST00000592484 FMN2Q9NZ56 1722 aa23.45■■□□□ 1.34
LRP3-204ENST00000592484 ADAMTS2O95450 1211 aa23.43■■□□□ 1.34
LRP3-204ENST00000592484 NGLY1Q96IV0 654 aa23.43■■□□□ 1.34
LRP3-204ENST00000592484 QTRT2Q9H974 415 aaKnown RBP23.43■■□□□ 1.34
LRP3-204ENST00000592484 DHX57Q6P158 1386 aaKnown RBP23.42■■□□□ 1.34
LRP3-204ENST00000592484 KIF1AQ12756 1690 aa23.41■■□□□ 1.34
LRP3-204ENST00000592484 RBM6P78332 1123 aaKnown RBP23.41■■□□□ 1.34
LRP3-204ENST00000592484 FOXO3O43524 673 aa23.4■■□□□ 1.34
LRP3-204ENST00000592484 CFAP70Q5T0N1 1121 aa23.4■■□□□ 1.34
LRP3-204ENST00000592484 UPF1Q92900 1129 aaKnown RBP eCLIP23.4■■□□□ 1.345e-8■■■■□ 25
LRP3-204ENST00000592484 NUTM2FA1L443 756 aa23.38■■□□□ 1.33
LRP3-204ENST00000592484 RGS12O14924 1447 aa23.37■■□□□ 1.33
LRP3-204ENST00000592484 HRCP23327 699 aa23.37■■□□□ 1.33
LRP3-204ENST00000592484 FNBP4Q8N3X1 1017 aaPredicted RBP23.37■■□□□ 1.33
LRP3-204ENST00000592484 DLC1Q96QB1 1528 aa23.37■■□□□ 1.33
LRP3-204ENST00000592484 MARF1Q9Y4F3 1742 aaKnown RBP23.36■■□□□ 1.33
LRP3-204ENST00000592484 USP21Q9UK80 565 aa23.35■■□□□ 1.33
LRP3-204ENST00000592484 XPCQ01831 940 aaPredicted RBP23.34■■□□□ 1.33
LRP3-204ENST00000592484 TRPC5Q9UL62 973 aaPredicted RBP23.34■■□□□ 1.33
LRP3-204ENST00000592484 STAC3Q96MF2 364 aa23.33■■□□□ 1.33
LRP3-204ENST00000592484 ADGRB1O14514 1584 aa23.32■■□□□ 1.32
LRP3-204ENST00000592484 PRAM1Q96QH2 718 aa23.32■■□□□ 1.32
LRP3-204ENST00000592484 RGPD8O14715 1765 aaPredicted RBP23.31■■□□□ 1.32
LRP3-204ENST00000592484 ATRNO75882 1429 aa23.31■■□□□ 1.32
LRP3-204ENST00000592484 ADGRB2O60241 1585 aa23.31■■□□□ 1.32
LRP3-204ENST00000592484 SPATA31A3Q5VYP0 1347 aa23.31■■□□□ 1.32
LRP3-204ENST00000592484 POGKQ9P215 609 aa23.29■■□□□ 1.32
LRP3-204ENST00000592484 PHF8Q9UPP1 1060 aa23.29■■□□□ 1.32
LRP3-204ENST00000592484 KRT28Q7Z3Y7 464 aa23.28■■□□□ 1.32
LRP3-204ENST00000592484 ANKARQ7Z5J8 1434 aa23.27■■□□□ 1.32
LRP3-204ENST00000592484 BCL9LQ86UU0 1499 aa23.27■■□□□ 1.32
LRP3-204ENST00000592484 PSME1Q06323 249 aa23.26■■□□□ 1.31
LRP3-204ENST00000592484 SAFB2Q14151 953 aaKnown RBP eCLIP23.26■■□□□ 1.31
LRP3-204ENST00000592484 DCAF11Q8TEB1 546 aa23.26■■□□□ 1.31
LRP3-204ENST00000592484 TNS3Q68CZ2 1445 aa23.25■■□□□ 1.31
LRP3-204ENST00000592484 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.25■■□□□ 1.31
LRP3-204ENST00000592484 USP32Q8NFA0 1604 aa23.24■■□□□ 1.31
LRP3-204ENST00000592484 KDM2AQ9Y2K7 1162 aa23.24■■□□□ 1.31
LRP3-204ENST00000592484 SBNO1A3KN83 1393 aa23.24■■□□□ 1.31
LRP3-204ENST00000592484 TRAK1Q9UPV9 953 aa23.23■■□□□ 1.31
LRP3-204ENST00000592484 EIF3AQ14152 1382 aaKnown RBP23.23■■□□□ 1.31
LRP3-204ENST00000592484 ATAD2Q6PL18 1390 aa23.22■■□□□ 1.31
LRP3-204ENST00000592484 SLIT2O94813 1529 aa23.21■■□□□ 1.31
LRP3-204ENST00000592484 ARHGEF10O15013 1369 aa23.2■■□□□ 1.3
LRP3-204ENST00000592484 TULP4Q9NRJ4 1543 aa23.18■■□□□ 1.3
LRP3-204ENST00000592484 UNC5CLQ8IV45 518 aa23.18■■□□□ 1.3
LRP3-204ENST00000592484 GJD4Q96KN9 370 aaPredicted RBP23.18■■□□□ 1.3
LRP3-204ENST00000592484 ABCA3Q99758 1704 aa23.17■■□□□ 1.3
LRP3-204ENST00000592484 HAP1P54257 671 aaPredicted RBP23.16■■□□□ 1.3
LRP3-204ENST00000592484 HIRIP3Q9BW71 556 aaPredicted RBP23.16■■□□□ 1.3
LRP3-204ENST00000592484 ARHGEF28Q8N1W1 1705 aaKnown RBP23.16■■□□□ 1.3
LRP3-204ENST00000592484 MINK1Q8N4C8 1332 aaPredicted RBP23.15■■□□□ 1.3
LRP3-204ENST00000592484 PMFBP1Q8TBY8 1022 aa23.15■■□□□ 1.3
LRP3-204ENST00000592484 TRPM3Q9HCF6 1732 aaPredicted RBP23.15■■□□□ 1.3
LRP3-204ENST00000592484 NWD2Q9ULI1 1742 aa23.14■■□□□ 1.3
LRP3-204ENST00000592484 WASLO00401 505 aaPredicted RBP23.14■■□□□ 1.29
LRP3-204ENST00000592484 RALGAPBQ86X10 1494 aa23.13■■□□□ 1.29
LRP3-204ENST00000592484 LMOD2Q6P5Q4 547 aa23.13■■□□□ 1.29
LRP3-204ENST00000592484 KIAA1210Q9ULL0 1709 aa23.13■■□□□ 1.29
LRP3-204ENST00000592484 GPRASP1Q5JY77 1395 aa23.13■■□□□ 1.29
LRP3-204ENST00000592484 PRR36Q9H6K5 1346 aa23.12■■□□□ 1.29
LRP3-204ENST00000592484 GLI3P10071 1580 aa23.12■■□□□ 1.29
LRP3-204ENST00000592484 PLCH1Q4KWH8 1693 aa23.12■■□□□ 1.29
LRP3-204ENST00000592484 CABLES1Q8TDN4 633 aa23.11■■□□□ 1.29
LRP3-204ENST00000592484 ALS2Q96Q42 1657 aa23.11■■□□□ 1.29
LRP3-204ENST00000592484 ITSN1Q15811 1721 aa23.11■■□□□ 1.29
LRP3-204ENST00000592484 CCDC125Q86Z20 511 aa23.08■■□□□ 1.29
LRP3-204ENST00000592484 ATP7BP35670 1465 aa23.07■■□□□ 1.28
LRP3-204ENST00000592484 VPS72Q15906 364 aa23.07■■□□□ 1.28
LRP3-204ENST00000592484 NGDNQ8NEJ9 315 aaKnown RBP23.05■■□□□ 1.28
LRP3-204ENST00000592484 EP400Q96L91 3159 aa23.04■■□□□ 1.28
LRP3-204ENST00000592484 PLEKHG5O94827 1062 aa23.04■■□□□ 1.28
LRP3-204ENST00000592484 CRYBG1Q9Y4K1 1723 aa23.02■■□□□ 1.28
LRP3-204ENST00000592484 COL14A1Q05707 1796 aaKnown RBP23.02■■□□□ 1.28
LRP3-204ENST00000592484 FAM83GA6ND36 823 aa23.02■■□□□ 1.28
LRP3-204ENST00000592484 NUDT16Q96DE0 195 aaKnown RBP23.02■■□□□ 1.28
LRP3-204ENST00000592484 NRAPQ86VF7 1730 aa23.02■■□□□ 1.28
LRP3-204ENST00000592484 BRWD3Q6RI45 1802 aa23.01■■□□□ 1.27
LRP3-204ENST00000592484 TOPAZ1Q8N9V7 1692 aa23■■□□□ 1.27
LRP3-204ENST00000592484 ONECUT3O60422 494 aaPredicted RBP23■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 141.9 ms