RNA–Protein interactions for RNA: ENST00000592388.1

VAT1-209, Transcript of vesicle amine transport 1, humanhuman

TSL 5

Gene VAT1, Length 478 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-209ENST00000592388 MYT1Q01538 1121 aa11.58□□□□□ -0.56
VAT1-209ENST00000592388 XPCQ01831 940 aaPredicted RBP11.58□□□□□ -0.56
VAT1-209ENST00000592388 DAPK1P53355 1430 aa11.58□□□□□ -0.56
VAT1-209ENST00000592388 SPHKAPQ2M3C7 1700 aa11.57□□□□□ -0.56
VAT1-209ENST00000592388 XRN1Q8IZH2 1706 aaKnown RBP11.57□□□□□ -0.56
VAT1-209ENST00000592388 C1QTNF8P60827 252 aa11.57□□□□□ -0.56
VAT1-209ENST00000592388 EZH2Q15910 746 aaKnown RBP11.57□□□□□ -0.56
VAT1-209ENST00000592388 PPP1R1BQ9UD71 204 aaPredicted RBP11.57□□□□□ -0.56
VAT1-209ENST00000592388 CHIC2Q9UKJ5 165 aa11.57□□□□□ -0.56
VAT1-209ENST00000592388 LAMC1P11047 1609 aa11.57□□□□□ -0.56
VAT1-209ENST00000592388 METP08581 1390 aa11.56□□□□□ -0.56
VAT1-209ENST00000592388 SLIT2O94813 1529 aa11.56□□□□□ -0.56
VAT1-209ENST00000592388 NALCNQ8IZF0 1738 aa11.56□□□□□ -0.56
VAT1-209ENST00000592388 UTRNP46939 3433 aa11.56□□□□□ -0.56
VAT1-209ENST00000592388 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.55□□□□□ -0.56
VAT1-209ENST00000592388 MARF1Q9Y4F3 1742 aaKnown RBP11.55□□□□□ -0.56
VAT1-209ENST00000592388 ONECUT3O60422 494 aaPredicted RBP11.55□□□□□ -0.56
VAT1-209ENST00000592388 FAM182BQ5T319 152 aa11.55□□□□□ -0.56
VAT1-209ENST00000592388 RPRD2Q5VT52 1461 aaKnown RBP11.55□□□□□ -0.56
VAT1-209ENST00000592388 VPS72Q15906 364 aa11.54□□□□□ -0.56
VAT1-209ENST00000592388 NPHP3Q7Z494 1330 aa11.54□□□□□ -0.56
VAT1-209ENST00000592388 FOXO3O43524 673 aa11.53□□□□□ -0.56
VAT1-209ENST00000592388 ESCO1Q5FWF5 840 aa11.53□□□□□ -0.56
VAT1-209ENST00000592388 APLP2Q06481 763 aa11.52□□□□□ -0.57
VAT1-209ENST00000592388 NRXN3Q9Y4C0 1643 aa11.51□□□□□ -0.57
VAT1-209ENST00000592388 PLEKHG5O94827 1062 aa11.51□□□□□ -0.57
VAT1-209ENST00000592388 FAM98CQ17RN3 349 aaKnown RBP11.51□□□□□ -0.57
VAT1-209ENST00000592388 ANKRD30AQ9BXX3 1397 aa11.51□□□□□ -0.57
VAT1-209ENST00000592388 PXDNQ92626 1479 aa11.5□□□□□ -0.57
VAT1-209ENST00000592388 HAP1P54257 671 aaPredicted RBP11.49□□□□□ -0.57
VAT1-209ENST00000592388 CAMKK2Q96RR4 588 aa11.49□□□□□ -0.57
VAT1-209ENST00000592388 SPON1Q9HCB6 807 aa11.49□□□□□ -0.57
VAT1-209ENST00000592388 NINLQ9Y2I6 1382 aa11.49□□□□□ -0.57
VAT1-209ENST00000592388 ADGRL2O95490 1459 aa11.49□□□□□ -0.57
VAT1-209ENST00000592388 CAMTA1Q9Y6Y1 1673 aa11.49□□□□□ -0.57
VAT1-209ENST00000592388 ZNF326Q5BKZ1 582 aaKnown RBP11.48□□□□□ -0.57
VAT1-209ENST00000592388 DISP2A7MBM2 1401 aa11.48□□□□□ -0.57
VAT1-209ENST00000592388 RGPD1P0DJD0 1748 aa11.48□□□□□ -0.57
VAT1-209ENST00000592388 ROBO2Q9HCK4 1378 aa11.47□□□□□ -0.57
VAT1-209ENST00000592388 KCNQ2O43526 872 aa11.47□□□□□ -0.57
VAT1-209ENST00000592388 CABLES1Q8TDN4 633 aa11.47□□□□□ -0.57
VAT1-209ENST00000592388 NUTM2FA1L443 756 aa11.46□□□□□ -0.57
VAT1-209ENST00000592388 TRIM37O94972 964 aa11.46□□□□□ -0.57
VAT1-209ENST00000592388 APBA3O96018 575 aa11.45□□□□□ -0.58
VAT1-209ENST00000592388 NBPF8Q3BBV2 869 aa11.45□□□□□ -0.58
VAT1-209ENST00000592388 NBPF14Q5TI25 921 aa11.45□□□□□ -0.58
VAT1-209ENST00000592388 E9PCH4 1651 aa11.45□□□□□ -0.58
VAT1-209ENST00000592388 USP32Q8NFA0 1604 aa11.45□□□□□ -0.58
VAT1-209ENST00000592388 LRPPRCP42704 1394 aaKnown RBP11.44□□□□□ -0.58
VAT1-209ENST00000592388 SPATA31A3Q5VYP0 1347 aa11.44□□□□□ -0.58
VAT1-209ENST00000592388 FAM50AQ14320 339 aaKnown RBP11.43□□□□□ -0.58
VAT1-209ENST00000592388 TNS1Q9HBL0 1735 aaKnown RBP11.43□□□□□ -0.58
VAT1-209ENST00000592388 CEP350Q5VT06 3117 aa11.42□□□□□ -0.58
VAT1-209ENST00000592388 FAM83GA6ND36 823 aa11.42□□□□□ -0.58
VAT1-209ENST00000592388 ANKRD50Q9ULJ7 1429 aa11.42□□□□□ -0.58
VAT1-209ENST00000592388 IQGAP3Q86VI3 1631 aa11.42□□□□□ -0.58
VAT1-209ENST00000592388 PLCH1Q4KWH8 1693 aa11.41□□□□□ -0.58
VAT1-209ENST00000592388 GIGYF1O75420 1035 aaPredicted RBP11.41□□□□□ -0.58
VAT1-209ENST00000592388 PARD3Q8TEW0 1356 aa11.41□□□□□ -0.58
VAT1-209ENST00000592388 LMOD2Q6P5Q4 547 aa11.4□□□□□ -0.58
VAT1-209ENST00000592388 KRT28Q7Z3Y7 464 aa11.4□□□□□ -0.58
VAT1-209ENST00000592388 BTG4Q9NY30 223 aa11.4□□□□□ -0.58
VAT1-209ENST00000592388 ADGRB2O60241 1585 aa11.39□□□□□ -0.59
VAT1-209ENST00000592388 FAM196AQ6ZSG2 479 aa11.39□□□□□ -0.59
VAT1-209ENST00000592388 NWD2Q9ULI1 1742 aa11.39□□□□□ -0.59
VAT1-209ENST00000592388 HFM1A2PYH4 1435 aa11.37□□□□□ -0.59
VAT1-209ENST00000592388 NUP188Q5SRE5 1749 aa11.36□□□□□ -0.59
VAT1-209ENST00000592388 PPARGC1BQ86YN6 1023 aaKnown RBP11.36□□□□□ -0.59
VAT1-209ENST00000592388 SPATA31A5Q5VU36 1347 aa11.35□□□□□ -0.59
VAT1-209ENST00000592388 SPATA31A7Q8IWB4 1347 aa11.35□□□□□ -0.59
VAT1-209ENST00000592388 CCDC144AA2RUR9 1427 aa11.35□□□□□ -0.59
VAT1-209ENST00000592388 SYT17Q9BSW7 474 aa11.35□□□□□ -0.59
VAT1-209ENST00000592388 RREB1Q92766 1687 aa11.35□□□□□ -0.59
VAT1-209ENST00000592388 TNS3Q68CZ2 1445 aa11.35□□□□□ -0.59
VAT1-209ENST00000592388 CDC42BPGQ6DT37 1551 aa11.34□□□□□ -0.59
VAT1-209ENST00000592388 NRKQ7Z2Y5 1582 aa11.34□□□□□ -0.59
VAT1-209ENST00000592388 ZBTB7AO95365 584 aa11.34□□□□□ -0.59
VAT1-209ENST00000592388 PSME1Q06323 249 aa11.34□□□□□ -0.59
VAT1-209ENST00000592388 PDGFDQ9GZP0 370 aaPredicted RBP11.34□□□□□ -0.59
VAT1-209ENST00000592388 CHD4Q14839 1912 aa11.34□□□□□ -0.59
VAT1-209ENST00000592388 NAIPQ13075 1403 aa11.34□□□□□ -0.59
VAT1-209ENST00000592388 NRAPQ86VF7 1730 aa11.33□□□□□ -0.6
VAT1-209ENST00000592388 FHDC1Q9C0D6 1143 aaPredicted RBP11.33□□□□□ -0.6
VAT1-209ENST00000592388 ATF5Q9Y2D1 282 aaPredicted RBP11.33□□□□□ -0.6
VAT1-209ENST00000592388 NEXMIFQ5QGS0 1516 aa11.33□□□□□ -0.6
VAT1-209ENST00000592388 ROCK1Q13464 1354 aa11.32□□□□□ -0.6
VAT1-209ENST00000592388 ITGAEP38570 1179 aa11.32□□□□□ -0.6
VAT1-209ENST00000592388 WAPLQ7Z5K2 1190 aa11.32□□□□□ -0.6
VAT1-209ENST00000592388 NUP155O75694 1391 aa11.31□□□□□ -0.6
VAT1-209ENST00000592388 THSD7AQ9UPZ6 1657 aa11.31□□□□□ -0.6
VAT1-209ENST00000592388 PTGER2P43116 358 aa11.31□□□□□ -0.6
VAT1-209ENST00000592388 PRAG1Q86YV5 1406 aa11.3□□□□□ -0.6
VAT1-209ENST00000592388 PDE3BQ13370 1112 aa11.3□□□□□ -0.6
VAT1-209ENST00000592388 ANO8Q9HCE9 1232 aaPredicted RBP11.3□□□□□ -0.6
VAT1-209ENST00000592388 STK26Q9P289 416 aa11.3□□□□□ -0.6
VAT1-209ENST00000592388 PHF8Q9UPP1 1060 aa11.3□□□□□ -0.6
VAT1-209ENST00000592388 KIF1BO60333 1816 aa11.3□□□□□ -0.6
VAT1-209ENST00000592388 MYOM1P52179 1685 aa11.3□□□□□ -0.6
VAT1-209ENST00000592388 ARHGEF10O15013 1369 aa11.29□□□□□ -0.6
VAT1-209ENST00000592388 CLTCL1P53675 1640 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms