RNA–Protein interactions for RNA: ENST00000592186.5

SMAD4-214, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 1,306 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-214ENST00000592186 C19orf44Q9H6X5 657 aa14.92□□□□□ -0.02
SMAD4-214ENST00000592186 KNDC1Q76NI1 1749 aa14.92□□□□□ -0.02
SMAD4-214ENST00000592186 TMF1P82094 1093 aa14.92□□□□□ -0.02
SMAD4-214ENST00000592186 TESK2Q96S53 571 aa14.92□□□□□ -0.02
SMAD4-214ENST00000592186 EVC2Q86UK5 1308 aa14.91□□□□□ -0.02
SMAD4-214ENST00000592186 PUS7Q96PZ0 661 aaKnown RBP14.91□□□□□ -0.02
SMAD4-214ENST00000592186 TMEM94Q12767 1356 aa14.9□□□□□ -0.02
SMAD4-214ENST00000592186 PLEKHH1Q9ULM0 1364 aa14.9□□□□□ -0.02
SMAD4-214ENST00000592186 MINK1Q8N4C8 1332 aaPredicted RBP14.89□□□□□ -0.03
SMAD4-214ENST00000592186 LRRC7Q96NW7 1537 aa14.88□□□□□ -0.03
SMAD4-214ENST00000592186 ARHGEF28Q8N1W1 1705 aaKnown RBP14.88□□□□□ -0.03
SMAD4-214ENST00000592186 WASLO00401 505 aaPredicted RBP14.88□□□□□ -0.03
SMAD4-214ENST00000592186 ATF3P18847 181 aa14.88□□□□□ -0.03
SMAD4-214ENST00000592186 CADPS2Q86UW7 1296 aa14.87□□□□□ -0.03
SMAD4-214ENST00000592186 RBM33Q96EV2 1170 aaKnown RBP14.87□□□□□ -0.03
SMAD4-214ENST00000592186 HIRIP3Q9BW71 556 aaPredicted RBP14.87□□□□□ -0.03
SMAD4-214ENST00000592186 CDK19Q9BWU1 502 aa14.87□□□□□ -0.03
SMAD4-214ENST00000592186 MSH6P52701 1360 aa14.87□□□□□ -0.03
SMAD4-214ENST00000592186 ADGRL3Q9HAR2 1447 aa14.86□□□□□ -0.03
SMAD4-214ENST00000592186 LTBP4Q8N2S1 1624 aa14.86□□□□□ -0.03
SMAD4-214ENST00000592186 SRPK2P78362 688 aaKnown RBP14.85□□□□□ -0.03
SMAD4-214ENST00000592186 STRCP1A6NGW2 1772 aa14.85□□□□□ -0.03
SMAD4-214ENST00000592186 DCCP43146 1447 aa14.84□□□□□ -0.03
SMAD4-214ENST00000592186 ZNF316A6NFI3 1004 aaPredicted RBP14.83□□□□□ -0.04
SMAD4-214ENST00000592186 QRICH2Q9H0J4 1663 aa14.83□□□□□ -0.04
SMAD4-214ENST00000592186 CERKQ8TCT0 537 aa14.82□□□□□ -0.04
SMAD4-214ENST00000592186 CCDC61Q9Y6R9 512 aa14.82□□□□□ -0.04
SMAD4-214ENST00000592186 ATAD2Q6PL18 1390 aa14.81□□□□□ -0.04
SMAD4-214ENST00000592186 NUDT16Q96DE0 195 aaKnown RBP14.81□□□□□ -0.04
SMAD4-214ENST00000592186 CABP2Q9NPB3 220 aa14.81□□□□□ -0.04
SMAD4-214ENST00000592186 ADGRB2O60241 1585 aa14.81□□□□□ -0.04
SMAD4-214ENST00000592186 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.81□□□□□ -0.04
SMAD4-214ENST00000592186 IQSEC2Q5JU85 1478 aa14.81□□□□□ -0.04
SMAD4-214ENST00000592186 DISP3Q9P2K9 1392 aa14.79□□□□□ -0.04
SMAD4-214ENST00000592186 CDC42BPGQ6DT37 1551 aa14.79□□□□□ -0.04
SMAD4-214ENST00000592186 ANKARQ7Z5J8 1434 aa14.79□□□□□ -0.04
SMAD4-214ENST00000592186 TOM1O60784 492 aa14.79□□□□□ -0.04
SMAD4-214ENST00000592186 POTEDQ86YR6 584 aa14.79□□□□□ -0.04
SMAD4-214ENST00000592186 SLAIN2Q9P270 581 aa14.79□□□□□ -0.04
SMAD4-214ENST00000592186 C11orf95C9JLR9 678 aaPredicted RBP14.78□□□□□ -0.04
SMAD4-214ENST00000592186 KIF7Q2M1P5 1343 aa14.78□□□□□ -0.04
SMAD4-214ENST00000592186 NINLQ9Y2I6 1382 aa14.78□□□□□ -0.04
SMAD4-214ENST00000592186 TULP4Q9NRJ4 1543 aa14.77□□□□□ -0.04
SMAD4-214ENST00000592186 CCDC7Q96M83 1385 aa14.77□□□□□ -0.05
SMAD4-214ENST00000592186 PLEKHG3A1L390 1219 aa14.76□□□□□ -0.05
SMAD4-214ENST00000592186 MYT1Q01538 1121 aa14.76□□□□□ -0.05
SMAD4-214ENST00000592186 POLR3GLQ9BT43 218 aa14.76□□□□□ -0.05
SMAD4-214ENST00000592186 WASHC2AQ641Q2 1341 aa14.76□□□□□ -0.05
SMAD4-214ENST00000592186 NALCNQ8IZF0 1738 aa14.76□□□□□ -0.05
SMAD4-214ENST00000592186 NUTM2FA1L443 756 aa14.75□□□□□ -0.05
SMAD4-214ENST00000592186 ESCO1Q5FWF5 840 aa14.75□□□□□ -0.05
SMAD4-214ENST00000592186 TMC1Q8TDI8 760 aa14.75□□□□□ -0.05
SMAD4-214ENST00000592186 TERF2IPQ9NYB0 399 aa14.75□□□□□ -0.05
SMAD4-214ENST00000592186 ZNF692Q9BU19 519 aaPredicted RBP14.74□□□□□ -0.05
SMAD4-214ENST00000592186 CABP1Q9NZU7 370 aa14.74□□□□□ -0.05
SMAD4-214ENST00000592186 PHF8Q9UPP1 1060 aa14.74□□□□□ -0.05
SMAD4-214ENST00000592186 PRR36Q9H6K5 1346 aa14.74□□□□□ -0.05
SMAD4-214ENST00000592186 MST1RQ04912 1400 aa14.73□□□□□ -0.05
SMAD4-214ENST00000592186 C1orf167Q5SNV9 1468 aa14.73□□□□□ -0.05
SMAD4-214ENST00000592186 XIRP1Q702N8 1843 aaKnown RBP14.73□□□□□ -0.05
SMAD4-214ENST00000592186 UBAP1LF5GYI3 381 aa14.72□□□□□ -0.05
SMAD4-214ENST00000592186 HDGFL2Q7Z4V5 671 aaPredicted RBP14.72□□□□□ -0.05
SMAD4-214ENST00000592186 SLC12A5Q9H2X9 1139 aa14.72□□□□□ -0.05
SMAD4-214ENST00000592186 FMN2Q9NZ56 1722 aa14.72□□□□□ -0.05
SMAD4-214ENST00000592186 ATP7BP35670 1465 aa14.71□□□□□ -0.05
SMAD4-214ENST00000592186 PPIP5K1Q6PFW1 1433 aa14.71□□□□□ -0.05
SMAD4-214ENST00000592186 SCAF1Q9H7N4 1312 aaKnown RBP14.71□□□□□ -0.05
SMAD4-214ENST00000592186 NGDNQ8NEJ9 315 aaKnown RBP14.71□□□□□ -0.05
SMAD4-214ENST00000592186 ORAI2Q96SN7 254 aa14.7□□□□□ -0.06
SMAD4-214ENST00000592186 ACEP12821 1306 aa14.69□□□□□ -0.06
SMAD4-214ENST00000592186 PSME1Q06323 249 aa14.68□□□□□ -0.06
SMAD4-214ENST00000592186 BRINP3Q76B58 766 aa14.68□□□□□ -0.06
SMAD4-214ENST00000592186 PMFBP1Q8TBY8 1022 aa14.68□□□□□ -0.06
SMAD4-214ENST00000592186 PANK3Q9H999 370 aa14.68□□□□□ -0.06
SMAD4-214ENST00000592186 POLR3AO14802 1390 aaPredicted RBP14.68□□□□□ -0.06
SMAD4-214ENST00000592186 NPHP3Q7Z494 1330 aa14.68□□□□□ -0.06
SMAD4-214ENST00000592186 BRD4O60885 1362 aaPredicted RBP14.67□□□□□ -0.06
SMAD4-214ENST00000592186 ANKRD36BQ8N2N9 1353 aa14.67□□□□□ -0.06
SMAD4-214ENST00000592186 FOXO3O43524 673 aa14.66□□□□□ -0.06
SMAD4-214ENST00000592186 DDX10Q13206 875 aaKnown RBP14.66□□□□□ -0.06
SMAD4-214ENST00000592186 USP32Q8NFA0 1604 aa14.65□□□□□ -0.06
SMAD4-214ENST00000592186 CPSF1Q10570 1443 aaKnown RBP14.65□□□□□ -0.06
SMAD4-214ENST00000592186 PIP4K2BP78356 416 aa14.65□□□□□ -0.06
SMAD4-214ENST00000592186 KRT28Q7Z3Y7 464 aa14.65□□□□□ -0.06
SMAD4-214ENST00000592186 ITSN1Q15811 1721 aa14.64□□□□□ -0.07
SMAD4-214ENST00000592186 KTN1Q86UP2 1357 aaKnown RBP14.64□□□□□ -0.07
SMAD4-214ENST00000592186 KNSTRNQ9Y448 316 aa14.64□□□□□ -0.07
SMAD4-214ENST00000592186 A0A1W2PP64 1363 aa14.62□□□□□ -0.07
SMAD4-214ENST00000592186 KIF1AQ12756 1690 aa14.62□□□□□ -0.07
SMAD4-214ENST00000592186 TOPAZ1Q8N9V7 1692 aa14.62□□□□□ -0.07
SMAD4-214ENST00000592186 CARD14Q9BXL6 1004 aa14.62□□□□□ -0.07
SMAD4-214ENST00000592186 TTC21AQ8NDW8 1320 aa14.61□□□□□ -0.07
SMAD4-214ENST00000592186 EDC4Q6P2E9 1401 aaKnown RBP14.61□□□□□ -0.07
SMAD4-214ENST00000592186 PER1O15534 1290 aaPredicted RBP14.61□□□□□ -0.07
SMAD4-214ENST00000592186 CD163L1Q9NR16 1453 aa14.61□□□□□ -0.07
SMAD4-214ENST00000592186 SOS2Q07890 1332 aaPredicted RBP14.6□□□□□ -0.07
SMAD4-214ENST00000592186 CGNL1Q0VF96 1302 aa14.6□□□□□ -0.07
SMAD4-214ENST00000592186 USP6P35125 1406 aa14.6□□□□□ -0.07
SMAD4-214ENST00000592186 RGPD8O14715 1765 aaPredicted RBP14.6□□□□□ -0.07
SMAD4-214ENST00000592186 SBNO1A3KN83 1393 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms