RNA–Protein interactions for RNA: ENST00000592060.5

MBD1-227, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best)

Gene MBD1, Length 1,952 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-227ENST00000592060 ZNF521Q96K83 1311 aa20.93■□□□□ 0.94
MBD1-227ENST00000592060 SETD1AO15047 1707 aaKnown RBP20.92■□□□□ 0.94
MBD1-227ENST00000592060 POLR3AO14802 1390 aaPredicted RBP20.92■□□□□ 0.94
MBD1-227ENST00000592060 A2ML1A8K2U0 1454 aa20.92■□□□□ 0.94
MBD1-227ENST00000592060 YTHDC2Q9H6S0 1430 aaKnown RBP20.91■□□□□ 0.94
MBD1-227ENST00000592060 ANKRD36BQ8N2N9 1353 aa20.9■□□□□ 0.94
MBD1-227ENST00000592060 NINLQ9Y2I6 1382 aa20.87■□□□□ 0.93
MBD1-227ENST00000592060 NSD2O96028 1365 aa20.86■□□□□ 0.93
MBD1-227ENST00000592060 DLC1Q96QB1 1528 aa20.85■□□□□ 0.93
MBD1-227ENST00000592060 MORC1Q86VD1 984 aa20.85■□□□□ 0.93
MBD1-227ENST00000592060 STK26Q9P289 416 aa20.85■□□□□ 0.93
MBD1-227ENST00000592060 CGNL1Q0VF96 1302 aa20.84■□□□□ 0.93
MBD1-227ENST00000592060 RIMS2Q9UQ26 1411 aa20.84■□□□□ 0.93
MBD1-227ENST00000592060 CCDC136Q96JN2 1154 aa20.84■□□□□ 0.93
MBD1-227ENST00000592060 CABP2Q9NPB3 220 aa20.84■□□□□ 0.93
MBD1-227ENST00000592060 NRXN3Q9Y4C0 1643 aa20.84■□□□□ 0.93
MBD1-227ENST00000592060 ANKRD26Q9UPS8 1709 aa20.84■□□□□ 0.93
MBD1-227ENST00000592060 DUSP27Q5VZP5 1158 aa20.83■□□□□ 0.92
MBD1-227ENST00000592060 CCDC146Q8IYE0 955 aa20.83■□□□□ 0.92
MBD1-227ENST00000592060 SAFB2Q14151 953 aaKnown RBP eCLIP20.82■□□□□ 0.92
MBD1-227ENST00000592060 STAG3Q9UJ98 1225 aa20.81■□□□□ 0.92
MBD1-227ENST00000592060 ATAD2Q6PL18 1390 aa20.81■□□□□ 0.92
MBD1-227ENST00000592060 GOLGA2Q08379 1002 aa20.81■□□□□ 0.92
MBD1-227ENST00000592060 EXOC6Q8TAG9 804 aa20.81■□□□□ 0.92
MBD1-227ENST00000592060 SENP3Q9H4L4 574 aaPredicted RBP20.81■□□□□ 0.92
MBD1-227ENST00000592060 A0A1W2PP64 1363 aa20.8■□□□□ 0.92
MBD1-227ENST00000592060 ABCC11Q96J66 1382 aa20.8■□□□□ 0.92
MBD1-227ENST00000592060 MLECQ14165 292 aa20.8■□□□□ 0.92
MBD1-227ENST00000592060 PRAM1Q96QH2 718 aa20.8■□□□□ 0.92
MBD1-227ENST00000592060 CD163L1Q9NR16 1453 aa20.8■□□□□ 0.92
MBD1-227ENST00000592060 TRMT2AQ8IZ69 625 aaKnown RBP20.79■□□□□ 0.92
MBD1-227ENST00000592060 IQSEC2Q5JU85 1478 aa20.78■□□□□ 0.92
MBD1-227ENST00000592060 APAF1O14727 1248 aa20.78■□□□□ 0.92
MBD1-227ENST00000592060 SLFN5Q08AF3 891 aa20.78■□□□□ 0.92
MBD1-227ENST00000592060 NGEFQ8N5V2 710 aa20.77■□□□□ 0.92
MBD1-227ENST00000592060 MINK1Q8N4C8 1332 aaPredicted RBP20.77■□□□□ 0.92
MBD1-227ENST00000592060 ZMYM3Q14202 1370 aa20.77■□□□□ 0.91
MBD1-227ENST00000592060 SRPK2P78362 688 aaKnown RBP20.76■□□□□ 0.91
MBD1-227ENST00000592060 POGKQ9P215 609 aa20.76■□□□□ 0.91
MBD1-227ENST00000592060 MED14O60244 1454 aa20.75■□□□□ 0.91
MBD1-227ENST00000592060 KNDC1Q76NI1 1749 aa20.75■□□□□ 0.91
MBD1-227ENST00000592060 NLRP1Q9C000 1473 aa20.75■□□□□ 0.91
MBD1-227ENST00000592060 KIF20BQ96Q89 1820 aa20.75■□□□□ 0.91
MBD1-227ENST00000592060 TNNT2P45379 298 aaPredicted RBP20.74■□□□□ 0.91
MBD1-227ENST00000592060 UBR1Q8IWV7 1749 aa20.73■□□□□ 0.91
MBD1-227ENST00000592060 PLIN1O60240 522 aa20.73■□□□□ 0.91
MBD1-227ENST00000592060 MTHFSP49914 203 aa20.72■□□□□ 0.91
MBD1-227ENST00000592060 NKTRP30414 1462 aaKnown RBP20.72■□□□□ 0.91
MBD1-227ENST00000592060 SPINK5Q9NQ38 1064 aaPredicted RBP20.72■□□□□ 0.91
MBD1-227ENST00000592060 TNRQ92752 1358 aa20.7■□□□□ 0.9
MBD1-227ENST00000592060 FANCIQ9NVI1 1328 aa20.7■□□□□ 0.9
MBD1-227ENST00000592060 COL3A1P02461 1466 aaPredicted RBP20.7■□□□□ 0.9
MBD1-227ENST00000592060 ADGRB2O60241 1585 aa20.7■□□□□ 0.9
MBD1-227ENST00000592060 E9PSI1 815 aa20.69■□□□□ 0.9
MBD1-227ENST00000592060 CFAP53Q96M91 514 aa20.69■□□□□ 0.9
MBD1-227ENST00000592060 CRBNQ96SW2 442 aa20.69■□□□□ 0.9
MBD1-227ENST00000592060 CDK19Q9BWU1 502 aa20.69■□□□□ 0.9
MBD1-227ENST00000592060 TERF2IPQ9NYB0 399 aa20.69■□□□□ 0.9
MBD1-227ENST00000592060 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.68■□□□□ 0.9
MBD1-227ENST00000592060 RUNDC1Q96C34 613 aa20.68■□□□□ 0.9
MBD1-227ENST00000592060 DMRT2Q9Y5R5 561 aa20.68■□□□□ 0.9
MBD1-227ENST00000592060 ESF1Q9H501 851 aaKnown RBP20.68■□□□□ 0.9
MBD1-227ENST00000592060 ATP7BP35670 1465 aa20.68■□□□□ 0.9
MBD1-227ENST00000592060 CPS1P31327 1500 aa20.67■□□□□ 0.9
MBD1-227ENST00000592060 METP08581 1390 aa20.66■□□□□ 0.9
MBD1-227ENST00000592060 TECPR2O15040 1411 aa20.66■□□□□ 0.9
MBD1-227ENST00000592060 C20orf194Q5TEA3 1177 aa20.65■□□□□ 0.9
MBD1-227ENST00000592060 WWC1Q8IX03 1113 aa20.65■□□□□ 0.9
MBD1-227ENST00000592060 PHF23Q9BUL5 403 aaPredicted RBP20.65■□□□□ 0.9
MBD1-227ENST00000592060 FYB1O15117 783 aa20.65■□□□□ 0.9
MBD1-227ENST00000592060 WAPLQ7Z5K2 1190 aa20.65■□□□□ 0.9
MBD1-227ENST00000592060 GGNBP2Q9H3C7 697 aa20.64■□□□□ 0.89
MBD1-227ENST00000592060 FAM135BQ49AJ0 1406 aa20.63■□□□□ 0.89
MBD1-227ENST00000592060 HDGFL2Q7Z4V5 671 aaPredicted RBP20.63■□□□□ 0.89
MBD1-227ENST00000592060 TCP11L2Q8N4U5 519 aa20.62■□□□□ 0.89
MBD1-227ENST00000592060 TMEM2Q9UHN6 1383 aa20.62■□□□□ 0.89
MBD1-227ENST00000592060 NCBP3Q53F19 620 aaKnown RBP20.61■□□□□ 0.89
MBD1-227ENST00000592060 CABP1Q9NZU7 370 aa20.61■□□□□ 0.89
MBD1-227ENST00000592060 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.61■□□□□ 0.89
MBD1-227ENST00000592060 CCDC27Q2M243 656 aa20.59■□□□□ 0.89
MBD1-227ENST00000592060 MON2Q7Z3U7 1717 aa20.59■□□□□ 0.89
MBD1-227ENST00000592060 SIRT1Q96EB6 747 aa20.59■□□□□ 0.89
MBD1-227ENST00000592060 CDC42BPGQ6DT37 1551 aa20.59■□□□□ 0.89
MBD1-227ENST00000592060 RRP7AQ9Y3A4 280 aaKnown RBP20.58■□□□□ 0.89
MBD1-227ENST00000592060 C3P01024 1663 aa20.58■□□□□ 0.88
MBD1-227ENST00000592060 CPSF1Q10570 1443 aaKnown RBP20.57■□□□□ 0.88
MBD1-227ENST00000592060 ADAMTS13Q76LX8 1427 aa20.57■□□□□ 0.88
MBD1-227ENST00000592060 HDGFP51858 240 aaKnown RBP20.57■□□□□ 0.88
MBD1-227ENST00000592060 AKAP12Q02952 1782 aa20.57■□□□□ 0.88
MBD1-227ENST00000592060 PNPLA6Q8IY17 1366 aa20.57■□□□□ 0.88
MBD1-227ENST00000592060 WDR63Q8IWG1 891 aa20.57■□□□□ 0.88
MBD1-227ENST00000592060 WASLO00401 505 aaPredicted RBP20.56■□□□□ 0.88
MBD1-227ENST00000592060 MSH5O43196 834 aa20.56■□□□□ 0.88
MBD1-227ENST00000592060 U2AF1L5P0DN76 240 aaPredicted RBP20.56■□□□□ 0.88
MBD1-227ENST00000592060 U2AF1Q01081 240 aaKnown RBP eCLIP20.56■□□□□ 0.88
MBD1-227ENST00000592060 KDM4FA0A1W2PPD8 638 aa20.55■□□□□ 0.88
MBD1-227ENST00000592060 PPIP5K1Q6PFW1 1433 aa20.55■□□□□ 0.88
MBD1-227ENST00000592060 ITSN1Q15811 1721 aa20.55■□□□□ 0.88
MBD1-227ENST00000592060 ILDR1Q86SU0 546 aaPredicted RBP20.54■□□□□ 0.88
MBD1-227ENST00000592060 EDC4Q6P2E9 1401 aaKnown RBP20.54■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms