RNA–Protein interactions for RNA: ENST00000592012.5

MBD3-209, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 5

Gene MBD3, Length 2,379 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-209ENST00000592012 CABP2Q9NPB3 220 aa26.1■■□□□ 1.77
MBD3-209ENST00000592012 ARHGEF40Q8TER5 1519 aa26.1■■□□□ 1.77
MBD3-209ENST00000592012 POLR3AO14802 1390 aaPredicted RBP26.1■■□□□ 1.77
MBD3-209ENST00000592012 USP32Q8NFA0 1604 aa26.09■■□□□ 1.77
MBD3-209ENST00000592012 PTPRMP28827 1452 aa26.09■■□□□ 1.77
MBD3-209ENST00000592012 YTHDC2Q9H6S0 1430 aaKnown RBP26.09■■□□□ 1.77
MBD3-209ENST00000592012 ANKRD36BQ8N2N9 1353 aa26.08■■□□□ 1.77
MBD3-209ENST00000592012 ALKQ9UM73 1620 aa26.08■■□□□ 1.77
MBD3-209ENST00000592012 CGNL1Q0VF96 1302 aa26.08■■□□□ 1.77
MBD3-209ENST00000592012 CCDC136Q96JN2 1154 aa26.07■■□□□ 1.76
MBD3-209ENST00000592012 A2ML1A8K2U0 1454 aa26.07■■□□□ 1.76
MBD3-209ENST00000592012 CCDC146Q8IYE0 955 aa26.06■■□□□ 1.76
MBD3-209ENST00000592012 PRAM1Q96QH2 718 aa26.05■■□□□ 1.76
MBD3-209ENST00000592012 DUSP27Q5VZP5 1158 aa26.04■■□□□ 1.76
MBD3-209ENST00000592012 GOLGA2Q08379 1002 aa26.03■■□□□ 1.76
MBD3-209ENST00000592012 APAF1O14727 1248 aa26.03■■□□□ 1.76
MBD3-209ENST00000592012 TNNT2P45379 298 aaPredicted RBP26.02■■□□□ 1.76
MBD3-209ENST00000592012 SRPK2P78362 688 aaKnown RBP26.02■■□□□ 1.76
MBD3-209ENST00000592012 POGKQ9P215 609 aa26.02■■□□□ 1.76
MBD3-209ENST00000592012 NINLQ9Y2I6 1382 aa26.02■■□□□ 1.76
MBD3-209ENST00000592012 EXOC6Q8TAG9 804 aa26.01■■□□□ 1.75
MBD3-209ENST00000592012 ZMYM3Q14202 1370 aa26■■□□□ 1.75
MBD3-209ENST00000592012 MINK1Q8N4C8 1332 aaPredicted RBP26■■□□□ 1.75
MBD3-209ENST00000592012 RIMS2Q9UQ26 1411 aa26■■□□□ 1.75
MBD3-209ENST00000592012 NSD2O96028 1365 aa26■■□□□ 1.75
MBD3-209ENST00000592012 SLFN5Q08AF3 891 aa25.98■■□□□ 1.75
MBD3-209ENST00000592012 A0A1W2PP64 1363 aa25.97■■□□□ 1.75
MBD3-209ENST00000592012 ATAD2Q6PL18 1390 aa25.97■■□□□ 1.75
MBD3-209ENST00000592012 TRMT2AQ8IZ69 625 aaKnown RBP25.97■■□□□ 1.75
MBD3-209ENST00000592012 NGEFQ8N5V2 710 aa25.97■■□□□ 1.75
MBD3-209ENST00000592012 ESF1Q9H501 851 aaKnown RBP25.97■■□□□ 1.75
MBD3-209ENST00000592012 MTHFSP49914 203 aa25.96■■□□□ 1.75
MBD3-209ENST00000592012 SHPRHQ149N8 1683 aa25.96■■□□□ 1.75
MBD3-209ENST00000592012 PLIN1O60240 522 aa25.96■■□□□ 1.75
MBD3-209ENST00000592012 ABCC11Q96J66 1382 aa25.94■■□□□ 1.74
MBD3-209ENST00000592012 SETD1AO15047 1707 aaKnown RBP25.92■■□□□ 1.74
MBD3-209ENST00000592012 CDK19Q9BWU1 502 aa25.92■■□□□ 1.74
MBD3-209ENST00000592012 SPINK5Q9NQ38 1064 aaPredicted RBP25.92■■□□□ 1.74
MBD3-209ENST00000592012 TERF2IPQ9NYB0 399 aa25.91■■□□□ 1.74
MBD3-209ENST00000592012 CD163L1Q9NR16 1453 aa25.91■■□□□ 1.74
MBD3-209ENST00000592012 DLC1Q96QB1 1528 aa25.91■■□□□ 1.74
MBD3-209ENST00000592012 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.89■■□□□ 1.74
MBD3-209ENST00000592012 CFAP53Q96M91 514 aa25.89■■□□□ 1.74
MBD3-209ENST00000592012 WAPLQ7Z5K2 1190 aa25.88■■□□□ 1.73
MBD3-209ENST00000592012 E9PSI1 815 aa25.87■■□□□ 1.73
MBD3-209ENST00000592012 RUNDC1Q96C34 613 aa25.87■■□□□ 1.73
MBD3-209ENST00000592012 NRXN3Q9Y4C0 1643 aa25.86■■□□□ 1.73
MBD3-209ENST00000592012 DMRT2Q9Y5R5 561 aa25.86■■□□□ 1.73
MBD3-209ENST00000592012 FYB1O15117 783 aa25.85■■□□□ 1.73
MBD3-209ENST00000592012 WWC1Q8IX03 1113 aa25.85■■□□□ 1.73
MBD3-209ENST00000592012 GGNBP2Q9H3C7 697 aa25.85■■□□□ 1.73
MBD3-209ENST00000592012 CRBNQ96SW2 442 aa25.84■■□□□ 1.73
MBD3-209ENST00000592012 CABP1Q9NZU7 370 aa25.84■■□□□ 1.73
MBD3-209ENST00000592012 TNRQ92752 1358 aa25.84■■□□□ 1.73
MBD3-209ENST00000592012 NKTRP30414 1462 aaKnown RBP25.84■■□□□ 1.73
MBD3-209ENST00000592012 TRHP20396 242 aaPredicted RBP25.83■■□□□ 1.73
MBD3-209ENST00000592012 C20orf194Q5TEA3 1177 aa25.83■■□□□ 1.73
MBD3-209ENST00000592012 NLRP1Q9C000 1473 aa25.82■■□□□ 1.72
MBD3-209ENST00000592012 HDGFL2Q7Z4V5 671 aaPredicted RBP25.82■■□□□ 1.72
MBD3-209ENST00000592012 METP08581 1390 aa25.82■■□□□ 1.72
MBD3-209ENST00000592012 MED14O60244 1454 aa25.82■■□□□ 1.72
MBD3-209ENST00000592012 HDGFP51858 240 aaKnown RBP25.82■■□□□ 1.72
MBD3-209ENST00000592012 TCP11L2Q8N4U5 519 aa25.81■■□□□ 1.72
MBD3-209ENST00000592012 FANCIQ9NVI1 1328 aa25.8■■□□□ 1.72
MBD3-209ENST00000592012 IQSEC2Q5JU85 1478 aa25.8■■□□□ 1.72
MBD3-209ENST00000592012 PHF23Q9BUL5 403 aaPredicted RBP25.8■■□□□ 1.72
MBD3-209ENST00000592012 ANKRD26Q9UPS8 1709 aa25.78■■□□□ 1.72
MBD3-209ENST00000592012 GOLGA6L2Q8N9W4 650 aaPredicted RBP25.77■■□□□ 1.72
MBD3-209ENST00000592012 NEUROD2Q15784 382 aa25.77■■□□□ 1.72
MBD3-209ENST00000592012 RRP7AQ9Y3A4 280 aaKnown RBP25.77■■□□□ 1.72
MBD3-209ENST00000592012 TMEM2Q9UHN6 1383 aa25.76■■□□□ 1.71
MBD3-209ENST00000592012 U2AF1L5P0DN76 240 aaPredicted RBP25.76■■□□□ 1.71
MBD3-209ENST00000592012 U2AF1Q01081 240 aaKnown RBP eCLIP25.76■■□□□ 1.71
MBD3-209ENST00000592012 UBR1Q8IWV7 1749 aa25.75■■□□□ 1.71
MBD3-209ENST00000592012 TXNDC2Q86VQ3 553 aa25.75■■□□□ 1.71
MBD3-209ENST00000592012 CCDC27Q2M243 656 aa25.74■■□□□ 1.71
MBD3-209ENST00000592012 SIRT1Q96EB6 747 aa25.74■■□□□ 1.71
MBD3-209ENST00000592012 WASLO00401 505 aaPredicted RBP25.74■■□□□ 1.71
MBD3-209ENST00000592012 NCBP3Q53F19 620 aaKnown RBP25.74■■□□□ 1.71
MBD3-209ENST00000592012 ATP7BP35670 1465 aa25.73■■□□□ 1.71
MBD3-209ENST00000592012 COL3A1P02461 1466 aaPredicted RBP25.72■■□□□ 1.71
MBD3-209ENST00000592012 TECPR2O15040 1411 aa25.72■■□□□ 1.71
MBD3-209ENST00000592012 WDR63Q8IWG1 891 aa25.72■■□□□ 1.71
MBD3-209ENST00000592012 FAM135BQ49AJ0 1406 aa25.72■■□□□ 1.71
MBD3-209ENST00000592012 BCAR3O75815 825 aa25.71■■□□□ 1.71
MBD3-209ENST00000592012 KIF20BQ96Q89 1820 aa25.7■■□□□ 1.7
MBD3-209ENST00000592012 KNDC1Q76NI1 1749 aa25.7■■□□□ 1.7
MBD3-209ENST00000592012 PNPLA6Q8IY17 1366 aa25.68■■□□□ 1.7
MBD3-209ENST00000592012 SUGP2Q8IX01 1082 aaKnown RBP eCLIP25.67■■□□□ 1.7
MBD3-209ENST00000592012 PLEKHF1Q96S99 279 aa25.67■■□□□ 1.7
MBD3-209ENST00000592012 CPSF1Q10570 1443 aaKnown RBP25.67■■□□□ 1.7
MBD3-209ENST00000592012 ADGRB2O60241 1585 aa25.67■■□□□ 1.7
MBD3-209ENST00000592012 MSH5O43196 834 aa25.66■■□□□ 1.7
MBD3-209ENST00000592012 CEBPAP49715 358 aaPredicted RBP25.66■■□□□ 1.7
MBD3-209ENST00000592012 U2SURPO15042 1029 aaKnown RBP25.66■■□□□ 1.7
MBD3-209ENST00000592012 PPIP5K1Q6PFW1 1433 aa25.65■■□□□ 1.7
MBD3-209ENST00000592012 ADAMTS13Q76LX8 1427 aa25.65■■□□□ 1.7
MBD3-209ENST00000592012 CPS1P31327 1500 aa25.65■■□□□ 1.7
MBD3-209ENST00000592012 LTKP29376 864 aa25.64■■□□□ 1.7
MBD3-209ENST00000592012 NUDT16Q96DE0 195 aaKnown RBP25.64■■□□□ 1.7
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