RNA–Protein interactions for RNA: ENST00000591545.5

SMARCA4-216, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 5,193 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-216ENST00000591545 TOM1L2Q6ZVM7 507 aa16.29■□□□□ 0.2
SMARCA4-216ENST00000591545 TPM3P06753 285 aa16.29■□□□□ 0.2
SMARCA4-216ENST00000591545 PRDM11Q9NQV5 511 aa16.29■□□□□ 0.2
SMARCA4-216ENST00000591545 G3BP1Q13283 466 aaKnown RBP eCLIP16.29■□□□□ 0.25e-7■□□□□ 10
SMARCA4-216ENST00000591545 VPS53Q5VIR6 699 aa16.29■□□□□ 0.2
SMARCA4-216ENST00000591545 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.28■□□□□ 0.2
SMARCA4-216ENST00000591545 HMGB2P26583 209 aaKnown RBP16.28■□□□□ 0.2
SMARCA4-216ENST00000591545 CDK19Q9BWU1 502 aa16.28■□□□□ 0.2
SMARCA4-216ENST00000591545 HSP90AA2PQ14568 343 aaPredicted RBP16.27■□□□□ 0.2
SMARCA4-216ENST00000591545 DMRT2Q9Y5R5 561 aa16.27■□□□□ 0.2
SMARCA4-216ENST00000591545 CUL7Q14999 1698 aa16.27■□□□□ 0.2
SMARCA4-216ENST00000591545 RILPL2Q969X0 211 aa16.27■□□□□ 0.2
SMARCA4-216ENST00000591545 IQGAP2Q13576 1575 aa16.27■□□□□ 0.19
SMARCA4-216ENST00000591545 IFIT2P09913 472 aaKnown RBP16.27■□□□□ 0.19
SMARCA4-216ENST00000591545 DDX49Q9Y6V7 483 aaKnown RBP16.27■□□□□ 0.19
SMARCA4-216ENST00000591545 ANKRD30BQ9BXX2 1392 aa16.26■□□□□ 0.19
SMARCA4-216ENST00000591545 RBM42Q9BTD8 480 aaKnown RBP16.26■□□□□ 0.19
SMARCA4-216ENST00000591545 AKAP17AQ02040 695 aaKnown RBP16.26■□□□□ 0.19
SMARCA4-216ENST00000591545 SYNE3Q6ZMZ3 975 aa16.26■□□□□ 0.19
SMARCA4-216ENST00000591545 RTEL1-TNFRSF6BF6WH68 1400 aa16.26■□□□□ 0.19
SMARCA4-216ENST00000591545 GRIN2AQ12879 1464 aa16.26■□□□□ 0.19
SMARCA4-216ENST00000591545 ANKRD45Q5TZF3 282 aa16.26■□□□□ 0.19
SMARCA4-216ENST00000591545 DDX19BQ9UMR2 479 aa16.26■□□□□ 0.19
SMARCA4-216ENST00000591545 DIAPH3Q9NSV4 1193 aa16.25■□□□□ 0.19
SMARCA4-216ENST00000591545 SF3A1Q15459 793 aaKnown RBP16.25■□□□□ 0.19
SMARCA4-216ENST00000591545 HSP90AB4PQ58FF6 505 aa16.25■□□□□ 0.19
SMARCA4-216ENST00000591545 RUFY2Q8WXA3 655 aa16.25■□□□□ 0.19
SMARCA4-216ENST00000591545 AIMP1Q12904 312 aaKnown RBP16.25■□□□□ 0.19
SMARCA4-216ENST00000591545 AAMPQ13685 434 aa16.24■□□□□ 0.19
SMARCA4-216ENST00000591545 KIAA1107Q9UPP5 1409 aa16.24■□□□□ 0.19
SMARCA4-216ENST00000591545 NCBP3Q53F19 620 aaKnown RBP16.24■□□□□ 0.19
SMARCA4-216ENST00000591545 MTHFSP49914 203 aa16.24■□□□□ 0.19
SMARCA4-216ENST00000591545 FOXD4L1Q9NU39 408 aa16.23■□□□□ 0.19
SMARCA4-216ENST00000591545 URB2Q14146 1524 aaKnown RBP16.23■□□□□ 0.19
SMARCA4-216ENST00000591545 CPLX2Q6PUV4 134 aaKnown RBP16.23■□□□□ 0.19
SMARCA4-216ENST00000591545 CABP1Q9NZU7 370 aa16.23■□□□□ 0.19
SMARCA4-216ENST00000591545 MAP3K1Q13233 1512 aa16.23■□□□□ 0.19
SMARCA4-216ENST00000591545 ERBINQ96RT1 1412 aa16.22■□□□□ 0.19
SMARCA4-216ENST00000591545 REC8O95072 547 aa16.22■□□□□ 0.19
SMARCA4-216ENST00000591545 KIF6Q6ZMV9 814 aa16.22■□□□□ 0.19
SMARCA4-216ENST00000591545 SPG7Q9UQ90 795 aa16.22■□□□□ 0.19
SMARCA4-216ENST00000591545 RAD21O60216 631 aa16.22■□□□□ 0.19
SMARCA4-216ENST00000591545 EXOC6Q8TAG9 804 aa16.22■□□□□ 0.19
SMARCA4-216ENST00000591545 SUPT6HQ7KZ85 1726 aaKnown RBP16.22■□□□□ 0.19
SMARCA4-216ENST00000591545 GOLGA6L19H0YKK7 550 aa16.22■□□□□ 0.19
SMARCA4-216ENST00000591545 KIF7Q2M1P5 1343 aa16.22■□□□□ 0.19
SMARCA4-216ENST00000591545 ADGRL1O94910 1474 aa16.22■□□□□ 0.19
SMARCA4-216ENST00000591545 ARID3AQ99856 593 aa16.21■□□□□ 0.19
SMARCA4-216ENST00000591545 APPP05067 770 aa16.21■□□□□ 0.19
SMARCA4-216ENST00000591545 CCDC7Q96M83 1385 aa16.21■□□□□ 0.19
SMARCA4-216ENST00000591545 EPRSP07814 1512 aaKnown RBP16.21■□□□□ 0.19
SMARCA4-216ENST00000591545 NOL8Q76FK4 1167 aaKnown RBP16.21■□□□□ 0.19
SMARCA4-216ENST00000591545 DZIP1LQ8IYY4 767 aaKnown RBP16.21■□□□□ 0.19
SMARCA4-216ENST00000591545 CRBNQ96SW2 442 aa16.21■□□□□ 0.19
SMARCA4-216ENST00000591545 H3BQV1 296 aa16.21■□□□□ 0.18
SMARCA4-216ENST00000591545 IFFO2Q5TF58 517 aa16.21■□□□□ 0.18
SMARCA4-216ENST00000591545 CWC22Q9HCG8 908 aaKnown RBP16.2■□□□□ 0.18
SMARCA4-216ENST00000591545 DDX54Q8TDD1 881 aaKnown RBP16.2■□□□□ 0.18
SMARCA4-216ENST00000591545 CHMP5Q9NZZ3 219 aa16.2■□□□□ 0.18
SMARCA4-216ENST00000591545 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.2■□□□□ 0.18
SMARCA4-216ENST00000591545 AKNAQ7Z591 1439 aa16.2■□□□□ 0.18
SMARCA4-216ENST00000591545 A0A0U1RQG5 324 aaPredicted RBP16.19■□□□□ 0.18
SMARCA4-216ENST00000591545 CDK13Q14004 1512 aaKnown RBP16.19■□□□□ 0.18
SMARCA4-216ENST00000591545 CCDC141Q6ZP82 1450 aa16.19■□□□□ 0.18
SMARCA4-216ENST00000591545 CABP4P57796 275 aa16.19■□□□□ 0.18
SMARCA4-216ENST00000591545 PPP6R1Q9UPN7 881 aa16.19■□□□□ 0.18
SMARCA4-216ENST00000591545 COG6Q9Y2V7 657 aa16.19■□□□□ 0.18
SMARCA4-216ENST00000591545 DAPK1P53355 1430 aa16.19■□□□□ 0.18
SMARCA4-216ENST00000591545 GPS2Q13227 327 aa16.19■□□□□ 0.18
SMARCA4-216ENST00000591545 FAM184AQ8NB25 1140 aa16.19■□□□□ 0.18
SMARCA4-216ENST00000591545 CCDC30Q5VVM6 783 aa16.18■□□□□ 0.18
SMARCA4-216ENST00000591545 TCEAL9Q9UHQ7 104 aa16.18■□□□□ 0.18
SMARCA4-216ENST00000591545 ATAD2Q6PL18 1390 aa16.18■□□□□ 0.18
SMARCA4-216ENST00000591545 WDR97A6NE52 1622 aa16.18■□□□□ 0.18
SMARCA4-216ENST00000591545 BECN2A8MW95 431 aa16.18■□□□□ 0.18
SMARCA4-216ENST00000591545 WWC1Q8IX03 1113 aa16.18■□□□□ 0.18
SMARCA4-216ENST00000591545 PPP1R1BQ9UD71 204 aaPredicted RBP16.18■□□□□ 0.18
SMARCA4-216ENST00000591545 ARHGEF11O15085 1522 aa16.18■□□□□ 0.18
SMARCA4-216ENST00000591545 TPM1P09493 284 aa16.18■□□□□ 0.18
SMARCA4-216ENST00000591545 TSR1Q2NL82 804 aaKnown RBP16.18■□□□□ 0.18
SMARCA4-216ENST00000591545 TRDNQ13061 729 aa16.17■□□□□ 0.18
SMARCA4-216ENST00000591545 DENND4BO75064 1496 aaPredicted RBP16.17■□□□□ 0.18
SMARCA4-216ENST00000591545 PNISRQ8TF01 805 aaKnown RBP16.17■□□□□ 0.18
SMARCA4-216ENST00000591545 NBPF1Q3BBV0 1214 aa16.17■□□□□ 0.18
SMARCA4-216ENST00000591545 AMER1Q5JTC6 1135 aaPredicted RBP16.17■□□□□ 0.18
SMARCA4-216ENST00000591545 SLC12A5Q9H2X9 1139 aa16.17■□□□□ 0.18
SMARCA4-216ENST00000591545 PRKAR2BP31323 418 aa16.17■□□□□ 0.18
SMARCA4-216ENST00000591545 ZNF530Q6P9A1 599 aaPredicted RBP16.17■□□□□ 0.18
SMARCA4-216ENST00000591545 ZKSCAN1P17029 563 aaPredicted RBP16.16■□□□□ 0.18
SMARCA4-216ENST00000591545 CEP89Q96ST8 783 aa16.16■□□□□ 0.18
SMARCA4-216ENST00000591545 KCNH5Q8NCM2 988 aa16.16■□□□□ 0.18
SMARCA4-216ENST00000591545 DHX16O60231 1041 aaKnown RBP16.16■□□□□ 0.18
SMARCA4-216ENST00000591545 UBTFL1P0CB47 393 aaPredicted RBP16.15■□□□□ 0.18
SMARCA4-216ENST00000591545 NEUROD6Q96NK8 337 aa16.15■□□□□ 0.18
SMARCA4-216ENST00000591545 CCDC61Q9Y6R9 512 aa16.15■□□□□ 0.18
SMARCA4-216ENST00000591545 PLB1Q6P1J6 1458 aa16.15■□□□□ 0.18
SMARCA4-216ENST00000591545 FAM177BA6PVY3 158 aa16.15■□□□□ 0.18
SMARCA4-216ENST00000591545 ERC2O15083 957 aa16.15■□□□□ 0.18
SMARCA4-216ENST00000591545 CCDC70Q6NSX1 233 aa16.15■□□□□ 0.18
SMARCA4-216ENST00000591545 NAIPQ13075 1403 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms