RNA–Protein interactions for RNA: ENST00000591247.5

LSM12-204, Transcript of LSM12 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM12, Length 2,484 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM12-204ENST00000591247 PUS7Q96PZ0 661 aaKnown RBP22.55■■□□□ 1.2
LSM12-204ENST00000591247 CABP2Q9NPB3 220 aa22.54■■□□□ 1.2
LSM12-204ENST00000591247 ARHGEF40Q8TER5 1519 aa22.53■■□□□ 1.2
LSM12-204ENST00000591247 PTPRMP28827 1452 aa22.53■■□□□ 1.2
LSM12-204ENST00000591247 STAG3Q9UJ98 1225 aa22.53■■□□□ 1.2
LSM12-204ENST00000591247 SPATA31D1Q6ZQQ2 1576 aa22.52■■□□□ 1.2
LSM12-204ENST00000591247 CCDC146Q8IYE0 955 aa22.52■■□□□ 1.2
LSM12-204ENST00000591247 ZNF521Q96K83 1311 aa22.52■■□□□ 1.2
LSM12-204ENST00000591247 MORC1Q86VD1 984 aa22.51■■□□□ 1.19
LSM12-204ENST00000591247 YTHDC2Q9H6S0 1430 aaKnown RBP22.51■■□□□ 1.19
LSM12-204ENST00000591247 ALKQ9UM73 1620 aa22.51■■□□□ 1.19
LSM12-204ENST00000591247 USP32Q8NFA0 1604 aa22.5■■□□□ 1.19
LSM12-204ENST00000591247 A2ML1A8K2U0 1454 aa22.5■■□□□ 1.19
LSM12-204ENST00000591247 POLR3AO14802 1390 aaPredicted RBP22.49■■□□□ 1.19
LSM12-204ENST00000591247 TNNT2P45379 298 aaPredicted RBP22.49■■□□□ 1.19
LSM12-204ENST00000591247 ANKRD36BQ8N2N9 1353 aa22.48■■□□□ 1.19
LSM12-204ENST00000591247 CCDC136Q96JN2 1154 aa22.48■■□□□ 1.19
LSM12-204ENST00000591247 PRAM1Q96QH2 718 aa22.48■■□□□ 1.19
LSM12-204ENST00000591247 EXOC6Q8TAG9 804 aa22.47■■□□□ 1.19
LSM12-204ENST00000591247 CGNL1Q0VF96 1302 aa22.47■■□□□ 1.19
LSM12-204ENST00000591247 MINK1Q8N4C8 1332 aaPredicted RBP22.46■■□□□ 1.19
LSM12-204ENST00000591247 APAF1O14727 1248 aa22.46■■□□□ 1.19
LSM12-204ENST00000591247 DUSP27Q5VZP5 1158 aa22.46■■□□□ 1.19
LSM12-204ENST00000591247 SRPK2P78362 688 aaKnown RBP22.45■■□□□ 1.18
LSM12-204ENST00000591247 GOLGA2Q08379 1002 aa22.43■■□□□ 1.18
LSM12-204ENST00000591247 POGKQ9P215 609 aa22.43■■□□□ 1.18
LSM12-204ENST00000591247 RIMS2Q9UQ26 1411 aa22.43■■□□□ 1.18
LSM12-204ENST00000591247 SHPRHQ149N8 1683 aa22.43■■□□□ 1.18
LSM12-204ENST00000591247 PLIN1O60240 522 aa22.43■■□□□ 1.18
LSM12-204ENST00000591247 ZMYM3Q14202 1370 aa22.42■■□□□ 1.18
LSM12-204ENST00000591247 A0A1W2PP64 1363 aa22.42■■□□□ 1.18
LSM12-204ENST00000591247 SLFN5Q08AF3 891 aa22.4■■□□□ 1.18
LSM12-204ENST00000591247 NINLQ9Y2I6 1382 aa22.39■■□□□ 1.18
LSM12-204ENST00000591247 MTHFSP49914 203 aa22.39■■□□□ 1.18
LSM12-204ENST00000591247 SPINK5Q9NQ38 1064 aaPredicted RBP22.39■■□□□ 1.18
LSM12-204ENST00000591247 SETD1AO15047 1707 aaKnown RBP22.39■■□□□ 1.17
LSM12-204ENST00000591247 NSD2O96028 1365 aa22.38■■□□□ 1.17
LSM12-204ENST00000591247 TRMT2AQ8IZ69 625 aaKnown RBP22.38■■□□□ 1.17
LSM12-204ENST00000591247 ATAD2Q6PL18 1390 aa22.37■■□□□ 1.17
LSM12-204ENST00000591247 DEKP35659 375 aaKnown RBP22.37■■□□□ 1.17
LSM12-204ENST00000591247 CD163L1Q9NR16 1453 aa22.37■■□□□ 1.17
LSM12-204ENST00000591247 ABCC11Q96J66 1382 aa22.37■■□□□ 1.17
LSM12-204ENST00000591247 ESF1Q9H501 851 aaKnown RBP22.37■■□□□ 1.17
LSM12-204ENST00000591247 CDK19Q9BWU1 502 aa22.36■■□□□ 1.17
LSM12-204ENST00000591247 DMRT2Q9Y5R5 561 aa22.35■■□□□ 1.17
LSM12-204ENST00000591247 WAPLQ7Z5K2 1190 aa22.35■■□□□ 1.17
LSM12-204ENST00000591247 NRXN3Q9Y4C0 1643 aa22.34■■□□□ 1.17
LSM12-204ENST00000591247 DLC1Q96QB1 1528 aa22.34■■□□□ 1.17
LSM12-204ENST00000591247 C20orf194Q5TEA3 1177 aa22.32■■□□□ 1.16
LSM12-204ENST00000591247 CRBNQ96SW2 442 aa22.32■■□□□ 1.16
LSM12-204ENST00000591247 GGNBP2Q9H3C7 697 aa22.32■■□□□ 1.16
LSM12-204ENST00000591247 TERF2IPQ9NYB0 399 aa22.31■■□□□ 1.16
LSM12-204ENST00000591247 NGEFQ8N5V2 710 aa22.31■■□□□ 1.16
LSM12-204ENST00000591247 NOP58Q9Y2X3 529 aaKnown RBP22.3■■□□□ 1.16
LSM12-204ENST00000591247 METP08581 1390 aa22.3■■□□□ 1.16
LSM12-204ENST00000591247 NLRP1Q9C000 1473 aa22.3■■□□□ 1.16
LSM12-204ENST00000591247 FYB1O15117 783 aa22.3■■□□□ 1.16
LSM12-204ENST00000591247 RUNDC1Q96C34 613 aa22.3■■□□□ 1.16
LSM12-204ENST00000591247 CFAP53Q96M91 514 aa22.3■■□□□ 1.16
LSM12-204ENST00000591247 CABP1Q9NZU7 370 aa22.3■■□□□ 1.16
LSM12-204ENST00000591247 WWC1Q8IX03 1113 aa22.29■■□□□ 1.16
LSM12-204ENST00000591247 TNRQ92752 1358 aa22.29■■□□□ 1.16
LSM12-204ENST00000591247 E9PSI1 815 aa22.29■■□□□ 1.16
LSM12-204ENST00000591247 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.29■■□□□ 1.16
LSM12-204ENST00000591247 NKTRP30414 1462 aaKnown RBP22.28■■□□□ 1.16
LSM12-204ENST00000591247 IQSEC2Q5JU85 1478 aa22.28■■□□□ 1.16
LSM12-204ENST00000591247 RRP7AQ9Y3A4 280 aaKnown RBP22.27■■□□□ 1.16
LSM12-204ENST00000591247 TCP11L2Q8N4U5 519 aa22.26■■□□□ 1.15
LSM12-204ENST00000591247 NEUROD2Q15784 382 aa22.25■■□□□ 1.15
LSM12-204ENST00000591247 ANKRD26Q9UPS8 1709 aa22.25■■□□□ 1.15
LSM12-204ENST00000591247 HDGFL2Q7Z4V5 671 aaPredicted RBP22.25■■□□□ 1.15
LSM12-204ENST00000591247 MED14O60244 1454 aa22.24■■□□□ 1.15
LSM12-204ENST00000591247 PHF23Q9BUL5 403 aaPredicted RBP22.23■■□□□ 1.15
LSM12-204ENST00000591247 UBR1Q8IWV7 1749 aa22.23■■□□□ 1.15
LSM12-204ENST00000591247 TXNDC2Q86VQ3 553 aa22.22■■□□□ 1.15
LSM12-204ENST00000591247 U2AF1L5P0DN76 240 aaPredicted RBP22.22■■□□□ 1.15
LSM12-204ENST00000591247 U2AF1Q01081 240 aaKnown RBP eCLIP22.22■■□□□ 1.15
LSM12-204ENST00000591247 TMEM2Q9UHN6 1383 aa22.22■■□□□ 1.15
LSM12-204ENST00000591247 COL3A1P02461 1466 aaPredicted RBP22.21■■□□□ 1.15
LSM12-204ENST00000591247 BCAR3O75815 825 aa22.2■■□□□ 1.14
LSM12-204ENST00000591247 PAK3O75914 559 aaPredicted RBP22.19■■□□□ 1.14
LSM12-204ENST00000591247 HDGFP51858 240 aaKnown RBP22.19■■□□□ 1.14
LSM12-204ENST00000591247 KIF20BQ96Q89 1820 aa22.19■■□□□ 1.14
LSM12-204ENST00000591247 WASLO00401 505 aaPredicted RBP22.19■■□□□ 1.14
LSM12-204ENST00000591247 ATP7BP35670 1465 aa22.18■■□□□ 1.14
LSM12-204ENST00000591247 CEBPAP49715 358 aaPredicted RBP22.18■■□□□ 1.14
LSM12-204ENST00000591247 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.18■■□□□ 1.14
LSM12-204ENST00000591247 NBR1Q14596 966 aa22.17■■□□□ 1.14
LSM12-204ENST00000591247 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.17■■□□□ 1.14
LSM12-204ENST00000591247 KNDC1Q76NI1 1749 aa22.17■■□□□ 1.14
LSM12-204ENST00000591247 TECPR2O15040 1411 aa22.17■■□□□ 1.14
LSM12-204ENST00000591247 CCDC27Q2M243 656 aa22.16■■□□□ 1.14
LSM12-204ENST00000591247 ADGRB2O60241 1585 aa22.15■■□□□ 1.14
LSM12-204ENST00000591247 FAM135BQ49AJ0 1406 aa22.15■■□□□ 1.14
LSM12-204ENST00000591247 WDR63Q8IWG1 891 aa22.15■■□□□ 1.14
LSM12-204ENST00000591247 U2SURPO15042 1029 aaKnown RBP22.15■■□□□ 1.14
LSM12-204ENST00000591247 SIRT1Q96EB6 747 aa22.15■■□□□ 1.14
LSM12-204ENST00000591247 ADAMTS13Q76LX8 1427 aa22.14■■□□□ 1.14
LSM12-204ENST00000591247 PLEKHF1Q96S99 279 aa22.14■■□□□ 1.13
LSM12-204ENST00000591247 PPIP5K1Q6PFW1 1433 aa22.14■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms