RNA–Protein interactions for RNA: ENST00000590924.5

VAT1-208, Transcript of vesicle amine transport 1, humanhuman

TSL 3

Gene VAT1, Length 613 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-208ENST00000590924 SOS2Q07890 1332 aaPredicted RBP26.51■■□□□ 1.83
VAT1-208ENST00000590924 ORAI2Q96SN7 254 aa26.51■■□□□ 1.83
VAT1-208ENST00000590924 COL22A1Q8NFW1 1626 aaPredicted RBP26.5■■□□□ 1.83
VAT1-208ENST00000590924 FMN2Q9NZ56 1722 aa26.5■■□□□ 1.83
VAT1-208ENST00000590924 ABCC11Q96J66 1382 aa26.49■■□□□ 1.83
VAT1-208ENST00000590924 HRCP23327 699 aa26.49■■□□□ 1.83
VAT1-208ENST00000590924 MYOM2P54296 1465 aa26.49■■□□□ 1.83
VAT1-208ENST00000590924 NRXN1Q9ULB1 1477 aa26.49■■□□□ 1.83
VAT1-208ENST00000590924 RAB3GAP2Q9H2M9 1393 aa26.48■■□□□ 1.83
VAT1-208ENST00000590924 AFF2P51816 1311 aa26.47■■□□□ 1.83
VAT1-208ENST00000590924 CDK12Q9NYV4 1490 aaPredicted RBP26.47■■□□□ 1.83
VAT1-208ENST00000590924 YTHDC2Q9H6S0 1430 aaKnown RBP26.46■■□□□ 1.83
VAT1-208ENST00000590924 MARF1Q9Y4F3 1742 aaKnown RBP26.45■■□□□ 1.83
VAT1-208ENST00000590924 STK26Q9P289 416 aa26.45■■□□□ 1.82
VAT1-208ENST00000590924 RGPD8O14715 1765 aaPredicted RBP26.44■■□□□ 1.82
VAT1-208ENST00000590924 TMEM132EQ6IEE7 984 aa26.44■■□□□ 1.82
VAT1-208ENST00000590924 KIF1AQ12756 1690 aa26.43■■□□□ 1.82
VAT1-208ENST00000590924 PXDNQ92626 1479 aa26.42■■□□□ 1.82
VAT1-208ENST00000590924 RXRBP28702 533 aa26.42■■□□□ 1.82
VAT1-208ENST00000590924 WAPLQ7Z5K2 1190 aa26.42■■□□□ 1.82
VAT1-208ENST00000590924 PLEKHH1Q9ULM0 1364 aa26.42■■□□□ 1.82
VAT1-208ENST00000590924 NPHP3Q7Z494 1330 aa26.41■■□□□ 1.82
VAT1-208ENST00000590924 C8orf37Q96NL8 207 aa26.41■■□□□ 1.82
VAT1-208ENST00000590924 C14orf93Q9H972 538 aaKnown RBP26.4■■□□□ 1.82
VAT1-208ENST00000590924 ESCO1Q5FWF5 840 aa26.39■■□□□ 1.82
VAT1-208ENST00000590924 SIRT1Q96EB6 747 aa26.37■■□□□ 1.81
VAT1-208ENST00000590924 DHX57Q6P158 1386 aaKnown RBP26.35■■□□□ 1.81
VAT1-208ENST00000590924 ADAMTS2O95450 1211 aa26.35■■□□□ 1.81
VAT1-208ENST00000590924 DLC1Q96QB1 1528 aa26.34■■□□□ 1.81
VAT1-208ENST00000590924 CFAP70Q5T0N1 1121 aa26.33■■□□□ 1.81
VAT1-208ENST00000590924 NGLY1Q96IV0 654 aa26.33■■□□□ 1.81
VAT1-208ENST00000590924 FOXO3O43524 673 aa26.32■■□□□ 1.8
VAT1-208ENST00000590924 QTRT2Q9H974 415 aaKnown RBP26.32■■□□□ 1.8
VAT1-208ENST00000590924 NUTM2FA1L443 756 aa26.31■■□□□ 1.8
VAT1-208ENST00000590924 RBM6P78332 1123 aaKnown RBP26.31■■□□□ 1.8
VAT1-208ENST00000590924 ADGRB1O14514 1584 aa26.31■■□□□ 1.8
VAT1-208ENST00000590924 RGS12O14924 1447 aa26.31■■□□□ 1.8
VAT1-208ENST00000590924 ADGRB2O60241 1585 aa26.29■■□□□ 1.8
VAT1-208ENST00000590924 UPF1Q92900 1129 aaKnown RBP eCLIP26.29■■□□□ 1.8
VAT1-208ENST00000590924 TNKS1BP1Q9C0C2 1729 aaKnown RBP26.28■■□□□ 1.8
VAT1-208ENST00000590924 XPCQ01831 940 aaPredicted RBP26.27■■□□□ 1.8
VAT1-208ENST00000590924 USP32Q8NFA0 1604 aa26.26■■□□□ 1.79
VAT1-208ENST00000590924 FNBP4Q8N3X1 1017 aaPredicted RBP26.26■■□□□ 1.79
VAT1-208ENST00000590924 USP21Q9UK80 565 aa26.25■■□□□ 1.79
VAT1-208ENST00000590924 PRAM1Q96QH2 718 aa26.23■■□□□ 1.79
VAT1-208ENST00000590924 ABCA3Q99758 1704 aa26.22■■□□□ 1.79
VAT1-208ENST00000590924 SPATA31A3Q5VYP0 1347 aa26.22■■□□□ 1.79
VAT1-208ENST00000590924 TRPC5Q9UL62 973 aaPredicted RBP26.22■■□□□ 1.79
VAT1-208ENST00000590924 ATRNO75882 1429 aa26.22■■□□□ 1.79
VAT1-208ENST00000590924 PCGF6Q9BYE7 350 aa26.21■■□□□ 1.79
VAT1-208ENST00000590924 ARHGEF28Q8N1W1 1705 aaKnown RBP26.2■■□□□ 1.79
VAT1-208ENST00000590924 STAC3Q96MF2 364 aa26.2■■□□□ 1.78
VAT1-208ENST00000590924 ANKARQ7Z5J8 1434 aa26.2■■□□□ 1.78
VAT1-208ENST00000590924 BCL9LQ86UU0 1499 aa26.19■■□□□ 1.78
VAT1-208ENST00000590924 SAFB2Q14151 953 aaKnown RBP eCLIP26.19■■□□□ 1.78
VAT1-208ENST00000590924 PHF8Q9UPP1 1060 aa26.19■■□□□ 1.78
VAT1-208ENST00000590924 TNS3Q68CZ2 1445 aa26.18■■□□□ 1.78
VAT1-208ENST00000590924 POGKQ9P215 609 aa26.18■■□□□ 1.78
VAT1-208ENST00000590924 KRT28Q7Z3Y7 464 aa26.17■■□□□ 1.78
VAT1-208ENST00000590924 DCAF11Q8TEB1 546 aa26.17■■□□□ 1.78
VAT1-208ENST00000590924 TRPM3Q9HCF6 1732 aaPredicted RBP26.16■■□□□ 1.78
VAT1-208ENST00000590924 KDM2AQ9Y2K7 1162 aa26.15■■□□□ 1.78
VAT1-208ENST00000590924 NWD2Q9ULI1 1742 aa26.14■■□□□ 1.78
VAT1-208ENST00000590924 KIAA1210Q9ULL0 1709 aa26.14■■□□□ 1.78
VAT1-208ENST00000590924 TRAK1Q9UPV9 953 aa26.14■■□□□ 1.78
VAT1-208ENST00000590924 SBNO1A3KN83 1393 aa26.14■■□□□ 1.78
VAT1-208ENST00000590924 PLCH1Q4KWH8 1693 aa26.14■■□□□ 1.78
VAT1-208ENST00000590924 ITSN1Q15811 1721 aa26.14■■□□□ 1.77
VAT1-208ENST00000590924 PSME1Q06323 249 aa26.13■■□□□ 1.77
VAT1-208ENST00000590924 SLIT2O94813 1529 aa26.13■■□□□ 1.77
VAT1-208ENST00000590924 TULP4Q9NRJ4 1543 aa26.13■■□□□ 1.77
VAT1-208ENST00000590924 ALS2Q96Q42 1657 aa26.12■■□□□ 1.77
VAT1-208ENST00000590924 EIF3AQ14152 1382 aaKnown RBP26.11■■□□□ 1.77
VAT1-208ENST00000590924 ATAD2Q6PL18 1390 aa26.1■■□□□ 1.77
VAT1-208ENST00000590924 ARHGEF10O15013 1369 aa26.09■■□□□ 1.77
VAT1-208ENST00000590924 GLI3P10071 1580 aa26.08■■□□□ 1.77
VAT1-208ENST00000590924 MINK1Q8N4C8 1332 aaPredicted RBP26.07■■□□□ 1.76
VAT1-208ENST00000590924 BRWD3Q6RI45 1802 aa26.07■■□□□ 1.76
VAT1-208ENST00000590924 GJD4Q96KN9 370 aaPredicted RBP26.06■■□□□ 1.76
VAT1-208ENST00000590924 HIRIP3Q9BW71 556 aaPredicted RBP26.06■■□□□ 1.76
VAT1-208ENST00000590924 CRYBG1Q9Y4K1 1723 aa26.05■■□□□ 1.76
VAT1-208ENST00000590924 EP400Q96L91 3159 aa26.05■■□□□ 1.76
VAT1-208ENST00000590924 PMFBP1Q8TBY8 1022 aa26.05■■□□□ 1.76
VAT1-208ENST00000590924 UNC5CLQ8IV45 518 aa26.04■■□□□ 1.76
VAT1-208ENST00000590924 PRR36Q9H6K5 1346 aa26.04■■□□□ 1.76
VAT1-208ENST00000590924 WASLO00401 505 aaPredicted RBP26.03■■□□□ 1.76
VAT1-208ENST00000590924 RALGAPBQ86X10 1494 aa26.03■■□□□ 1.76
VAT1-208ENST00000590924 HAP1P54257 671 aaPredicted RBP26.02■■□□□ 1.76
VAT1-208ENST00000590924 NRAPQ86VF7 1730 aa26.02■■□□□ 1.76
VAT1-208ENST00000590924 TOPAZ1Q8N9V7 1692 aa26.01■■□□□ 1.75
VAT1-208ENST00000590924 CABLES1Q8TDN4 633 aa26.01■■□□□ 1.75
VAT1-208ENST00000590924 ATP7BP35670 1465 aa26■■□□□ 1.75
VAT1-208ENST00000590924 GPRASP1Q5JY77 1395 aa26■■□□□ 1.75
VAT1-208ENST00000590924 LMOD2Q6P5Q4 547 aa26■■□□□ 1.75
VAT1-208ENST00000590924 COL14A1Q05707 1796 aaKnown RBP25.97■■□□□ 1.75
VAT1-208ENST00000590924 PLEKHG5O94827 1062 aa25.93■■□□□ 1.74
VAT1-208ENST00000590924 VPS72Q15906 364 aa25.93■■□□□ 1.74
VAT1-208ENST00000590924 PHRF1Q9P1Y6 1649 aaKnown RBP25.92■■□□□ 1.74
VAT1-208ENST00000590924 NGDNQ8NEJ9 315 aaKnown RBP25.92■■□□□ 1.74
VAT1-208ENST00000590924 CCDC125Q86Z20 511 aa25.9■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms